Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_027204.1
Length=194701
Score E
Sequences producing significant alignments: (Bits) Value
seq63531 98.7 1e-15
>seq63531
Length=42858
Score = 98.7 bits (108), Expect = 1e-15
Identities = 191/277 (69%), Gaps = 4/277 (1%)
Strand=Plus/Plus
Query 176388 AGCTGTTCCTTCACCTGATCGAAGTGATTGTTATAGATGTGGGTATCACCAAGGTTGCCG 176447
||||| |||| ||||| |||| ||| |||| |||| |||| || ||| | | |
Sbjct 31833 AGCTGCTCCTCGACCTGCTCGACGTGGTTGTCGTAGACGTGGCAGTCGCCACCGGTCCAC 31892
Query 176448 ATCAGTTCCCCGACTTCCAAGCCGCATTCCAGCGCGATCAGATGTGTCAGGAGTGCGTAA 176507
| | || ||||| || | ||| | | |||||||| || ||||| || |||||
Sbjct 31893 ACGAAGTCGCCGACCTCGAGCCCGGTCTGCGCCGCGATCATGTGGGTCAGCAGCGCGTAC 31952
Query 176508 GAGGCGATGTTGAATGGAAGCCCCAAGAAGACGTCCACGGACCGCTGATTCCAAAGGCAG 176567
|||||||||||||| || | || | ||| | |||| || |||||| | | ||||
Sbjct 31953 GAGGCGATGTTGAACGGGACACCGAGGAACATGTCCGCGCTCCGCTGGTACAGCTGGCAC 32012
Query 176568 GACAGTTTCCCGTTGCGGACATAGAACTGGAA-ACCGTAGTGACACGGCGGCAAAGCCAT 176626
|| || || |||| | ||| | ||||||||| | || ||| ||||| | || |||||
Sbjct 32013 GAGAGCTTGCCGTCGTTGACGTGGAACTGGAAGAACG-CGTGGCACGGGGCCAGCGCCAT 32071
Query 176627 -TAGATCGACCGCCCCGACATTCCAAGCCGAGACCAT 176662
| | | ||| | |||| ||||| |||||||| ||
Sbjct 32072 CTCGGGC-ACCTCGGCGACGTTCCACGCCGAGACGAT 32107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622419484083840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |