Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_026606.1 Length=71200 Score E Sequences producing significant alignments: (Bits) Value seq63545 170 9e-38 >seq63545 Length=90175 Score = 170 bits (188), Expect = 9e-38 Identities = 253/356 (71%), Gaps = 2/356 (1%) Strand=Plus/Minus Query 62727 TGGCCGGTGAAACCACCATAACGGTGATAGGCAATCTGACGAACGATCCCGAATTACGGT 62786 ||||||| |||||| ||| |||||| | ||||| || || || || || | || | Sbjct 74095 TGGCCGGCGAAACCGTCATCACGGTGGTGGGCAACCTCACCGCGGACCCGGAGCTGCGCT 74036 Query 62787 TCACGCCGTCCGGCAGCCCGGTGGCCAACTTCACCATTGCCAGCACCCCGCGCACGTTCG 62846 ||||| | ||| | | ||||| ||||||||||| || |||||| |||||||||| Sbjct 74035 ACACGCAGAACGGGCTCGCCGTGGCGAACTTCACCATCGCGTCCACCCCTCGCACGTTCG 73976 Query 62847 ACCGGCAGAGCAACGAGTGGAAGGACGGGGAAACCCTGTTTTTGCGCGCGAGTATCTGGC 62906 |||| ||| ||||||||||||||||| || | ||||| | || ||||| | |||| Sbjct 73975 ACCGTCAGGCGAACGAGTGGAAGGACGGCGACGCGCTGTTCCTCCGTGCGAGCGTGTGGC 73916 Query 62907 GCGACCCCGCGGAGAACGTGGCAGAGTCCCTGACCAAGGGCATGCGCGTGATTGTGTCCG 62966 |||| ||| ||| ||||||| | || ||||| |||||| ||||| || | | | Sbjct 73915 GCGAGTTCGCCGAGCACGTGGCGGGCTCACTGACGAAGGGCTCCCGCGTCATCGCGCAGG 73856 Query 62967 GGCGGCTCAAGTC-CCGCAGCTACGAGACCAAGGAAGGCGAAAAGCGCACGGTCATTGAG 63025 | || ||| ||| ||| |||| || | || ||| | |||||||| ||| ||| Sbjct 73855 GTCGCCTC-CGTCAGCGCTCCTACCAGGACCGTGAGGGCCAGCAGCGCACGAGCATCGAG 73797 Query 63026 CTTGAGGTGGACGAAATTGGCCCGTCTTTGCGCTATGCCAACGCCAAGGTGAACCG 63081 || ||||| ||||| || ||||| || | ||||| || | ||| |||| | ||| Sbjct 73796 CTCGAGGTCGACGAGATCGGCCCCTCGCTCCGCTACGCGACCGCGCAGGTCACCCG 73741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 227538514637744