Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq60999 102 4e-17 >seq60999 Length=2905 Score = 102 bits (112), Expect = 4e-17 Identities = 158/224 (71%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 65086 TCGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATT 65145 ||| || ||||| ||||||||||| |||| ||| | ||| || |||| | | | Sbjct 1787 TCGAGTGCCAAATTGACCATTTGGTTGCAATAGATTTACATTATTGCTGCCAACATAGTC 1728 Query 65146 CTGAGCCATTCCGATAAT--TGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAA 65203 || ||||| || || || |||||| | | |||| ||||| |||||||| |||| Sbjct 1727 TTGTGCCATGCCAATGATGGTGCTGC--TAAGACTCTGCTCACCATGATGATAAGCTGAG 1670 Query 65204 TGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTA 65263 || ||||||||||| ||| |||||| | ||||||| |||| | |||||| | ||| Sbjct 1669 TGCTCAGAGACATAACCAGAAAATTGGGAAACTTTTGCTTCCTTAACAAAATTCCTCTTA 1610 Query 65264 AATGCAGAATACAATATTTTCCGTAAACTAATTTTCAATCCATC 65307 |||||| | ||| || |||| | || |||||| ||||| Sbjct 1609 AATGCACAGAACAGAATCTTCCTTTGACCCGGTTTCAAACCATC 1566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235497134709600