Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq32996 156 3e-33
seq6347 143 2e-29
seq15487 129 4e-25
seq16715 127 1e-24
seq51266 122 5e-23
seq43689 120 2e-22
seq46021 91.5 9e-14
seq54467 89.7 3e-13
seq31566 89.7 3e-13
>seq32996
Length=3898
Score = 156 bits (172), Expect = 3e-33
Identities = 171/225 (76%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 34484 CTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTG 34543
|||| | ||||||||||||||||||||| |||||| || |||||||| |||| ||| |
Sbjct 866 CTCTCAAACGCAACACCAAATGGAGAGTTGACTCCTTCTGGATGTTATAGTCTGCAAGAG 925
Query 34544 TTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTC 34603
| | | |||| |||||||||||||| ||||| || || ||||| ||||| || || | |
Sbjct 926 TCCTCCCGTCCTCAAGTTGTTTACCAGCAAAGATCAATCGCTGCTGGTCTGGGGGAATAC 985
Query 34604 CCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCC 34662
||||||||||| ||| |||| ||| || | ||| || ||| ||||| || |||
Sbjct 986 CCTCCTTGTCT-TGAATCTTTGCTTTGACATTGTCAATGGTATCTGAACTCTCAACCTCC 1044
Query 34663 ACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
| || || || || || || || || || |||||||| ||||||
Sbjct 1045 AATGTAATTGTCTTCCCAGTCAAAGTCTTGACAAAAATTTGCATG 1089
Score = 134 bits (148), Expect = 9e-27
Identities = 116/144 (81%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | ||||||||||||||||||||| |||||| || |||||||| |||| |
Sbjct 492 CCTCCTCTCAAACGCAACACCAAATGGAGAGTTGACTCCTTCTGGATGTTATAGTCTGCA 551
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || | | |||| |||||||||||||| ||||| || || ||||| ||||| || ||
Sbjct 552 AGAGTCCTCCCGTCCTCAAGTTGTTTACCAGCAAAGATCAATCGCTGCTGGTCTGGGGGA 611
Query 34600 ACTCCCTCCTTGTCTGTGATCTTT 34623
| |||||||||||| ||||||
Sbjct 612 ATACCCTCCTTGTCTTGAATCTTT 635
Score = 134 bits (148), Expect = 9e-27
Identities = 153/203 (75%), Gaps = 2/203 (1%)
Strand=Plus/Plus
Query 34484 CTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTG 34543
|||| | ||||||||||||||||||||| |||||| || |||||||| |||| ||| |
Sbjct 661 CTCTTAAACGCAACACCAAATGGAGAGTTGACTCCTTCTGGATGTTATAGTCTGCAAGAG 720
Query 34544 TTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTC 34603
| | | |||| |||||||||||||| ||||| || |||||||| || || || || | |
Sbjct 721 TCCTCCCGTCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGCTGCTCTGGGGGAATAC 780
Query 34604 CCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCC 34662
||||||||||| ||| |||| ||| || | ||| || ||| ||||| || |||
Sbjct 781 CCTCCTTGTCT-TGAATCTTTGCTTTGACATTGTCAATGGTATCTGAACTCTCAACCTCC 839
Query 34663 ACGGTTATCGTTTTACCGGTTAA 34685
| || || || || || || ||
Sbjct 840 AATGTAATTGTCTTCCCAGTCAA 862
Score = 87.8 bits (96), Expect = 1e-12
Identities = 159/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| |||||||| || | || | || || || || || |||||||| ||||| |
Sbjct 1317 GCCACCTCTAAGGCGAAGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTAATCCGC 1376
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
| || | | || |||||||| || || ||||| || || | ||| ||||| || ||
Sbjct 1377 CAAGGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGAGG 1436
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| |||||||||||| |||| |||| |||||| | || || ||| ||||| |
Sbjct 1437 AATACCCTCCTTGTCTTGGATC-TTTGCTTTAACATTGTCGATAGTATCTGAACTCTCAA 1495
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
| |||| || || || || || || || || || ||||| || ||||||
Sbjct 1496 CCTCCAAAGTAATTGTCTTCCCTGTCAATGTCTTAACAAATATTTGCATG 1545
>seq6347
Length=16439
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | ||| | |||||||||||| ||| ||| || || || || ||||| | |
Sbjct 12561 CCTCCTCTCAAACGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATATTGTAATCAGCA 12620
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || | | || ||||| || || || ||||| ||||||||||| ||||| || ||
Sbjct 12621 AGAGTCCTACCATCCTCAAGCTGCTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGA 12680
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| || || |||||| |||| |||| || ||| || ||| |||||| || || ||
Sbjct 12681 ATCCCTTCTTTGTCTTGGATC-TTTGCCTTCACGTTATCAATGGTGTCTGAACTTTCAAC 12739
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| ||| || || || |||||||| || |||||||||||||||||
Sbjct 12740 CTCCAGGGTGATTGTCTTGCCGGTTAATGTCTTCACAAAAATCTGCAT 12787
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || || || |||| ||||||||||||||| |||||||||||||| |||||||
Sbjct 12789 CCACCCCTTAGGCGCAGCACCAAATGGAGAGTTGATTCCTTTTGAATGTTGTAATCTGCT 12848
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || | | || ||||| ||||| || ||||| || || | ||| ||||| || ||
Sbjct 12849 AGAGTCCTTCCATCCTCAAGCTGTTTCCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGG 12908
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || ||||| ||| ||| ||| | || || | ||| ||||| ||||| ||
Sbjct 12909 ATGCCTTCCTTATCT-TGAATTTTAGCCTTGACATTGTCAATGGTGTCAGAACTCTCAAC 12967
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | ||| || || || || || || || |||||||||||||||||
Sbjct 12968 CTCAAGGGTAATGGTCTTCCCTGTCAATGTCTTCACAAAAATCTGCAT 13015
Score = 111 bits (122), Expect = 1e-19
Identities = 149/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| ||| |||||| ||||| || || || | ||| || || | || ||||||||
Sbjct 13041 TGGAGGGTGGACTCCTTCTGAATATTGTAGTCAGCAAGAGTACGACCATCCTCAAGTTGC 13100
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || ||||| || || | || ||||| || || | ||||||||||| ||| |||
Sbjct 13101 TTTCCAGCAAAAATCAACCTTTGCTGGTCTGGAGGAATGCCCTCCTTGTC-CTGAATTTT 13159
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
|| ||||| | ||| |||||| ||| || || || | ||| || || || || ||
Sbjct 13160 TGCCTTAACATTGTCAATAGTGTCTGAGCTTTCAACCTCAAGGGTAATAGTCTTTCCAGT 13219
Query 34683 TAACGTTTTCACAAAAATCTGCATG 34707
|| ||||||||||| |||||||||
Sbjct 13220 CAAGGTTTTCACAAAGATCTGCATG 13244
Score = 111 bits (122), Expect = 1e-19
Identities = 149/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| ||| ||||||||| ||||| || || | || |||| | || || | |||
Sbjct 13269 TGGAGTGTGGACTCCTTTTGTATGTTGTAGTCAGCTAGAGTTCTTCCATCCTCCAACTGT 13328
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
||||||||||| || || | ||| || || || || | ||| ||||||||| ||| |||
Sbjct 13329 TTACCGGCAAAGATCAATCTCTGCTGATCTGGAGGAATTCCTTCCTTGTCTTGGAT-TTT 13387
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
|| || || | ||| ||||| |||||| || || | || || || || |||||
Sbjct 13388 TGCCTTGACATTGTCAATAGTGTCAGAGCTCTCAACCTCAAGAGTAATTGTCTTCCCGGT 13447
Query 34683 TAACGTTTTCACAAAAATCTGCATG 34707
|| ||||||||||| |||||||||
Sbjct 13448 CAAGGTTTTCACAAAGATCTGCATG 13472
Score = 96.9 bits (106), Expect = 2e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
|| || ||||||||||| || | ||| || || | || || || || ||||| |||||
Sbjct 12369 TCTTTCTGAATGTTATAGTCAGCAAGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAAA 12428
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635
|| || | ||| ||||| || || | |||||||| || ||| || | || || |
Sbjct 12429 ATCAACCTCTGCTGGTCTGGGGGGATACCCTCCTTATC-CTGAATCTTCGCCTTCACATT 12487
Query 34636 A-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694
| ||| || ||| ||||||||| |||| ||| ||||| || || || || || || ||
Sbjct 12488 ATCAATGGTATCTGAGCTCTCCACCTCCAAGGTAATCGTCTTTCCAGTCAATGTCTTGAC 12547
Query 34695 AAAAATCTGCAT 34706
||| ||||||||
Sbjct 12548 AAATATCTGCAT 12559
Score = 87.8 bits (96), Expect = 1e-12
Identities = 144/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| ||| ||||||||| ||||| || || | || |||| | || || | |||
Sbjct 13497 TGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCTAGAGTTCTTCCATCCTCTAACTGT 13556
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || ||||| || || | ||| || || || || | || ||||| ||| ||| |||
Sbjct 13557 TTCCCAGCAAAGATCAATCTCTGCTGATCTGGAGGAATCCCTTCCTTATCTTGGAT-TTT 13615
Query 34624 TGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
|| || || | ||| ||||| |||||| || || | || || || || || ||
Sbjct 13616 TGCCTTGACATTGTCAATAGTGTCAGAGCTCTCAACCTCAAGAGTAATTGTCTTCCCAGT 13675
Query 34683 TAACGTTTTCACAAAAATCTGCATG 34707
|| ||||||||||| |||||||||
Sbjct 13676 CAAGGTTTTCACAAAGATCTGCATG 13700
>seq15487
Length=17016
Score = 129 bits (142), Expect = 4e-25
Identities = 170/233 (73%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||||||||||||||||||| |||||| || |||||||| |||| |
Sbjct 16222 CCTCCTCTCAAATGCAACACCAAATGGAGAGTTAACTCCTTCTGGATGTTATAGTCTGCA 16281
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| | | | | || |||||||||||||| ||||| || ||| ||| ||||| || ||
Sbjct 16282 AGGTTCCTCCCATCCTCAAGTTGTTTACCAGCAAAAATCAAATGCTACTGGTCAGGGGGG 16341
Query 34600 A----CTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATT-GTGTCTTCGCTCT 34654
| | ||||||||||| ||| |||| ||| | | | ||| || ||| ||||
Sbjct 16342 AATACCCTCCTCCTTGTCT-TGAATCTTTGCTTTGATGTTGTCATTGGTATCTGAACTCT 16400
Query 34655 CCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
| || |||| || || || || || || | || || |||||||||||||||
Sbjct 16401 CAACCTCCAACGTAATTGTCTTCCCAGTCTAAGTCTTGACAAAAATCTGCATG 16453
Score = 84.2 bits (92), Expect = 1e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
|| || |||||||| ||||||| | || | | ||||||||||| | || |||||
Sbjct 16626 TCTTTCTGAATGTTGTAATCTGCCAAGGTCCTTCCATCTTCAAGTTGCTCTCCAGCAAAG 16685
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635
|| || | ||| |||| || || | |||||||||||| |||| |||| |||||| |
Sbjct 16686 ATCAATCTCTGCTGGTTTGGAGGAATACCCTCCTTGTCTTGGATC-TTTGCTTTAACATT 16744
Query 34636 -AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694
|| || ||| ||||| || |||| || || || || || || || || || ||
Sbjct 16745 GTTGATAGTATCTGAACTCTCAACCTCCAAAGTAATTGTCTTCCCTGTCAATGTCTTGAC 16804
Query 34695 AAAAATCTGCATG 34707
||| || ||||||
Sbjct 16805 AAATATTTGCATG 16817
>seq16715
Length=90750
Score = 127 bits (140), Expect = 1e-24
Identities = 161/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||||| || |||||| |||||| || || || ||||| | || || ||
Sbjct 55009 AGACGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATATTGTAATCAGTGAGAGTACGG 55068
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| |||||||||||||| |||||||| || | | ||| ||||| || || | ||||||
Sbjct 55069 CCATCTTCAAGTTGTTTTCCGGCAAAGATCAGTCTCTGCTGGTCTGGAGGGATGCCCTCC 55128
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||| || | |||||| | ||| |||||| || ||||| || | |||
Sbjct 55129 TTGTCCTGGATC-TTAGCCTTAACGTTGTCAATGGTGTCTGAACTTTCCACCTCAAGGGT 55187
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||||||| || || | || || || |||||||||||
Sbjct 55188 GATCGTTTTTCCAGTGAGGGTCTTGACGAAAATCTGCAT 55226
Score = 125 bits (138), Expect = 4e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | |||||| || |||||| ||| ||||||||||| ||||| |
Sbjct 66465 CCACCACGAAGACGGAGCACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCAGCG 66524
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || ||||||||||||| || |||||||| || | | || ||||| || ||
Sbjct 66525 AGGGTCCGGCCGTCTTCAAGTTGCTTGCCGGCAAAGATCAGCCTTTGCTGGTCTGGGGGG 66584
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || |||||||| |||| || | ||||| | ||| |||||| ||| |||||
Sbjct 66585 ATGCCTTCCTTGTCCTGGATC-TTAGCCTTAACATTGTCAATGGTGTCTGAGCTTTCCAC 66643
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | ||| || || || || || | ||||| ||||| ||||||||
Sbjct 66644 CTCGAGGGTGATTGTCTTTCCAGTGAGGGTTTTGACAAAGATCTGCAT 66691
Score = 100 bits (110), Expect = 2e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|| ||||| ||||||||| ||||| || || | || || | | |||||||| ||
Sbjct 65349 TGCAGAGTAGACTCCTTTTGGATGTTGTAGTCCGCCAGAGTCCTTCCATCTTCAAGCTGC 65408
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || ||||| || | | ||| ||||||||||| | |||||||||||| ||| ||
Sbjct 65409 TTCCCTGCAAAGATCAGCCTCTGCTGGTCCGGCGGGATTCCCTCCTTGTC-CTGAATCTT 65467
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| || || | ||| || || |||||||| |||| || || ||||| || ||
Sbjct 65468 AGCCTTCACATTGTCAATGGTATCAGAACTCTCCACCTCCAAAGTGATGGTTTTCCCAGT 65527
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
|| || |||||||||||||||||
Sbjct 65528 CAAGGTCTTCACAAAAATCTGCAT 65551
Score = 93.3 bits (102), Expect = 3e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||||| || |||||| |||||| || || || ||||| | || || ||
Sbjct 54806 AGACGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATATTGTAATCAGCGAGAGTACGG 54865
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| |||||||||||||| |||||||| || | | ||| ||||| || || | ||||||
Sbjct 54866 CCATCTTCAAGTTGTTTTCCGGCAAAGATCAGTCTCTGCTGGTCTGGAGGGATGCCCTCC 54925
Query 34609 TTGTCTGTGATCTT 34622
||||| ||||||
Sbjct 54926 TTGTCCTGGATCTT 54939
Score = 84.2 bits (92), Expect = 1e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574
||||||||| ||||| || || | | || | | ||||| || || || || |||||
Sbjct 53920 CTCCTTTTGGATGTTGTAGTCAGCCAAAGTCCTACCATCTTCGAGCTGCTTCCCTGCAAA 53979
Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634
|| | | ||| || || || || | |||||||||||| ||||| | ||||||
Sbjct 53980 GATCAGCCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGAATCTTG-GCCTTAACGT 54038
Query 34635 TAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693
| ||| || || ||||||| | |||| || || ||||| || || || || ||||
Sbjct 54039 TGTCAATAGTATCAGAGCTCTCCGCCTCCAAAGTGATGGTTTTCCCAGTCAAGGTCTTCA 54098
Query 34694 CAAAAATCTGCAT 34706
|||||||||||||
Sbjct 54099 CAAAAATCTGCAT 54111
>seq51266
Length=1200
Score = 122 bits (134), Expect = 5e-23
Identities = 183/256 (71%), Gaps = 7/256 (3%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | |||||||| |||||||||||| |||||| || |||| ||| |||| |
Sbjct 543 CCTCCTCTCAAACGCAACATCAAATGGAGAGTTAACTCCTTCTGGATGTAATAGTCTGCA 602
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| | | | | || |||||||| ||||| ||||| || ||| ||| ||||| || ||
Sbjct 603 AGGTTCCTCCCATCCTCAAGTTG-TTACCAGCAAAAATCAAATGCTACTGGTCAGGGGGG 661
Query 34600 A----CTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATT-GTGTCTTCGCTCT 34654
| | ||||||||||| ||| |||| ||| ||| | ||| || ||| ||||
Sbjct 662 AATACCCTCCTCCTTGTCT-TGAATCTTTGCTTTGACGTTGTCATTGGTATCTGAACTCT 720
Query 34655 CCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTG 34714
| || |||| ||||| || || || || | || || |||||||| |||||| ||
Sbjct 721 CAACCTCCAACGTTATTGTCTTCCCAGTCTAAGTCTTGACAAAAATTTGCATGCCACCTG 780
Query 34715 TATGACGTTGAAAAAG 34730
|| |||| ||| |||
Sbjct 781 TAAGACGAAGAACAAG 796
>seq43689
Length=21515
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || || || | || |||||| || || ||| |||||| |||||||| || || | |
Sbjct 2432 CCTCCCCTCAGCCTCAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGCA 2373
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | || ||||| |||||||| || || || || | ||| ||||| || ||
Sbjct 2372 AGGGTGCGGCCATCCTCAAGCTGTTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGA 2313
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| |||||||||||| |||| || | || || | ||| ||||| |||||| ||
Sbjct 2312 ATACCCTCCTTGTCTTGGATC-TTGGCCTTGACATTGTCAATGGTGTCGGAGCTCTCAAC 2254
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | |||||| || || ||||| | || || ||||||||||||||
Sbjct 2253 CTCAAGGGTTATGGTCTTCCCGGTAAGGGTCTTAACAAAAATCTGCAT 2206
Score = 104 bits (114), Expect = 1e-17
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|| |||||| |||||| || || || || || | ||| || || | |||||||| ||
Sbjct 2636 TGCAGAGTGGACTCCTTCTGGATATTGTAGTCAGCAAGGGTGCGTCCATCTTCAAGCTGC 2577
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
||||| ||||| || | | ||| ||||| || || | ||||| ||||| |||||
Sbjct 2576 TTACCAGCAAAGATCAGCCTCTGCTGGTCTGGTGGGATCCCCTCTTTGTCCTGAATCTTA 2517
Query 34624 TGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| ||| || | || ||||| |||||||| |||| ||| || || ||||||||
Sbjct 2516 -GCTTTCACATTGTCGATGGTGTCAGAACTCTCCACCTCCAAGGTGATGGTCTTACCGGT 2458
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
||| || |||||||| ||||||||
Sbjct 2457 TAAGGTCTTCACAAAGATCTGCAT 2434
Score = 95.1 bits (104), Expect = 8e-15
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||||||||||| || |||||| || ||||| ||||| | || || ||
Sbjct 1511 AGACGGAGCACCAAATGGAGGGTAGACTCCTTCTGGATGTTGTAATCAGCTAGAGTACGT 1452
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| || | || || ||||| || || | | || || ||||| || | ||| |||
Sbjct 1451 CCGTCCTCCAACTGCTTTCCGGCGAAGATAAGCCTTTGCTGATCCGGGGGAATTCCTTCC 1392
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|| || |||| || | |||||| | ||||| || || ||||| || | |||
Sbjct 1391 TTATCCTGGATC-TTGGCCTTAACGTTGTCGATTGTATCAGAACTTTCCACCTCTAGGGT 1333
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || ||||| | ||||||||||| ||||||||
Sbjct 1332 GATAGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCAT 1294
Score = 82.4 bits (90), Expect = 5e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|| || ||| |||||| || ||||| || || | || || || | || || | |||
Sbjct 2180 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGGGTGCGACCATCCTCCAATTGC 2121
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || || || || || | |||||||| || || | |||||||||||| |||| ||
Sbjct 2120 TTTCCAGCGAAGATCAACCTTTGTTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATC-TT 2062
Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| || || || ||| ||||| ||| || || |||| || || || || |||||
Sbjct 2061 AGCCTTGACATTATCAATGGTGTCGGAGCTTTCAACCTCCAAAGTGATGGTCTTTCCGGT 2002
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
| || || ||||||||||||||
Sbjct 2001 GAGGGTCTTAACAAAAATCTGCAT 1978
>seq46021
Length=44830
Score = 91.5 bits (100), Expect = 9e-14
Identities = 146/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| || |||||| || ||||| || || | |||||||| | || || || ||
Sbjct 38780 TGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCTAGTGTTCGTCCATCCTCGAGCTGC 38721
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|||||||| || || || ||||||||||| || || | || ||||||||| ||| ||
Sbjct 38720 TTACCGGCGAAAATCAATCGCTGTTGGTCTGGTGGAATGCCTTCCTTGTCT-TGAATCTT 38662
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| ||||| | ||| |||||| ||| || || | ||| || || || || ||
Sbjct 38661 AGCCTTAACATTGTCAATGGTGTCTGATGACTCTACCTCTAAGGTAATAGTCTTGCCCGT 38602
Query 34683 TAACGTTTTCACAAAAATCTGCATGTT 34709
| || |||||||| |||||||| ||
Sbjct 38601 CAGGGTCTTCACAAAGATCTGCATTTT 38575
>seq54467
Length=1408
Score = 89.7 bits (98), Expect = 3e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556
|||||||||||| || ||| || || ||||| ||||| | ||| || | | || ||
Sbjct 1195 CACCAAATGGAGGTTGGACTCTTTCTGGATGTTGTAATCAGCAAGAGTCCTACCATCCTC 1136
Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616
||| ||||| || ||||| |||||||| ||||||| | || | ||| || |||||| |
Sbjct 1135 AAGCTGTTTGCCAGCAAAAATTAAACGTTGTTGGTGCTCTGGAATTCCTTCTTTGTCT-T 1077
Query 34617 GATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675
|| |||| || || || | | | |||| || || || | | ||| || || |
Sbjct 1076 GAATCTTTGCCTTCACATTATCAGTGGCATCTTAACTTTCTACCGCTAGGGTGATTGTCT 1017
Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| ||||| || | || ||||| ||||||||
Sbjct 1016 TCCCGGTCAATATCTTAACAAAGATCTGCAT 986
>seq31566
Length=6582
Score = 89.7 bits (98), Expect = 3e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556
|||||||||||| || ||| || || ||||| ||||| | ||| || | | || ||
Sbjct 396 CACCAAATGGAGTTTGGACTCTTTCTGGATGTTGTAATCAGCAAGAGTCCTACCATCCTC 455
Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616
||| ||||| || ||||| |||||||| ||||||| | || | ||| || |||||| |
Sbjct 456 AAGCTGTTTGCCAGCAAAAATTAAACGTTGTTGGTGCTCTGGAATTCCTTCTTTGTCT-T 514
Query 34617 GATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675
|| |||| || || || | | | |||| || || || | | ||| || || |
Sbjct 515 GAATCTTTGCCTTCACATTATCAGTGGCATCTTAACTTTCTACCGCTAGGGTGATTGTCT 574
Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| ||||| || | || ||||| ||||||||
Sbjct 575 TCCCGGTCAATATCTTAACAAAGATCTGCAT 605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314485399729712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |