Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq4583 554 1e-153 seq63621 488 2e-133 seq43996 421 2e-113 seq59810 147 6e-31 seq2280 145 2e-30 seq1272 145 2e-30 seq17562 129 2e-25 seq1857 125 2e-24 seq34978 107 6e-19 seq10757 86.0 2e-12 seq24279 84.2 6e-12 >seq4583 Length=37858 Score = 554 bits (614), Expect = 1e-153 Identities = 717/983 (73%), Gaps = 8/983 (1%) Strand=Plus/Minus Query 28638 TAACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGAT 28697 ||||||| | ||| || | ||||||||||| |||| |||||||| ||||||| Sbjct 36905 TAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGAT 36846 Query 28698 TCCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAG 28756 || | || ||| | || | |||| || ||||||| |||||||| || || |||| Sbjct 36845 CCC-TACCTTATTGACGGCAACTTCTGTATTTGTTATTGCCTTCATTGCTGCTCCTCCAG 36787 Query 28757 TTGACATTGATGGCATCCGCGAACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCA 28816 | ||||||||||| || || |||||||| | || ||| || || | ||||||||| | Sbjct 36786 TAGACATTGATGGTATTCGTGAACCTGTTTCAGGGTCTCTACTTTACGAAAACAACATTA 36727 Query 28817 TATCGGGAGCCGTCGTACCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTG 28874 | | || ||| | | || | | ||| || || || |||| || |||||||| || Sbjct 36726 TTTTCGGTGCCATTATTCCTACTTCTGCA--GCTATAGGTTTACATTTTTACCCAATCTG 36669 Query 28875 GGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTT 28934 |||||| || ||||||||||| | |||||||| || || | |||| | || | Sbjct 36668 GGAAGCGGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCT 36609 Query 28935 CCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACT 28994 |||||| | ||||||| | ||||||||| || |||||||| ||||||| || || Sbjct 36608 ACACTTCTTACTTGGCGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGCTTCCGTCT 36549 Query 28995 AGGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGT 29054 || ||| | || |||||| ||| ||||| |||||||| || ||||| || | || || Sbjct 36548 GGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCAGT 36489 Query 29055 TTTCCTCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTC 29114 |||| | |||||||| | |||||||| |||| || | |||||| | || || || Sbjct 36488 TTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTC 36429 Query 29115 AGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTT 29174 || || ||||| | |||| | || ||||| || || || ||||| || |||||||| || Sbjct 36428 TGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATT 36369 Query 29175 CCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTC 29234 |||||| | ||||| ||||| || ||||| ||||| ||||| ||||| ||||| ||||| Sbjct 36368 TCACATGTTAGGCGTAGCTGGGGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTC 36309 Query 29235 GCTTGTCACGTCCTCGCTTGTGC-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTT 29293 | || || || | | ||| | | || || || ||| | ||| || | |||| Sbjct 36308 CTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTT 36250 Query 29294 ACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGAC 29353 ||| || || ||||| ||||| |||||||| |||||||||||||| ||||| ||||| | Sbjct 36249 ACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCC 36190 Query 29354 GTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTG 29413 | |||||||||||||||||| |||||| || ||||| ||||||||||| | |||| Sbjct 36189 GATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCTTAGCTG 36130 Query 29414 CCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATC 29473 | ||||| || ||||| || ||||| | || || || | || ||||| || || | Sbjct 36129 CTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACC 36070 Query 29474 TGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTT 29533 | || ||||| || || ||||| || | | |||| | |||||||| ||||| |||| Sbjct 36069 TAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTCGTGTAATTAACACTT 36010 Query 29534 GGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTC 29593 |||||||| | |||| || |||||||| || | ||||| |||||||| |||||||||| Sbjct 36009 GGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTC 35950 Query 29594 ATAACTTCCCACTTGATCTGGCT 29616 |||||||||| || || || ||| Sbjct 35949 ATAACTTCCCTCTAGACCTAGCT 35927 >seq63621 Length=23796 Score = 488 bits (540), Expect = 2e-133 Identities = 604/822 (73%), Gaps = 6/822 (1%) Strand=Plus/Minus Query 28798 CTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG--CAGCAATGCCATCGGAC 