Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_026584.1 Length=109871 Score E Sequences producing significant alignments: (Bits) Value seq63531 147 2e-30 >seq63531 Length=42858 Score = 147 bits (162), Expect = 2e-30 Identities = 231/328 (70%), Gaps = 11/328 (3%) Strand=Plus/Plus Query 97518 GCGCCCTGTATCCGGATGGCACCCCGCGCCCCCACGGGCAGGAATAACCCGTCACCCATT 97577 |||||||| | ||||| || | || ||||| |||||||| | | |||| ||| Sbjct 25842 GCGCCCTGCACGCGGATCGCCTTCGACGACCCCATCGGCAGGAAGAGCGCGTCGCCCTGC 25901 Query 97578 CCCATGAGCTGCTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTATCGGTGAGTGATGCT 97637 || ||||||| ||||| || || ||| ||||| || ||| ||||||| ||| Sbjct 25902 CCGATGAGCTTGTCGGCGCCCGGCTGGTCGAGGATGACGCGGGAGTCGGTGAC----GCT 25957 Query 97638 -GTG---GCGAACGAGAGCCTAGACGGCACGTTGGATTTGATAAGGCCTGTGACTACATC 97693 ||| ||||| | ||| | || |||||||| | ||||| ||||| ||||| || || Sbjct 25958 CGTGACCGCGAAGGCGAGGCGCGAGGGCACGTTCGCCTTGATGAGGCCGGTGACGACGTC 26017 Query 97694 CACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATACCGGCTGCGCGCGCCTTCTGGGC 97753 || ||||| ||||| |||||||||||||| || || ||||| ||||| || ||||| Sbjct 26018 GACAGAGGGTCGCTGGGTCGCCAGGACGAGGTGGATCCCGGCGGCGCGGGCGAGCTGGGT 26077 Query 97754 GATGCGGACAATGTTGGCCTCGACTTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCGAG 97813 ||||||||| || ||||||| || | | || | | ||||||||| ||||| Sbjct 26078 GATGCGGACGATCGACTCCTCGACGTCGCGC---GGGGCGACGAGCATGAGGTCCGCGAG 26134 Query 97814 TTCGTCGACCACTACCACGATGTAGGGG 97841 || ||||| || || | | ||| ||| Sbjct 26135 CTCATCGACGACGACGAGCAGGTACGGG 26162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351189698566528