Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_028663.1
Length=188632
Score E
Sequences producing significant alignments: (Bits) Value
seq4583 527 8e-145
seq63621 484 8e-132
seq43996 396 3e-105
seq31160 143 3e-29
seq20317 143 3e-29
seq10597 143 3e-29
seq1857 143 3e-29
seq59810 140 4e-28
seq5030 132 6e-26
seq17562 116 4e-21
seq986 104 3e-17
seq2280 91.5 2e-13
seq34978 86.0 8e-12
>seq4583
Length=37858
Score = 527 bits (584), Expect = 8e-145
Identities = 691/954 (72%), Gaps = 2/954 (0%)
Strand=Plus/Minus
Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGT- 176205
||||| |||| ||||||||||| | ||||| || | | || || | | |||
Sbjct 36876 TTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACGGCAACTTC-TGTA 36818
Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265
||| | |||| || ||||| || || || || || || || |||||||| ||||| ||
Sbjct 36817 TTTGTTATTGCCTTCATTGCTGCTCCTCCAGTAGACATTGATGGTATTCGTGAACCTGTT 36758
Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325
|||| |||||||| || | ||||||||| || | || || | | || | ||
Sbjct 36757 TCAGGGTCTCTACTTTACGAAAACAACATTATTTTCGGTGCCATTATTCCTACTTCTGCA 36698
Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385
|| || || |||| || ||||||||||||||||| ||| | ||||| |||||| | |||
Sbjct 36697 GCTATAGGTTTACATTTTTACCCAATCTGGGAAGCGGCATCCGTTGATGAATGGTTATAC 36638
Query 176386 AATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATG 176445
|| || || || || |||| |||| | |||||| | | || | | |||||||
Sbjct 36637 AACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGTTACATG 36578
Query 176446 GGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATAC 176505
|| || | ||||| ||||| | | | || || ||||| |||||||| |||||||||
Sbjct 36577 GGTCGTGAGTGGGAGCTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATAT 36518
Query 176506 TCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCT 176565
|| || || || | || || | ||||||||| | |||| ||| | ||||||||| |
Sbjct 36517 TCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGT 36458
Query 176566 TTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAA 176625
|| ||||||||||||||||| || || || ||||| ||||| || ||| ||||||||||
Sbjct 36457 TTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAATTTCATGATTGTATTCCAG 36398
Query 176626 GCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGT 176685
|| ||||||||||| || ||||||||||| || ||| | || ||||| || || || ||
Sbjct 36397 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGGGTATTCGGC 36338
Query 176686 GGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACA 176745
|| || || ||| || ||||| || | || |||||| | | || || ||
Sbjct 36337 GGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACC 36278
Query 176746 ACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAAC 176805
|| ||||| ||||| || | ||||||| |||||| ||||| ||||| || || ||
Sbjct 36277 ACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAAT 36218
Query 176806 ATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAAC 176865
|| ||||| || || ||||| ||||| || | |||||||| |||||| |||||| |||
Sbjct 36217 ATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAAC 36158
Query 176866 TCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCA 176925
|| | | ||||||||| | || || | || || || | ||||||||||| ||
Sbjct 36157 TCTCGTTCGTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCT 36098
Query 176926 ATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTA 176985
| ||| | |||| ||||| |||||||| || |||||||| |||||||| ||||| |
Sbjct 36097 TTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTT 36038
Query 176986 GACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGT 177045
|||| ||| || ||| || |||| |||||| | |||||||| |||||||||
Sbjct 36037 GACAGTCAGGGTCGTGTAATTAACACTTGGGCTGATATCATCAACCGTGCTAACCTTGGT 35978
Query 177046 ATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCT 177099
|||||||||||||| || ||||||||||| |||||||| || ||||| ||||||
Sbjct 35977 ATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCT 35924
>seq63621
Length=23796
Score = 484 bits (536), Expect = 8e-132
Identities = 601/823 (73%), Gaps = 0/823 (0%)
Strand=Plus/Minus
Query 176277 ACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAACGCAATCGGACT 176336
||| || ||||||||||| || || || || | | || | || || || || |
Sbjct 20775 ACTTTACGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTT 20716
Query 176337 ACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGAGGACC 176396
||| || ||||||||||||||||| ||| | ||||| |||||| | ||||| || || ||
Sbjct 20715 ACATTTTTACCCAATCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGTGGTCC 20656
Query 176397 ATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATGGGACGCCAATG 176456
|| |||| |||| | |||||| | | || | | ||||||||| || | ||
Sbjct 20655 TTATGAACTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGTTACATGGGTCGTGAGTG 20596
Query 176457 GGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGT 176516
||| ||||| | | | || || ||||| |||||||| ||||||||| || || || ||
Sbjct 20595 GGAGCTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGT 20536
Query 176517 ATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTGATGG 176576
| || || | ||||||||| | |||| ||| | ||||||||| ||| ||||||||
Sbjct 20535 TGCAGCTGCTACCGCAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGG 20476
Query 176577 TATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAA 176636
||||||||| || || || ||||| ||||| || ||| |||||||||| || ||||||||
Sbjct 20475 TATGCCTCTAGGAATCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAA 20416
Query 176637 CATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTTT 176696
||| || ||||||||||| || ||| | || ||||| || || || || || || || ||
Sbjct 20415 CATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGGGTATTCGGCGGCTCCCTATT 20356
Query 176697 CTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACAACCGAAAACGA 176756
| || ||||| || | || |||||| | | || || || || ||||| ||
Sbjct 20355 CAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGA 20296
Query 176757 ATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAACATTGTAGCTGC 176816
||| || | ||||||| |||||| ||||| ||||| || || || || ||||| ||
Sbjct 20295 ATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGC 20236
Query 176817 ACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAACTCAAGAAGTCT 176876
|| ||||| ||||| || | |||||||| |||||| |||||| ||||| | |
Sbjct 20235 TCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTT 20176
Query 176877 TCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCAATGGGTGTTTG 176936
||||||||| | || || | || || || | ||||||||||| || | ||| | |
Sbjct 20175 ACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAG 20116
Query 176937 CACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAGACAACTCTGG 176996
||| ||||| |||||||| || |||||||| |||||||| ||||| | |||| ||
Sbjct 20115 CACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGG 20056
Query 176997 TAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTAT 177056
| || ||| || |||| |||||| | |||||||| ||||||||||||||||||||
Sbjct 20055 TCGTGTAATTAACACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTTAT 19996
Query 177057 GCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCT 177099
||| || ||||||||||| |||||||| || ||||| ||||||
Sbjct 19995 GCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCT 19953
Score = 320 bits (354), Expect = 2e-82
Identities = 404/555 (73%), Gaps = 4/555 (1%)
Strand=Plus/Minus
Query 176545 TATCCATTCGGTCAAGGATCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTC 176604
|| ||| | ||||||||| ||| ||||||||||||||||| | || || ||||| |||
Sbjct 21474 TAACCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTCAGAATCTCTGGTACTTTC 21415
Query 176605 AACTTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCACCCATTCCATATGCTT 176664
|| || ||| |||||||||| || ||||||||||| || ||||||||||| || ||| |
Sbjct 21414 AATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTA 21355
Query 176665 GGAGTAGCAGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACT 176724
|| ||||| | || || || || || || ||| || ||||| || | || |||
Sbjct 21354 GGCGTAGCTAGGGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACT 21295
Query 176725 TCTTCACTTGTTAGAGAGACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGA 176784
||| | | || || || || ||||| ||||| || | ||||||| ||| ||
Sbjct 21294 TCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATAAAGGTTACAGATTTGGT 21235
Query 176785 CAAGAAGAAGAGACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTC 176844
||||| ||||| || || || | ||||| || || ||||| ||||| || | ||||||
Sbjct 21234 CAAGAGGAAGAAACTTATAATAGCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTC 21175
Query 176845 CAGTATGCTTCTTTCAATAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTT 176904
|| |||||| |||||| ||||| | | ||||||||| | || || | || ||
Sbjct 21174 CAATATGCTAGTTTCAACAACTCTTGTTCATTACACTTCTTCTTAGCTGCTTGGCCTGTA 21115
Query 176905 GTTTGCATCTGGTTTACTGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTC 176964
|| | ||||||||||| || | ||| | |||| |||| |||||||| || |||||
Sbjct 21114 GTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACCTAAATGGTTT- 21056
Query 176965 AACTTCAACCAGTCTGTCTTAGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATC 177024
|||||||| ||||| | |||| ||| || ||| | |||| ||||||
Sbjct 21055 ---TTCAACCAATCTGTAGTTGACAGTCAAGGTCGTGTAATTAACATTTGGGCTGATATC 20999
Query 177025 CTTAACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCA 177084
| |||||||| ||||||||||||||||||||||| || ||||||||| | ||||||||
Sbjct 20998 ATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTTATAACTTCCCT 20939
Query 177085 CTTGACCTTGCTGCT 177099
|| ||||| ||||||
Sbjct 20938 CTAGACCTAGCTGCT 20924
>seq43996
Length=12529
Score = 396 bits (438), Expect = 3e-105
Identities = 590/834 (71%), Gaps = 6/834 (1%)
Strand=Plus/Minus
Query 176267 CAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAACG 176326
|||| |||||||| || ||||||||||| || || || || | | || | || |
Sbjct 1632 CAGGGTCTCTACTTTACGGAAACAACATTATTTCCGGTGCCATTATTCCTACTTCTGCAG 1573
Query 176327 CAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACA 176386
| || || |||| || ||||||||||||||||| ||| | ||||| |||||| | ||||
Sbjct 1572 CTATAGGTTTACATTTTTACCCAATCTGGGAAGCGGCATCCGTTGATGAATGGTTATACA 1513
Query 176387 ATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATGG 176446
| || || || || |||| |||| | |||||| | | || | | ||||||||
Sbjct 1512 ACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGTTACATGG 1453
Query 176447 GACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATACT 176506
| || | ||||| ||||| | | | || || ||||| |||||||| ||||||||| |
Sbjct 1452 GTCGTGAGTGGGAGCTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGATGTTGCATATT 1393
Query 176507 CTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTT 176566
| || ||||| | | || || ||||||||| | |||| ||| ||| |||| || ||
Sbjct 1392 CAGCTCCAGTTGCAACTGCTATCGCAGTTTTCTTGATCTACCCAATCGATCAATGAAGTT 1333
Query 176567 TCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAAG 176626
| ||| || |||| | | | || || || ||||| ||||| || ||| || |||||
Sbjct 1332 TTTCTAATAGTATTCTTTTAGGAATCTCTGGTACTTTCAATTTCATGATTATATTC---- 1277
Query 176627 CAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGTG 176686
||||||||||||| || ||||||||||| || ||| | || ||||| || || ||| | |
Sbjct 1276 CAGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGGGTATTTAGCG 1217
Query 176687 GATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACAA 176746
| || || || | ||||| || | || | |||| | | | || || |
Sbjct 1216 GCTCCCTATTAAGTGTTATGCATGGTTCCTTGGTAAGTTCTAGTTTGATCATGGAAACCA 1157
Query 176747 CCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAACA 176806
| |||| ||||| || | ||||||||||| || ||||| ||||| || || || |
Sbjct 1156 CAAAAAATGAATCTGTTAATGAAGGTTACAAATTTGGTCAAGAGGAAGAAACTTATAATA 1097
Query 176807 TTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAACT 176866
| ||||| || || ||||| ||||| || | |||||||| |||||| |||||| ||||
Sbjct 1096 TCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACT 1037
Query 176867 CAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCAA 176926
| | ||||||||||| || | || || || | || | |||||| ||
Sbjct 1036 TTCGTTCAATACACTTCTTCCTAATTGCTTGGCCTGTAGTAGGTATATTGTTTACCGCTT 977
Query 176927 TGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAG 176986
| ||| | |||| ||||| | |||||| || |||||||| |||||||||||||| | |
Sbjct 976 TAGGTATCAGCACTATGGCTTGCAACCTAAATGGTTTCAATTTCAACCAGTCTGTAGTTG 917
Query 176987 ACAACTCTGG-TAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGT 177045
| | || || | || ||| || | || |||||| | || ||||| ||| |||||
Sbjct 916 A-TAGTCAGGATCGTGTAATTAACACTTAGGCTGATATCATCAATCGTGCTAACATTGGT 858
Query 177046 ATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCT 177099
|||||||||||||| || ||||||||||| | |||||| || ||||| ||||||
Sbjct 857 ATGGAAGTTATGCATGAACGTAATGCTCATACCTTCCCTCTAGACCTAGCTGCT 804
>seq31160
Length=14194
Score = 143 bits (158), Expect = 3e-29
Identities = 205/287 (71%), Gaps = 4/287 (1%)
Strand=Plus/Plus
Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCATACCGTCAGAGAGATACCGTGGTCG 19354
||||||||| | || || || ||||| ||| | || | || || | | ||| || ||
Sbjct 8049 ACCTGTAACTATTCAATACCCCTACGAAAAATTGATCACATCGGAACGTTTCCGAGGCCG 8108
Query 19355 TATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTAT 19414
||||||| ||| ||||| || || || || ||||| || ||||| | ||||| |||||
Sbjct 8109 AATACACTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTGCGTGTATGTCCTAT 8168
Query 19415 CAATCTACCAGTGGTGGATTGGGTGATGAACAAACAGACAAAG--AAGAAAGAACTTAGA 19472
|| |||| || || |||||| | || | ||| || | |||||| | |
Sbjct 8169 AGATTTACCCGTTGTTGATTGGAAGTTGGA--AACTGATATTCGAAAGAAACGATTGCTT 8226
Query 19473 AATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCCCA 19532
||||| || || |||||| ||||| || || ||||| ||||| ||||||||||||
Sbjct 8227 AATTACAGTATTGATTTTGGAATCTGTATATTTTGTGGTAATTGCGTTGAGTATTGCCCA 8286
Query 19533 ACAAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGA 19579
||||| ||| |||| ||||| |||||||||||| | |||| | |||
Sbjct 8287 ACAAATTGTTTATCAATGACCGAAGAATATGAACTTTCTACTTATGA 8333
>seq20317
Length=49399
Score = 143 bits (158), Expect = 3e-29
Identities = 205/287 (71%), Gaps = 4/287 (1%)
Strand=Plus/Minus
Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCATACCGTCAGAGAGATACCGTGGTCG 19354
||||||||| | || || || ||||| ||| | || | || || | | ||| || ||
Sbjct 48175 ACCTGTAACTATTCAATACCCCTACGAAAAATTGATCACATCGGAACGTTTCCGAGGCCG 48116
Query 19355 TATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTAT 19414
||||||| ||| ||||| || || || || ||||| || ||||| | ||||| |||||
Sbjct 48115 AATACACTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTGCGTGTATGTCCTAT 48056
Query 19415 CAATCTACCAGTGGTGGATTGGGTGATGAACAAACAGACAAAG--AAGAAAGAACTTAGA 19472
|| |||| || || |||||| | || | ||| || | |||||| | |
Sbjct 48055 AGATTTACCCGTTGTTGATTGGAAGTTGGA--AACTGATATTCGAAAGAAACGATTGCTT 47998
Query 19473 AATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCCCA 19532
||||| || || |||||| ||||| || || ||||| ||||| ||||||||||||
Sbjct 47997 AATTACAGTATTGATTTTGGAATCTGTATATTTTGTGGTAATTGCGTTGAGTATTGCCCA 47938
Query 19533 ACAAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGA 19579
||||| ||| |||| ||||| |||||||||||| | |||| | |||
Sbjct 47937 ACAAATTGTTTATCAATGACCGAAGAATATGAACTTTCTACTTATGA 47891
>seq10597
Length=5227
Score = 143 bits (158), Expect = 3e-29
Identities = 205/287 (71%), Gaps = 4/287 (1%)
Strand=Plus/Minus
Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCATACCGTCAGAGAGATACCGTGGTCG 19354
||||||||| | || || || ||||| ||| | || | || || | | ||| || ||
