Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_026594.1 Length=56537 Score E Sequences producing significant alignments: (Bits) Value seq63454 114 5e-21 >seq63454 Length=19053 Score = 114 bits (126), Expect = 5e-21 Identities = 200/287 (70%), Gaps = 8/287 (3%) Strand=Plus/Plus Query 36794 TCGTCATCACTCGCCCCGCCGTCGAGGCCGAGGAGAAGCTCGGCTACCTGCCCGGCGGCA 36853 || || | || |||||||| |||||||||| ||| |||||| | |||||||||| Sbjct 7260 TCATCCTGACCCGCCCCGCGGTCGAGGCCGGCGAGCGGCTCGGGTTCCTGCCCGGCACGC 7319 Query 36854 TCGAAGAGAAGATGGCTCCGTACCTGATCCCGATGCTGGACGCGGTGATCGACCTGGTTG 36913 | || ||||| | |||||||| |||| | |||||| | | ||| || | | Sbjct 7320 TGACGGACAAGATCGACCCGTACCTCCGCCCGCTCTACGACGCGCTCAACGAGATGATGG 7379 Query 36914 GCCCGACGATGGCC---AAGCGCCTGCAGGAGACCCGCCAGCTCGAGATCGCCCCGCTGG 36970 ||| | ||| | |||| |||| | || || | ||||| |||||||||||| Sbjct 7380 ACCCCGAGCTGGTCCCGAAGCTCCTGGCCG---CCGGCACGGTCGAGGTCGCCCCGCTGG 7436 Query 36971 CCTACATGCGAGGCCGAACCTTCAACGACACGTTCCTCATCGCCGACGAGATGCAGAACG 37030 | |||||||| ||||| || | |||||| ||||| || || ||||||| ||||||| Sbjct 7437 CGTACATGCGCGGCCGGACGCTGAACGACTCGTTCGTCGTCCTCGACGAGGCGCAGAACA 7496 Query 37031 CCAC-CCCGCGACAGGCCGCGCTGCTGGTGACCCGCCTGGGCTTCGG 37076 |||| |||| | ||| | || | |||| ||||| |||||||| Sbjct 7497 CCACGCCCGAG-CAGATGAAGATGTTCCTGACGCGCCTCGGCTTCGG 7542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180660115811232