Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq63454 98.7 1e-15
>seq63454
Length=19053
Score = 98.7 bits (108), Expect = 1e-15
Identities = 272/409 (67%), Gaps = 10/409 (2%)
Strand=Plus/Plus
Query 166101 TCGGTACTGGACCGGCCGGGACCGGTAAGACGCTCCTGGC-ATG-CAACGCCGGTTCTCA 166158
|||| | || || ||||| ||||| |||||| ||| || ||| | | | | || | |
Sbjct 7173 TCGGCATCGGCCCCGCCGGTACCGGCAAGACGTACCTCGCGATGGCGAAGGCCGTGC--A 7230
Query 166159 CGCACTGGCGACGCGCAAGGTTGAACGTCTGATCCTGACGCGACCGGCCGT-GAGCGTCG 166217
|| ||| | |||| |||| || | |||||||| || || || || ||| | ||
Sbjct 7231 GGCGCTGCAGCGGCGCGAGGTGAGCCGCATCATCCTGACCCGCCCCGCGGTCGAG-GCCG 7289
Query 166218 AGGAGCAGCACGGGTTCCTTCCCGGCAGTCTCGAGCAGAAGATGGAGCCGTGGACTCGAC 166277
|||| || ||||||||| ||||||| || | | ||||| || |||| || |
Sbjct 7290 GCGAGCGGCTCGGGTTCCTGCCCGGCACGCTGACGGACAAGATCGACCCGTACCTCCGCC 7349
Query 166278 CCATGTTCGACGCCCTGTACCGGTACATGAGCCCTAAGAAGGTTCGGGATCTCATGGAAA 166337
| | | |||||| || || | ||| ||| || ||| | | | ||| |||
Sbjct 7350 CGCTCTACGACGCGCTCAACGAGATGATGGACCCCGAGCTGGTCCCGAAGCTCCTGGCCG 7409
Query 166338 AT--CACGTCATCGAGATCTGTCCTCTGGCGTACATGCGCGGTCGGACGTTCGACAACGC 166395
|||| ||||| || || ||||||||||||||||| |||||| | || || |
Sbjct 7410 CCGGCACGG--TCGAGGTCGCCCCGCTGGCGTACATGCGCGGCCGGACGCTGAACGACTC 7467
Query 166396 CTGGATTATCGGGGATGAGATGCAGAACTCGACGCCGGGTCAGATGAAGATGCTTCTGAC 166455
| | || || ||| ||||||| | ||||| | |||||||||||| | |||||
Sbjct 7468 GTTCGTCGTCCTCGACGAGGCGCAGAACACCACGCCCGAGCAGATGAAGATGTTCCTGAC 7527
Query 166456 CCGGATCGGGGAAGGTTCGAAGATGATCGTCGCGGGTGACACGGCCCAG 166504
|| |||| || ||||||||| ||||| |||| |||| |||||
Sbjct 7528 GCGCCTCGGCTTCGGCTCGAAGATGGTCGTCACGGGGGACATCACCCAG 7576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548088283964160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |