Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq63531 89.7 4e-13 >seq63531 Length=42858 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 29957 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATG 30016 || ||||||| || || || | ||| ||||||||| || || || ||||| |||| Sbjct 31926 GCGATCATGTGGGTCAGCAGCGCGTACGAGGCGATGTTGAACGGGACACCGAGGAACATG 31985 Query 30017 TCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACAC 30076 ||| | || |||||| ||||| |||||||||| |||||| | |||| ||||| | Sbjct 31986 TCCGCGCTCCGCTGGTACAGCTGGCACGAGAGCTTGCCGTCGTTGACGTGGAACTGGAAG 32045 Query 30077 ATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACG 30136 | ||||||||||| | || ||||| | || || | |||||| || | ||| Sbjct 32046 AACGCGTGGCACGGGGCCAGCGCCATCTCGGGCACCTCGGCGACGTTCCACGCCGAGACG 32105 Query 30137 ATGATGCGCCTGTCTTCTGGGTTGTTCCTGAT 30168 |||| || | | || |||||| ||| ||| Sbjct 32106 ATGAGCCGGCGGGAGTCCGGGTTGGTCCGGAT 32137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405995141729088