Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_026603.1 Length=61251 Score E Sequences producing significant alignments: (Bits) Value seq63378 149 2e-31 >seq63378 Length=15302 Score = 149 bits (164), Expect = 2e-31 Identities = 261/380 (69%), Gaps = 0/380 (0%) Strand=Plus/Plus Query 12710 ATCATGGACAACGCCCTAGCGGCGGTGAACCAAACAGCTTTCGGCCTCGACGAGGCAGCG 12769 |||||||||| |||||| | | || | || || ||||| |||| ||| ||||| Sbjct 11661 ATCATGGACAGCGCCCTGCAGTCCGTCCGCGGGACCGCCTTCGGTCTCGGCGACGCAGCT 11720 Query 12770 ACCACCGCTGCGTCTGCGGTGGCCGCCGGTATCAAGCCCGGCGAACAGTTGACGGGCTAC 12829 | || || || || ||||||||||||||||||||| | | | ||| ||| Sbjct 11721 GGCGTTGCATCGAACGCCGTCGCCGCCGGTATCAAGCCCGGCCAGGCGCTCACGAAGTAC 11780 Query 12830 CTCAAGGAGGTGGCCGACACCGCGGCAATCGCGGGCACCTCGATGGCCGACATGGGCTCG 12889 |||||| |||||| | || | ||||| || |||| | | ||| ||||||||| Sbjct 11781 CTCAAGCTCACCGCCGACGCGGCCACCATCGCTGGTGTCTCGCTCGACGAGATGGGCTCG 11840 Query 12890 ATCTTCAACAAGGTGCAGACCTCGGGTAAGGCGTTTACCGGCGATCTCAACATGCTGAGC 12949 ||| |||||||| | ||| || |||| | || | | | |||||| ||| Sbjct 11841 ATCATCAACAAGACGACCACCAGCGGCAAGGTCTACACGGACAACCTCAACCAGCTCGCT 11900 Query 12950 GACCGCGGCCTGCCGATCTTCACCTGGCTGCAGAACGAGTACAAGGTCAGCGGCGAGGAA 13009 ||||| ||| | ||||||||| ||||||||||| |||||| ||| || ||| | Sbjct 11901 GACCGGGGCATCCCGATCTTCCAGTGGCTGCAGAAGGAGTACGGCGTCTCCGCCGACAAG 11960 Query 13010 CTGTCGAAGATGGTTTCTGAGGGCAAGGTCGACGCCGCGACATTCCAGCGCGTGATTGCC 13069 || ||| |||||| || |||||||||||||| | || || |||| || || | Sbjct 11961 CTCTCGTCGATGGTCTCGCAGGGCAAGGTCGACTCGGCCACCTTCCGCAAGGTCATCGAG 12020 Query 13070 GAAAACATCGGCGGCGCAGC 13089 || |||||||||||||| || Sbjct 12021 GAGAACATCGGCGGCGCGGC 12040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 195733511551584