Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_026606.1
Length=71200
Score E
Sequences producing significant alignments: (Bits) Value
seq63545 170 9e-38
>seq63545
Length=90175
Score = 170 bits (188), Expect = 9e-38
Identities = 253/356 (71%), Gaps = 2/356 (1%)
Strand=Plus/Minus
Query 62727 TGGCCGGTGAAACCACCATAACGGTGATAGGCAATCTGACGAACGATCCCGAATTACGGT 62786
||||||| |||||| ||| |||||| | ||||| || || || || || | || |
Sbjct 74095 TGGCCGGCGAAACCGTCATCACGGTGGTGGGCAACCTCACCGCGGACCCGGAGCTGCGCT 74036
Query 62787 TCACGCCGTCCGGCAGCCCGGTGGCCAACTTCACCATTGCCAGCACCCCGCGCACGTTCG 62846
||||| | ||| | | ||||| ||||||||||| || |||||| ||||||||||
Sbjct 74035 ACACGCAGAACGGGCTCGCCGTGGCGAACTTCACCATCGCGTCCACCCCTCGCACGTTCG 73976
Query 62847 ACCGGCAGAGCAACGAGTGGAAGGACGGGGAAACCCTGTTTTTGCGCGCGAGTATCTGGC 62906
|||| ||| ||||||||||||||||| || | ||||| | || ||||| | ||||
Sbjct 73975 ACCGTCAGGCGAACGAGTGGAAGGACGGCGACGCGCTGTTCCTCCGTGCGAGCGTGTGGC 73916
Query 62907 GCGACCCCGCGGAGAACGTGGCAGAGTCCCTGACCAAGGGCATGCGCGTGATTGTGTCCG 62966
|||| ||| ||| ||||||| | || ||||| |||||| ||||| || | | |
Sbjct 73915 GCGAGTTCGCCGAGCACGTGGCGGGCTCACTGACGAAGGGCTCCCGCGTCATCGCGCAGG 73856
Query 62967 GGCGGCTCAAGTC-CCGCAGCTACGAGACCAAGGAAGGCGAAAAGCGCACGGTCATTGAG 63025
| || ||| ||| ||| |||| || | || ||| | |||||||| ||| |||
Sbjct 73855 GTCGCCTC-CGTCAGCGCTCCTACCAGGACCGTGAGGGCCAGCAGCGCACGAGCATCGAG 73797
Query 63026 CTTGAGGTGGACGAAATTGGCCCGTCTTTGCGCTATGCCAACGCCAAGGTGAACCG 63081
|| ||||| ||||| || ||||| || | ||||| || | ||| |||| | |||
Sbjct 73796 CTCGAGGTCGACGAGATCGGCCCCTCGCTCCGCTACGCGACCGCGCAGGTCACCCG 73741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 227538514637744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |