Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_028846.1
Length=61081
Score E
Sequences producing significant alignments: (Bits) Value
seq63378 163 1e-35
>seq63378
Length=15302
Score = 163 bits (180), Expect = 1e-35
Identities = 264/380 (69%), Gaps = 0/380 (0%)
Strand=Plus/Plus
Query 12719 ATCATGGACAACGCCCTCGCGGCGGTGAACCAAACAGCTTTCGGCCTCGACGAGGCAGCT 12778
|||||||||| |||||| | | || | || || ||||| |||| ||| ||||||
Sbjct 11661 ATCATGGACAGCGCCCTGCAGTCCGTCCGCGGGACCGCCTTCGGTCTCGGCGACGCAGCT 11720
Query 12779 ACCACCGCTGCGTCTGCGGTGGCCGCCGGTATCAAGCCCGGCGAACAGTTGACGGGTTAC 12838
| || || || || ||||||||||||||||||||| | | | ||| |||
Sbjct 11721 GGCGTTGCATCGAACGCCGTCGCCGCCGGTATCAAGCCCGGCCAGGCGCTCACGAAGTAC 11780
Query 12839 CTCAAGGAGGTGGCCGACACCGCGGCAATCGCGGGCACCTCGATGGCCGACATGGGCTCG 12898
|||||| |||||| | || | ||||| || |||| | | ||| |||||||||
Sbjct 11781 CTCAAGCTCACCGCCGACGCGGCCACCATCGCTGGTGTCTCGCTCGACGAGATGGGCTCG 11840
Query 12899 ATCTTCAACAAGGTGCAGACGTCGGGCAAGGCGTTTACCGGCGACCTCAACATGCTGAGC 12958
||| |||||||| | || ||||||| | || | | |||||||| |||
Sbjct 11841 ATCATCAACAAGACGACCACCAGCGGCAAGGTCTACACGGACAACCTCAACCAGCTCGCT 11900
Query 12959 GACCGCGGCCTGCCGATCTTCACGTGGCTGCAGAACGAGTACAAGGTCAGCGGCGAGGAA 13018
||||| ||| | ||||||||| |||||||||||| |||||| ||| || ||| |
Sbjct 11901 GACCGGGGCATCCCGATCTTCCAGTGGCTGCAGAAGGAGTACGGCGTCTCCGCCGACAAG 11960
Query 13019 CTGTCGAAGATGGTTTCTGAGGGCAAGGTCGACGCCGCGACATTCCAGCGCGTGATTGCC 13078
|| ||| |||||| || |||||||||||||| | || || |||| || || |
Sbjct 11961 CTCTCGTCGATGGTCTCGCAGGGCAAGGTCGACTCGGCCACCTTCCGCAAGGTCATCGAG 12020
Query 13079 GAAAACATCGGCGGCGCAGC 13098
|| |||||||||||||| ||
Sbjct 12021 GAGAACATCGGCGGCGCGGC 12040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 195189922821024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |