Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_026594.1
Length=56537
Score E
Sequences producing significant alignments: (Bits) Value
seq63454 114 5e-21
>seq63454
Length=19053
Score = 114 bits (126), Expect = 5e-21
Identities = 200/287 (70%), Gaps = 8/287 (3%)
Strand=Plus/Plus
Query 36794 TCGTCATCACTCGCCCCGCCGTCGAGGCCGAGGAGAAGCTCGGCTACCTGCCCGGCGGCA 36853
|| || | || |||||||| |||||||||| ||| |||||| | ||||||||||
Sbjct 7260 TCATCCTGACCCGCCCCGCGGTCGAGGCCGGCGAGCGGCTCGGGTTCCTGCCCGGCACGC 7319
Query 36854 TCGAAGAGAAGATGGCTCCGTACCTGATCCCGATGCTGGACGCGGTGATCGACCTGGTTG 36913
| || ||||| | |||||||| |||| | |||||| | | ||| || | |
Sbjct 7320 TGACGGACAAGATCGACCCGTACCTCCGCCCGCTCTACGACGCGCTCAACGAGATGATGG 7379
Query 36914 GCCCGACGATGGCC---AAGCGCCTGCAGGAGACCCGCCAGCTCGAGATCGCCCCGCTGG 36970
||| | ||| | |||| |||| | || || | ||||| ||||||||||||
Sbjct 7380 ACCCCGAGCTGGTCCCGAAGCTCCTGGCCG---CCGGCACGGTCGAGGTCGCCCCGCTGG 7436
Query 36971 CCTACATGCGAGGCCGAACCTTCAACGACACGTTCCTCATCGCCGACGAGATGCAGAACG 37030
| |||||||| ||||| || | |||||| ||||| || || ||||||| |||||||
Sbjct 7437 CGTACATGCGCGGCCGGACGCTGAACGACTCGTTCGTCGTCCTCGACGAGGCGCAGAACA 7496
Query 37031 CCAC-CCCGCGACAGGCCGCGCTGCTGGTGACCCGCCTGGGCTTCGG 37076
|||| |||| | ||| | || | |||| ||||| ||||||||
Sbjct 7497 CCACGCCCGAG-CAGATGAAGATGTTCCTGACGCGCCTCGGCTTCGG 7542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 180660115811232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |