Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq63531 159 4e-34 >seq63531 Length=42858 Score = 159 bits (176), Expect = 4e-34 Identities = 219/305 (72%), Gaps = 6/305 (2%) Strand=Plus/Plus Query 146924 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCT 146983 |||| ||||||||| ||||||||| ||| || ||| ||| ||||| || || Sbjct 31849 GCTCGACGTGGTTGTCGTAGACGTGGCAGTCGCCACCGGTCCACACGAAGTCGCCGACCT 31908 Query 146984 TAAGGCCGGTCACGTGGGCCAC---CATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGA 147040 || |||||| || ||| | ||||| ||| ||||||| ||| ||| ||||||| Sbjct 31909 CGAGCCCGGTC---TGCGCCGCGATCATGTGGGTCAGCAGCGCGTACGAGGCGATGTTGA 31965 Query 147041 AGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGT 147100 | ||||| || ||| ||||||| | || ||||||||||||||||||||||| |||| Sbjct 31966 ACGGGACACCGAGGAACATGTCCGCGCTCCGCTGGTACAGCTGGCACGAGAGCTTGCCGT 32025 Query 147101 CGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCG 147160 || |||| |||||| | | ||||||||| | ||||||||| |||||| || | Sbjct 32026 CGTTGACGTGGAACTGGAAGAACGCGTGGCACGGGGCCAGCGCCATCTCGGGCACCTCGG 32085 Query 147161 CGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGA 147220 || |||||| |||||||| | ||||| | | || ||||| || |||| |||| Sbjct 32086 CGACGTTCCACGCCGAGACGATGAGCCGGCGGGAGTCCGGGTTGGTCCGGATCTGCTCGA 32145 Query 147221 TAACC 147225 | ||| Sbjct 32146 TGACC 32150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583023660249600