28855 || || ||||||||||| || || || ||| | | || | | ||| || || || Sbjct 20774 CTTTACGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCA--GCTATAGGTT 20717 Query 28856 TACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGAC 28915 |||| || |||||||| |||||||| || ||||||||||| | |||||||| || | Sbjct 20716 TACATTTTTACCCAATCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGTGGTC 20657 Query 28916 CGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGT 28975 | | |||| | || | |||||| | ||||||| | ||||||||| || |||| Sbjct 20656 CTTATGAACTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGTTACATGGGTCGTGAGT 20597 Query 28976 GGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCG 29035 |||| ||||||| || || || ||| | || |||||| ||| ||||| |||||||| | Sbjct 20596 GGGAGCTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTG 20537 Query 29036 TCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGACG 29095 | ||||| || | || |||||| | |||||||| | |||||||| |||| || | Sbjct 20536 TTGCAGCTGCTACCGCAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATG 20477 Query 29096 CGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATA 29155 |||||| | || || || || || ||||| | |||| | || ||||| || || || | Sbjct 20476 GTATGCCTCTAGGAATCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACA 20417 Query 29156 ACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTAT 29215 |||| || |||||||| || |||||| | ||||| ||||| || ||||| ||||| |||| Sbjct 20416 ACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGGGTATTCGGCGGCTCCCTAT 20357 Query 29216 TTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTGC-GTGAGACGACTGAAGAC 29274 | ||||| ||||| ||||| | || || || | | ||| | | || || || ||| | Sbjct 20356 TCAGTGCTATGCATGGTTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAAT 20298 Query 29275 ATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCC 29334 ||| || | ||||||| || || ||||| ||||| |||||||| ||||||||| Sbjct 20297 GAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCC 20238 Query 29335 GCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCT 29394 ||||| ||||| ||||| || |||||||||||||||||| |||||| || ||||| Sbjct 20237 GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCG 20178 Query 29395 CTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTT 29454 ||||||||||| | ||||| ||||| || ||||| || ||||| | || || || | Sbjct 20177 TTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATC 20118 Query 29455 TCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAAT 29514 || ||||| || || || || ||||| || || ||||| || | | |||| | Sbjct 20117 AGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAG 20058 Query 29515 GGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTA 29574 |||||||| ||||| |||||||||||| | |||| || |||||||| || | ||||| Sbjct 20057 GGTCGTGTAATTAACACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTT 19998 Query 29575 ATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGCT 29616 |||||||| |||||||||||||||||||| || || || ||| Sbjct 19997 ATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCT 19956 Score = 313 bits (346), Expect = 7e-81 Identities = 403/553 (73%), Gaps = 6/553 (1%) Strand=Plus/Minus Query 29065 TACCCATTCGGTCAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTC 29124 || ||| | |||||||| |||| || | |||||| | | || || || || ||| Sbjct 21474 TAACCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTCAGAATCTCTGGTACTTTC 21415 Query 29125 AACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTG 29184 || | |||| | || ||||| || || || ||||| || |||||||| || |||||| | Sbjct 21414 AATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTA 21355 Query 29185 GGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACG 29244 ||||| ||| | || ||||| ||||| ||||| ||||| ||||| ||||| | || || Sbjct 21354 GGCGTAGCTAGGGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACT 21295 Query 29245 TCCTCGCTTGTGC-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGG 29303 || | | ||| | | || || || ||| | ||| || | ||||||| ||||| Sbjct 21294 TC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATAAAGGTTACAGATTTGG 21236 Query 29304 ACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTT 29363 ||||| ||||| |||||||| | |||||||||||| ||||| ||||| || |||||||| Sbjct 21235 TCAAGAGGAAGAAACTTATAATAGCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTT 21176 Query 29364 CCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGT 29423 |||||||||| |||||| || |||| ||||||||||| | ||||| ||||| || Sbjct 21175 CCAATATGCTAGTTTCAACAACTCTTGTTCATTACACTTCTTCTTAGCTGCTTGGCCTGT 21116 Query 29424 GGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTT 29483 ||||| || ||||| | || || || | || |||| || || || || ||||| Sbjct 21115 AGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACCTAAATGGTTT 21056 Query 29484 TAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGT 29543 || ||||| || | | |||| | |||||||| ||||| | |||||||||| | Sbjct 21055 ----TTCAACCAATCTGTAGTTGACAGTCAAGGTCGTGTAATTAACATTTGGGCTGATAT 21000 Query 29544 TCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCC 29603 |||| || |||||||| || | ||||| |||||||| ||||||||| |||||||||| Sbjct 20999 CATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTTATAACTTCCC 20940 Query 29604 ACTTGATCTGGCT 29616 || || || ||| Sbjct 20939 TCTAGACCTAGCT 20927 >seq43996 Length=12529 Score = 421 bits (466), Expect = 2e-113 Identities = 594/827 (72%), Gaps = 12/827 (1%) Strand=Plus/Minus Query 28794 TCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG--CAGCAATGCCATC 28851 ||| || || ||||||||||| || || || ||| | | || | | ||| || || Sbjct 1625 TCTACTTTACGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCA--GCTATA 1568 Query 28852 GGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGG 28911 || |||| || |||||||| |||||||| || ||||||||||| | |||||||| Sbjct 1567 GGTTTACATTTTTACCCAATCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGT 1508 Query 28912 GGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGC 28971 || || | |||| | || | |||||| | ||||||| | ||||||||| || Sbjct 1507 GGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGTTACATGGGTCGT 1448 Query 28972 GAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCT 29031 |||||||| ||||||| || || || ||| | || |||||| ||| ||||| |||||| Sbjct 1447 GAGTGGGAGCTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGATGTTGCATATTCAGCT 1388 Query 29032 CCCGTCGCAGCGGC-ATCTGCGGTTTTCCTCGTCTACCCATTCGGTCAAGGTTCTTTTAG 29090 || || ||| | || ||| || |||||| | |||||||| ||| |||| | |||| Sbjct 1387 CCAGTTGCAACTGCTATC-GCAGTTTTCTTGATCTACCCAATCGATCAATGAAGTTTTTC 1329 Query 29091 CGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGA 29150 | || | ||| || || || || || ||||| | |||| | | ||||| || Sbjct 1328 TAATAGTATTCTTTTAGGAATCTCTGGTACTTTCAATTTCATGATTATATTCCA----GA 1273 Query 29151 ACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTC 29210 || ||||| || |||||||| || |||||| | ||||| ||||| || || | ||||| Sbjct 1272 GCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGGGTATTTAGCGGCTC 1213 Query 29211 GCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTGCGTG-AGACGACTG 29269 ||||| |||| ||||| ||||| |||| | || || | ||| | || | || || Sbjct 1212 CCTATTAAGTGTTATGCATGGTTC-CTTGGTAAGTTCTAGTTTGATCATGGAAACCACAA 1154 Query 29270 AAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCG 29329 || | ||| || | |||||||| ||||| ||||| ||||| |||||||| |||| Sbjct 1153 AAAATGAATCTGTTAATGAAGGTTACAAATTTGGTCAAGAGGAAGAAACTTATAATATCG 1094 Query 29330 TAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCC 29389 |||||||||| ||||| ||||| || |||||||||||||||||| |||||| || | Sbjct 1093 TAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTTTC 1034 Query 29390 GTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGG 29449 |||| ||||||||||||| ||| ||||| || ||||| || | ||| | || || | Sbjct 1033 GTTCAATACACTTCTTCCTAATTGCTTGGCCTGTAGTAGGTATATTGTTTACCGCTTTAG 974 Query 29450 GCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACA 29509 | | || ||||| | || || || ||||| || || |||||||| | | || | Sbjct 973 GTATCAGCACTATGGCTTGCAACCTAAATGGTTTCAATTTCAACCAGTCTGTAGTTGATA 914 Query 29510 ACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTG 29569 | | |||||| ||||| |||| ||||||| | ||||||| |||||| | || | | Sbjct 913 GTCAGGATCGTGTAATTAACACTTAGGCTGATATCATCAATCGTGCTAACATTGGTATGG 854 Query 29570 AAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGCT 29616 |||| |||||||| ||||||||||||| |||||| || || || ||| Sbjct 853 AAGTTATGCATGAACGTAATGCTCATACCTTCCCTCTAGACCTAGCT 807 Score = 87.8 bits (96), Expect = 5e-13 Identities = 131/184 (71%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 28726 TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGAACCTGTC 28785 || |||||||| ||||||| || || | ||| ||||||||||| || | ||||| | Sbjct 1818 TTTATTATTGCCTTCATTGTTGCTCCTCTAGTAGACATTGATGGTATTCATTAACCTATT 1759 Query 28786 GCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGA--GCAGCA 28843 || ||| || |||||||||||||| || || || ||| | | || | | ||| Sbjct 1758 TTAGGGTCTCTACTTTATGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCA 1699 Query 28844 ATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCT 28903 || || || || | || || |||||||||||||| ||| ||||||||||| | | Sbjct 1698 --GCTATAGGTTTATATTTTTATCCAATTTGGGAAGCGGCTTCTGTTGATGAATGGTTAT 1641 Query 28904 ACAA 28907 |||| Sbjct 1640 ACAA 1637 >seq59810 Length=2273 Score = 147 bits (162), Expect = 6e-31 Identities = 210/292 (72%), Gaps = 3/292 (1%) Strand=Plus/Minus Query 29116 GGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTC 29175 || || ||||| | ||| | || ||||| || || || ||||| || |||||||| || Sbjct 514 GGTACTTTCAATTTAATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTT 455 Query 29176 CACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCG 29235 ||||| | ||| | ||||| || || ||||| ||||| ||||| ||||| | ||| Sbjct 454 CACATCTTAGGCCTAGCTGGTGTAAAAGGCGGCTCCCTATTCAGTGCTATGCATGCTTCC 395 Query 29236 CTTGTCACGTCCTCGCTTGTGC-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTTA 29294 | || || || | | ||| | | || | || ||| | ||| || | ||||| Sbjct 394 TTGGTAACTTC-TAGTTTGATCAGGGAAAGCACAGAAAATGAATCTGCTAATGAAGGTTA 336 Query 29295 CAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACG 29354 || || || ||||| ||||| ||||| || |||||||||||||| | ||| ||||| || Sbjct 335 CAGATTCGGTCAAGAGGAAGAAACTTAGAATATCGTAGCCGCTCATGCTTATTTTGGCCG 276 Query 29355 TTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTC 29406 |||||||||||||||||| |||||| || ||||| ||||| ||||| Sbjct 275 ATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTC-GTACACATCTTC 225 >seq2280 Length=1098 Score = 145 bits (160), Expect = 2e-30 Identities = 174/234 (74%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 29206 GGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTGC-GTGAGAC 29264 ||||| ||||| ||||| ||||| ||||| | || || || | | ||| | | || || Sbjct 1097 GGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTC-TAGTTTGATCAGGGAAAC 1039 Query 29265 GACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGACTTATAA 29324 || ||| | ||| || | ||||||| || | ||||| ||||| |||||||| Sbjct 1038 CACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGATCAAGAGGAAGAAACTTATAA 979 Query 29325 CATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAA 29384 |||||||||||||| ||||| ||||| | |||||||||||||||||| |||||| || Sbjct 978 TATCGTAGCCGCTCATGGTTATTTTGGCTGATTGATCTTCCAATATGCTAGTTTCAACAA 919 Query 29385 TAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTT 29438 ||||| ||||||||||| | | ||| ||||| || ||||| || ||||| Sbjct 918 CTCTCGTTCGTTACACTTCTTCTTAGTTGCTTGGCCTGTAGTAGGTATCTGGTT 865 Score = 109 bits (120), Expect = 2e-19 Identities = 95/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 29321 ATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCA 29380 |||| |||||||||||||| ||||| ||||| | |||||||||||||||||| ||||| Sbjct 830 ATAATATCGTAGCCGCTCATGGTTATTTTGGCTGATTGATCTTCCAATATGCTAGTTTCA 771 Query 29381 ATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTT 29438 | || ||||| ||||||||||| | | ||| ||||| || ||||| || ||||| Sbjct 770 ACAACTCTCGTTCGTTACACTTCTTCTTAGTTGCTTGGCCTGTAGTAGGTATCTGGTT 713 >seq1272 Length=458668 Score = 145 bits (160), Expect = 2e-30 Identities = 213/295 (72%), Gaps = 6/295 (2%) Strand=Plus/Minus Query 29116 GGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTC 29175 || || ||||| | |||| | || ||||| || || || ||||| || |||||||| || Sbjct 207412 GGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTT 207353 Query 29176 CACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCG 29235 ||||| | ||| | ||| | || || ||||| ||||| ||||| ||||| | ||| Sbjct 207352 CACATCTTAGGCCTAGCTTGTGTAAAAGGAGGCTCCCTATTCAGTGCTATGCATGCTTCC 207293 Query 29236 CTTGTCACGTCCTCGCTTGTGC-GTGAGACGACTGAAGAC--ATCT-CTCAGAACTATGG 29291 | || || || | | ||| | | || | || ||| | |||| || || | || Sbjct 207292 TTGGTAACTTC-TAGTTTGATCAGGGAAAGTACAGAAAATGAATCTGCTGCTAATGAAGG 207234 Query 29292 TTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGG 29351 ||| | ||||| ||||| ||||| |||| || |||||||||||||| | ||| ||||| Sbjct 207233 TTAAAGATTTGGTCAAGAGGAAGAAACTTGGAATATCGTAGCCGCTCATGCTTATTTTGG 207174 Query 29352 ACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTC 29406 || |||||||||||||||||| |||||| || |||||| ||||| ||||| Sbjct 207173 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCT-TACACATCTTC 207120 >seq17562 Length=33771 Score = 129 bits (142), Expect = 2e-25 Identities = 183/255 (72%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 29131 ATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTT 29190 ||| | || ||||| || || || ||||| || |||||||| || ||||| | ||| | Sbjct 25315 ATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATCTTAGGCCTA 25256 Query 29191 GCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCG 29250 ||||| || || ||||| ||||| ||||| ||||| | ||| | || || || | | Sbjct 25255 GCTGGTGTAAAAGGCGGCTCCCTATTCAGTGCTATGCATGCTTCCTTGGTAACTTC-TAG 25197 Query 29251 CTTGTGC-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGA 29309 ||| | | || | || ||| | ||| || | ||||||| || | ||||| Sbjct 25196 TTTGATCAGGGAAAGCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCAGTCAAGA 25137 Query 29310 AGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATA 29369 ||||| ||||| || |||||||||| ||| | ||| ||||| || |||||||||||||| Sbjct 25136 GGAAGAAACTTAGAATATCGTAGCCGATCATGCTTATTTTGGCCGATTGATCTTCCAATA 25077 Query 29370 TGCTTCTTTCAATAA 29384 |||| |||||| || Sbjct 25076 TGCTAGTTTCAACAA 25062 >seq1857 Length=125658 Score = 125 bits (138), Expect = 2e-24 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 29415 CTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCT 29474 |||||| || ||||| || ||||| | || || || | || ||||| || || || Sbjct 75468 CTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACCT 75527 Query 29475 GAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTG 29534 || ||||| || || ||||| || | | |||| | |||||||| ||||| ||||| Sbjct 75528 AAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTCGTGTAATTAACACTTG 75587 Query 29535 GGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCA 29594 ||||||| | ||||| |||||||| || | ||||| |||||| | ||||||||||| Sbjct 75588 GGCTGATATCATCAATTATGCTAACCTTGGTATGGAAGTTATGCATAAACGTAATGCTCA 75647 Query 29595 TAACTTCCCACTTGATCTGGCT 29616 ||||||||| || || || ||| Sbjct 75648 TAACTTCCCTCTAGACCTAGCT 75669 >seq34978 Length=12172 Score = 107 bits (118), Expect = 6e-19 Identities = 140/191 (73%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 28638 TAACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGAT 28697 ||||||| | ||| || | ||||||||||| |||| |||||||| ||||||| Sbjct 5450 TAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGAT 5391 Query 28698 TCCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAG 28756 || | || ||| | || | |||| || |||||||| |||||||| || || |||| Sbjct 5390 CCC-TACCTTATTGACGGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAG 5332 Query 28757 TTGACATTGATGGCATCCGCGAACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCA 28816 | ||||||||||| || || |||||||| | || ||| || || ||||||||||| | Sbjct 5331 TAGACATTGATGGTATTCGTGAACCTGTTTCAGGGTCTCTACTTTACGGAAACAACATTA 5272 Query 28817 TATCGGGAGCC 28827 | || || ||| Sbjct 5271 TTTCCGGTGCC 5261 >seq10757 Length=79858 Score = 86.0 bits (94), Expect = 2e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 29290 GGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTT 29349 ||||| | ||||| ||||| ||||| ||||| || ||| |||||||||| | ||| ||| Sbjct 73463 GGTTATAGATTTGGTCAAGAGGAAGAAACTTAGAATATCATAGCCGCTCATGCTTATTTT 73404 Query 29350 GGACGTTTGATCTTCCAATATGCTTCTTTCAATAA 29384 || | |||||||||||||| ||| |||||| || Sbjct 73403 GGCTGATTGATCTTCCAATAGTCTTGTTTCAACAA 73369 >seq24279 Length=4008 Score = 84.2 bits (92), Expect = 6e-12 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 29306 AAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCC 29365 |||| ||||| ||||| || |||||||||||||| | ||| ||||| || |||||||||| Sbjct 1909 AAGAGGAAGAAACTTAGAATATCGTAGCCGCTCATGCTTATTTTGGCCGATTGATCTTCC 1850 Query 29366 AATATGCTTCTTTCAATAA 29384 |||||| | |||||| || Sbjct 1849 AATATGTTAGTTTCAACAA 1831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146554719339744