Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_027365.1 Length=58076 Score E Sequences producing significant alignments: (Bits) Value seq63378 149 2e-31 >seq63378 Length=15302 Score = 149 bits (164), Expect = 2e-31 Identities = 197/270 (73%), Gaps = 10/270 (4%) Strand=Plus/Plus Query 13945 AGTACCTGAAGTTGGCGGGCGACACGGCGGCGATCGCCGG---CACGAACCTCGCCGACA 14001 ||||||| ||| | | | |||| |||| | ||||| || | || |||| ||| | Sbjct 11776 AGTACCTCAAGCTCACCGCCGACGCGGCCACCATCGCTGGTGTCTCG---CTCGACGAGA 11832 Query 14002 TGGGCGCGATCTTCAACAAG--GTCCAAACGTCGGGCAAGGCGTTCACCGACGACCTGAA 14059 ||||| ||||| |||||||| | ||| | ||||||| | ||| ||| |||| || Sbjct 11833 TGGGCTCGATCATCAACAAGACGACCACCAGC--GGCAAGGTCTACACGGACAACCTCAA 11890 Query 14060 CATGCTGTCGGATCGCGGCCTGCCGATCTTCCAGTGGCTGCAGGACGAATACCGCGTCAG 14119 | ||| | || || ||| | ||||||||||||||||||||| | || ||| ||||| Sbjct 11891 CCAGCTCGCTGACCGGGGCATCCCGATCTTCCAGTGGCTGCAGAAGGAGTACGGCGTCTC 11950 Query 14120 CGCCGAGGAACTCGGCAAGATGATTAAGGACGGCAAGGTCGACGCCGTCACGTTCCGCAA 14179 |||||| | ||| |||| | | | |||||||||||| | | ||| |||||||| Sbjct 11951 CGCCGACAAGCTCTCGTCGATGGTCTCGCAGGGCAAGGTCGACTCGGCCACCTTCCGCAA 12010 Query 14180 GGTCATCGCCGAGAACATCGGCGGCGCTGC 14209 |||||||| ||||||||||||||||| || Sbjct 12011 GGTCATCGAGGAGAACATCGGCGGCGCGGC 12040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185581192613184