Sbjct 5062 ACCTGTAACTATTCAATACCCCTACGAAAAATTGATCACATCGGAACGTTTCCGAGGCCG 5003
Query 19355 TATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTAT 19414
||||||| ||| ||||| || || || || ||||| || ||||| | ||||| |||||
Sbjct 5002 AATACACTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTGCGTGTATGTCCTAT 4943
Query 19415 CAATCTACCAGTGGTGGATTGGGTGATGAACAAACAGACAAAG--AAGAAAGAACTTAGA 19472
|| |||| || || |||||| | || | ||| || | |||||| | |
Sbjct 4942 AGATTTACCCGTTGTTGATTGGAAGTTGGA--AACTGATATTCGAAAGAAACGATTGCTT 4885
Query 19473 AATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCCCA 19532
||||| || || |||||| ||||| || || ||||| ||||| ||||||||||||
Sbjct 4884 AATTACAGTATTGATTTTGGAATCTGTATATTTTGTGGTAATTGCGTTGAGTATTGCCCA 4825
Query 19533 ACAAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGA 19579
||||| ||| |||| ||||| |||||||||||| | |||| | |||
Sbjct 4824 ACAAATTGTTTATCAATGACCGAAGAATATGAACTTTCTACTTATGA 4778
>seq1857
Length=125658
Score = 143 bits (158), Expect = 3e-29
Identities = 145/189 (77%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 176911 ATCTGGTTTACTGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTC 176970
||||||||||| || | ||| | |||| ||||| |||||||| || |||||||| |||
Sbjct 75484 ATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTC 75543
Query 176971 AACCAGTCTGTCTTAGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAAC 177030
||||| ||||| | |||| ||| || ||| || |||| |||||| | ||
Sbjct 75544 AACCAATCTGTAGTTGACAGTCAGGGTCGTGTAATTAACACTTGGGCTGATATCATCAAT 75603
Query 177031 CGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGAC 177090
||| ||||||||||||||||||||||| | ||||||||||| |||||||| || |||
Sbjct 75604 TATGCTAACCTTGGTATGGAAGTTATGCATAAACGTAATGCTCATAACTTCCCTCTAGAC 75663
Query 177091 CTTGCTGCT 177099
|| ||||||
Sbjct 75664 CTAGCTGCT 75672
>seq59810
Length=2273
Score = 140 bits (154), Expect = 4e-28
Identities = 194/272 (71%), Gaps = 0/272 (0%)
Strand=Plus/Minus
Query 176596 GGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCACCCATTC 176655
||||| ||||| || ||| |||||||||| || ||||||||||| || |||||||||||
Sbjct 514 GGTACTTTCAATTTAATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTT 455
Query 176656 CATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCACGGAAGT 176715
|| || | || |||| ||||| || || || || ||| || ||||| |
Sbjct 454 CACATCTTAGGCCTAGCTGGTGTAAAAGGCGGCTCCCTATTCAGTGCTATGCATGCTTCC 395
Query 176716 CTTGTTACTTCTTCACTTGTTAGAGAGACAACCGAAAACGAATCACAAAACTACGGTTAC 176775
| || |||||| | | || || | || ||||| ||||| || | ||||||
Sbjct 394 TTGGTAACTTCTAGTTTGATCAGGGAAAGCACAGAAAATGAATCTGCTAATGAAGGTTAC 335
Query 176776 AAATTCGGACAAGAAGAAGAGACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGT 176835
| |||||| ||||| ||||| || || || || ||||| || || | ||| ||||| ||
Sbjct 334 AGATTCGGTCAAGAGGAAGAAACTTAGAATATCGTAGCCGCTCATGCTTATTTTGGCCGA 275
Query 176836 CTTATCTTCCAGTATGCTTCTTTCAATAACTC 176867
| |||||||| |||||| |||||| |||||
Sbjct 274 TTGATCTTCCAATATGCTAGTTTCAACAACTC 243
>seq5030
Length=106456
Score = 132 bits (146), Expect = 6e-26
Identities = 193/271 (71%), Gaps = 4/271 (1%)
Strand=Plus/Minus
Query 19311 TATCCTTACGAGAAACTCATACCGTCAGAGAGATACCGTGGTCGTATACACTATGAGTTT 19370
|| || ||||| ||| | || | || || | | ||| || || ||||||| ||| |||
Sbjct 82605 TACCCCTACGAAAAATTGATCACATCGGAACGTTTCCGAGGCCGAATACACTTTGAATTT 82546
Query 19371 GACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTATCAATCTACCAGTGGTG 19430
|| || || || || ||||| || ||||| | ||||| ||||| || |||| || ||
Sbjct 82545 GATAAATGCATTGCTTGTGAAGTATGTGTGCGTGTATGTCCTATAGATTTACCCGTTGTT 82486
Query 19431 GATTGGGTGATGAACAAACAGACAAAG--AAGAAAGAACTTAGAAATTATTCGATAGACT 19488
|||||| | || | ||| || | |||||| | | ||||| || || |
Sbjct 82485 GATTGGAAGTTGGA--AACTGATATTCGAAAGAAACGATTGCTTAATTACAGTATTGATT 82428
Query 19489 TTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCCCAACAAACTGTCTATCCA 19548
||||| ||||| || || ||||| ||||| ||||||||||||||||| ||| |||| |
Sbjct 82427 TTGGAATCTGTATATTTTGTGGTAATTGCGTTGAGTATTGCCCAACAAATTGTTTATCAA 82368
Query 19549 TGACAGAAGAATATGAATTGGCTACATTTGA 19579
|||| |||||||||||| | |||| | |||
Sbjct 82367 TGACCGAAGAATATGAACTTTCTACTTATGA 82337
>seq17562
Length=33771
Score = 116 bits (128), Expect = 4e-21
Identities = 180/257 (70%), Gaps = 0/257 (0%)
Strand=Plus/Minus
Query 176611 ATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTA 176670
||| |||||||||| || ||||||||||| || ||||||||||| || || | || ||
Sbjct 25315 ATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATCTTAGGCCTA 25256
Query 176671 GCAGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCA 176730
|| ||||| || || || || ||| || ||||| | | || ||||||
Sbjct 25255 GCTGGTGTAAAAGGCGGCTCCCTATTCAGTGCTATGCATGCTTCCTTGGTAACTTCTAGT 25196
Query 176731 CTTGTTAGAGAGACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAA 176790
| | || || | || ||||| ||||| || | ||||||| |||| | |||||
Sbjct 25195 TTGATCAGGGAAAGCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCAGTCAAGAG 25136
Query 176791 GAAGAGACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTAT 176850
||||| || || || || ||||| | || | ||| ||||| || | |||||||| |||
Sbjct 25135 GAAGAAACTTAGAATATCGTAGCCGATCATGCTTATTTTGGCCGATTGATCTTCCAATAT 25076
Query 176851 GCTTCTTTCAATAACTC 176867
||| |||||| |||||
Sbjct 25075 GCTAGTTTCAACAACTC 25059
>seq986
Length=74774
Score = 104 bits (114), Expect = 3e-17
Identities = 119/160 (74%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 176439 TTACATGGGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGT 176498
||||||||| || | ||||| ||||| | | | || || |||| |||||||| |||
Sbjct 26868 TTACATGGGTCGTGAGTGGGAGCTTAGCTTCTGTCTGGGTGTGCGACCTTGGATTGCTGT 26927
Query 176499 TGCATACTCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCA 176558
|||||| || || || || | | || | |||||||| | |||| ||| |||||||
Sbjct 26928 TGCATATTCAGCTCCTGTTGCAACTGCTACCACAGTTTTCTTGATCTACCCAATCGGTCA 26987
Query 176559 AGGATCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGT 176598
|||| ||| ||||||||||||||||| || | ||||||
Sbjct 26988 AGGAAGTTTTTCTGATGGTATGCCTCTAGGAACGTCAGGT 27027
>seq2280
Length=1098
Score = 91.5 bits (100), Expect = 2e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 176737 AGAGAGACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAG 176796
|| || || || ||||| ||||| || | ||||||| ||||| ||||| |||||
Sbjct 1046 AGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGATCAAGAGGAAGAA 987
Query 176797 ACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCT 176856
|| || || || ||||| || || ||||| ||||| | | |||||||| |||||| |
Sbjct 986 ACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCTGATTGATCTTCCAATATGCTAGT 927
Query 176857 TTCAATAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGG 176916
||||| ||||| | | ||||||||| | | || | || || || | ||||||
Sbjct 926 TTCAACAACTCTCGTTCGTTACACTTCTTCTTAGTTGCTTGGCCTGTAGTAGGTATCTGG 867
Query 176917 TTTACTGC 176924
||||| ||
Sbjct 866 TTTACCGC 859
>seq34978
Length=12172
Score = 86.0 bits (94), Expect = 8e-12
Identities = 117/161 (73%), Gaps = 2/161 (1%)
Strand=Plus/Minus
Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGT- 176205
||||| |||| ||||||||||| | ||||| || | | || || | | |||
Sbjct 5421 TTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACGGCAACTTC-TGTA 5363
Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265
||||| |||| || ||||| || || || || || || || |||||||| ||||| ||
Sbjct 5362 TTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGACATTGATGGTATTCGTGAACCTGTT 5303
Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGC 176306
|||| |||||||| || ||||||||||| || || || ||
Sbjct 5302 TCAGGGTCTCTACTTTACGGAAACAACATTATTTCCGGTGC 5262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 603014139156480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |