Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq8791 89.7 5e-13
>seq8791
Length=173249
Score = 89.7 bits (98), Expect = 5e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676
|||||||| |||||| | || |||| || ||| ||||||||||| ||||| || ||
Sbjct 143170 ACATGAGCTATCATGCATGTCAGCAAGGCATAAGATGCAATGTTGAATGGCACTCCCAAA 143229
Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735
||||| || | ||||| ||||| | ||| || || ||||||||||| || || || ||
Sbjct 143230 CCCATATCGGCAGATCGCTGATACATCTGACACGATAGCTCCCCATTGGCTACATAAAA 143288
Score = 89.7 bits (98), Expect = 5e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 34610 TTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGG 34669
|| || || || ||||||||||| || || ||| | ||||| ||||| | || |||||
Sbjct 143288 TTTTATGTAGCCAATGGGGAGCTATCGTGTCAGATGTATCAGCGATCTGCCGATATGGGT 143229
Query 34670 TTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGT 34728
|| || ||||| ||||||||||| ||| || |||| || | |||||| ||||||||
Sbjct 143228 TTGGGAGTGCCATTCAACATTGCATCTTATGCCTTGCTGACATGCATGATAGCTCATGT 143170
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447905672782080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |