Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_028979.1 Length=57253 Score E Sequences producing significant alignments: (Bits) Value seq63378 147 8e-31 >seq63378 Length=15302 Score = 147 bits (162), Expect = 8e-31 Identities = 194/268 (72%), Gaps = 6/268 (2%) Strand=Plus/Plus Query 13955 AGTACCTGAAGCTGGCGGGTGACACGGCGGCGATCGCCGG---CACGAACCTCGCCGACA 14011 ||||||| ||||| | | ||| |||| | ||||| || | || |||| ||| | Sbjct 11776 AGTACCTCAAGCTCACCGCCGACGCGGCCACCATCGCTGGTGTCTCG---CTCGACGAGA 11832 Query 14012 TGGGCGCGATCTTCAACAAGGTGCAAACGTCGGGCAAGGCGTTCACCGACGACCTGAACA 14071 ||||| ||||| |||||||| | || ||||||| | ||| ||| |||| ||| Sbjct 11833 TGGGCTCGATCATCAACAAGACGACCACCAGCGGCAAGGTCTACACGGACAACCTCAACC 11892 Query 14072 TGTTGTCGGATCGCGGCCTGCCGATCTTCCAGTGGCTGCAGGACGAATACCGCGTCAGCG 14131 | | | || || ||| | ||||||||||||||||||||| | || ||| ||||| || Sbjct 11893 AGCTCGCTGACCGGGGCATCCCGATCTTCCAGTGGCTGCAGAAGGAGTACGGCGTCTCCG 11952 Query 14132 CCGAGGAACTCGGCAAGATGATTAAGGACGGCAAGGTCGACGCCGTCACGTTCCGCAAGG 14191 |||| | ||| |||| | | | |||||||||||| | | ||| |||||||||| Sbjct 11953 CCGACAAGCTCTCGTCGATGGTCTCGCAGGGCAAGGTCGACTCGGCCACCTTCCGCAAGG 12012 Query 14192 TCATCGCCGAGAACATCGGCGGCGCTGC 14219 |||||| ||||||||||||||||| || Sbjct 12013 TCATCGAGGAGAACATCGGCGGCGCGGC 12040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182949583641120