Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_028759.1 Length=58065 Score E Sequences producing significant alignments: (Bits) Value seq63378 163 1e-35 >seq63378 Length=15302 Score = 163 bits (180), Expect = 1e-35 Identities = 212/293 (72%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 10672 GGTATCAAGCCGGGCGAGCAACTGACCAAGTACCTGTCGCTGACCGCCGACACGGCCGCG 10731 ||||||||||| ||| || || || |||||||| ||| ||||||||| ||||| | Sbjct 11748 GGTATCAAGCCCGGCCAGGCGCTCACGAAGTACCTCAAGCTCACCGCCGACGCGGCCACC 11807 Query 10732 ATCGCCGGTACGAGCCTCGACGAAATGGGCTCGATCTTCAACAAGGTGCAGGGCTCGGGC 10791 ||||| ||| |||||||| |||||||||||| |||||||| | | ||| Sbjct 11808 ATCGCTGGTGTCTCGCTCGACGAGATGGGCTCGATCATCAACAAGACGACCACCAGCGGC 11867 Query 10792 AAGGCGATGACGTTGGAGCTTCGCCAGCTCGCCGACCGCGGTCTGCCGATCTTCCAATGG 10851 |||| ||| | || ||||||||| ||||| || | ||||||||||| ||| Sbjct 11868 AAGGTCTACACGGACAACCTCAACCAGCTCGCTGACCGGGGCATCCCGATCTTCCAGTGG 11927 Query 10852 CTGCAGGACGAGTTCCACGTCAGCGGCGACGCGCTGCAGGACATGGTCGCGCAGGGCGCG 10911 |||||| | |||| | |||| || |||| ||| | |||||| |||||||| | Sbjct 11928 CTGCAGAAGGAGTACGGCGTCTCCGCCGACAAGCTCTCGTCGATGGTCTCGCAGGGCAAG 11987 Query 10912 GTCGACTCTGAGACTTTCCGCCGGGTGATCGAGAAGAATATCGGCGGCGCCGC 10964 |||||||| | || |||||| ||| |||||| |||| ||||||||||| || Sbjct 11988 GTCGACTCGGCCACCTTCCGCAAGGTCATCGAGGAGAACATCGGCGGCGCGGC 12040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185546019224736