Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq24164 140 2e-28 seq6347 122 6e-23 seq16715 120 2e-22 seq32996 109 4e-19 seq46021 98.7 7e-16 seq43689 98.7 7e-16 seq63460 86.0 4e-12 seq31566 82.4 5e-11 >seq24164 Length=196930 Score = 140 bits (154), Expect = 2e-28 Identities = 149/194 (77%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| ||||| ||||| || ||||| || |||||||| ||||||||||| || Sbjct 29552 AAAATGCAGATCTTCGTGAAAACTCTTACGGGGAAGACGATCACGCTCGAAGTTGAATCG 29611 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | |||||| |||| ||| | ||| | || ||| ||||| |||||| | || || || Sbjct 29612 AGCGACACTATTGACAATGTCAAAGC-TAAGATTCAAGACAAGGAAGGTATTCCACCGGA 29670 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||||| || || || ||||| || || || ||||| | ||| ||| ||| ||||| Sbjct 29671 CCAGCAGCGATTGATCTTCGCCGGAAAGCAGCTCGAAGATGGACGTACTCTAGCTGATTA 29730 Query 23787 CAACATACAAAAAG 23800 |||||| || |||| Sbjct 29731 CAACATTCAGAAAG 29744 >seq6347 Length=16439 Score = 122 bits (134), Expect = 6e-23 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || |||||| | || || || || || ||||| || ||||| | | Sbjct 13471 ATGCAGATCTTTGTGAAAACCTTGACCGGGAAGACAATTACTCTTGAGGTTGAGAGCTCT 13412 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| ||| | || |||||| | ||||| ||||| | || |||||||| Sbjct 13411 GACACTATTGACAATGTCAAGGCAAAAA-TCCAAGACAAGGAAGGAATTCCTCCAGATCA 13353 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || |||||||| ||||| |||| || | | | ||| ||| || ||||| Sbjct 13352 GCAGAGATTGATCTTTGCCGGTAAACAGTTGGAGGATGGAAGAACTCTAGCTGACTACAA 13293 Query 23790 CATACAAAAAGAGTCCACA 23808 ||||||||| ||||||||| Sbjct 13292 CATACAAAAGGAGTCCACA 13274 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || | || || || || ||||| || || ||||| | Sbjct 12787 ATGCAGATTTTTGTGAAGACATTAACCGGCAAGACAATCACCCTGGAGGTTGAAAGTTCA 12728 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || ||| || ||||||||||| | || ||||| || Sbjct 12727 GACACCATTGATAACGTGAAGGCAAAGATCCAAGACAAAGAAGGGATTCCACCAGACCAG 12668 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||||||||| ||||| ||||| || || || || | | ||| | | |||||||| Sbjct 12667 CAGCGTTTAATTTTTGCTGGCAAGCAGCTTGAGGATGGTAGGACTCTTGCTGATTACAAT 12608 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || |||||||||||| | ||||| || | | ||| |||||||| Sbjct 12607 ATCCAGAAAGAGTCCACACTCCATTTGGTGCTCCGTTTGAGAGGAGGA 12560 >seq16715 Length=90750 Score = 120 bits (132), Expect = 2e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||||||||| ||||| || ||||| ||||| || || | | Sbjct 66691 ATGCAGATCTTTGTCAAAACCCTCACTGGAAAGACAATCACCCTCGAGGTGGAAAGCTCA 66632 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| |||| | || | | ||||| ||||| | || ||||| || Sbjct 66631 GACACCATTGACAATGTTAAGGCTAAGA-TCCAGGACAAGGAAGGCATCCCCCCAGACCA 66573 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | | || ||||||||||| ||||| ||||||| || || | | |||||||| Sbjct 66572 GCAAAGGCTGATCTTTGCCGGCAAGCAACTTGAAGACGGCCGGACCCTCGCTGATTACAA 66513 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| |||||||||||||| Sbjct 66512 CATTCAAAAAGAGTCCAC 66495 Score = 107 bits (118), Expect = 1e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||||||||| ||||| || ||||| || || || || | | Sbjct 66919 ATGCAGATCTTTGTCAAAACCCTCACTGGAAAGACTATCACCCTTGAGGTGGAAAGCTCA 66860 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| || ||||| | || || ||||| ||||| |||| || || || Sbjct 66859 GACACCATTGACAACGTTAAAGC-CAAGATCCAGGACAAGGAAGGCATACCCCCGGACCA 66801 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| ||||| || || ||||||| || ||| ||| ||||||||| Sbjct 66800 GCAGAGGCTGATCTTTGCAGGCAAGCAGCTTGAAGACGGCCGTACTCTAGCCGATTACAA 66741 Query 23790 CATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 66740 TATTCAGAAGGAGTCAAC 66723 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || |||||||| |||||||||||||| || || || || | Sbjct 55226 ATGCAGATTTTCGTCAAGACCCTCACTGGAAAAACGATCACCCTTGAGGTGGAAAGTTCA 55167 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| || |||| | || || ||||| || || | || ||||| || Sbjct 55166 GACACCATTGACAACGTTAAGGC-TAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCA 55108 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || |||||||| |||||||| ||||| | || ||| | |||||||| Sbjct 55107 GCAGAGACTGATCTTTGCCGGAAAACAACTTGAAGATGGCCGTACTCTCACTGATTACAA 55048 Query 23790 CATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 55047 TATCCAGAAGGAGTCCAC 55030 Score = 100 bits (110), Expect = 2e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| |||||||| || || || || ||||| || ||||| || || ||||| | | Sbjct 66236 AATGCAAATTTTCGTGAAGACTCTGACCGGAAAGACCATCACCCTTGAGGTTGAAAGCTC 66177 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 |||||| |||| || ||||| | || | | ||||| ||||| | || ||||| | Sbjct 66176 CGACACTATTGACAACGTTAAAGCCAAGA-TCCAGGACAAGGAAGGCATTCCCCCAGACC 66118 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | || | || || |||||||| || || || || |||| ||| || | | ||||||| Sbjct 66117 AGCAAAGATTGATCTTTGCCGGAAAGCAGCTTGAGGACGGACGGACCCTTGCTGATTACA 66058 Query 23789 ACATACAAAAAGAGTCCAC 23807 |||| || || ||||| || Sbjct 66057 ACATCCAGAAGGAGTCAAC 66039 Score = 98.7 bits (108), Expect = 7e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||||||||| ||||| || ||||| || || || || | Sbjct 55454 ATGCAGATCTTCGTGAAAACCCTCACAGGAAAGACCATCACCCTTGAGGTGGAAAGTTCA 55395 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | || | | ||||| ||||| | || || ||||| Sbjct 55394 GACACCATTGACAATGTCAAAGCCAAGA-TCCAGGACAAGGAAGGGATTCCCCCTGATCA 55336 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || ||||| || ||||| | || || | | |||||||| Sbjct 55335 GCAGAGACTGATCTTTGCTGGGAAACAGCTCGAAGATGGTCGGACCCTCGCTGATTACAA 55276 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 55275 CATCCAGAAGGAGTCCAC 55258 Score = 95.1 bits (104), Expect = 8e-15 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| || || |||||| | || || || || || || || || ||||| | | Sbjct 54568 AATGCAGATCTTTGTCAAAACCTTGACTGGCAAGACTATTACACTTGAGGTTGAGAGCTC 54509 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| | || ||| |||| | || | || |||||||| ||| | || ||||||| Sbjct 54508 CGACACCATCGACAATGTTAAGGCCAAGA-TTCAGGACAAAGAGGGTATCCCACCAGATC 54450 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | || || |||||||| || || || || |||| || || | | ||||||| Sbjct 54449 AGCAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAGGACGGTCGTACCCTTGCTGATTACA 54390 Query 23789 ACATACAAAAAGAGTCCAC 23807 |||| || || ||||| || Sbjct 54389 ACATCCAGAAGGAGTCAAC 54371 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || ||| | || || || || || || || || || || | Sbjct 66007 ATGCAAATCTTTGTGAAGACCTTGACTGGCAAGACTATTACCCTTGAGGTGGAAAGTTCT 65948 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| |||| | |||| || |||||||||||| | || ||||| || Sbjct 65947 GACACCATTGACAATGTTAAGGCCAAAA-TTCAGGACAAAGAAGGTATTCCACCAGACCA 65889 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || |||||||| || || || || |||| || || | | |||||||| Sbjct 65888 GCAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAGGACGGCCGGACCCTTGCTGATTACAA 65829 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 65828 CATCCAGAAGGAGTCAAC 65811 Score = 82.4 bits (90), Expect = 5e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||| | || || ||||| |||||| | || | || | | Sbjct 54111 ATGCAGATTTTTGTGAAGACCTTGACTGGGAAAACCATCACTTTGGAGGCGGAGAGCTCT 54052 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| || |||| | || ||| ||||| || || | || |||||||| Sbjct 54051 GATACTATTGACAACGTTAAGGC-CAAGATTCAGGACAAGGAGGGAATCCCACCAGATCA 53993 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || || ||||| | | ||||| | || ||||| Sbjct 53992 GCAGAGGCTGATCTTTGCAGGGAAGCAGCTCGAAGATGGTAGGACTTTGGCTGACTACAA 53933 Query 23790 CATACAAAAAGAGTCCACATTACA 23813 ||| ||||| ||||| || || || Sbjct 53932 CATCCAAAAGGAGTCTACTTTGCA 53909 Score = 82.4 bits (90), Expect = 5e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| |||||||| || || | || ||||| || ||||| || || ||||| | | Sbjct 66464 AATGCAAATTTTCGTGAAGACTTTGACAGGAAAGACCATCACCCTTGAGGTTGAAAGCTC 66405 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| |||| ||| |||| | || | | ||||| ||||| | || ||||| | Sbjct 66404 CGACACCATTGACAATGTTAAGGCTAAGA-TCCAGGACAAGGAAGGCATTCCCCCAGACC 66346 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | || | | || ||||||||||| || || || |||| || || | | ||||||| Sbjct 66345 AGCAAAGGCTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGGACCCTTGCTGATTACA 66286 Query 23789 ACATACAAAAAGAGTCCAC 23807 |||| || || || || || Sbjct 66285 ACATCCAGAAGGAATCAAC 66267 >seq32996 Length=3898 Score = 109 bits (120), Expect = 4e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || |||||||| || || ||||| || || ||||| || || || | | Sbjct 2001 AATGCAAATCTTTGTTAAAACTCTGACCGGAAAGACTATAACTCTTGAGGTCGAGAGCTC 1942 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| |||| ||| | ||| | |||| || ||||| |||||| | || ||||| | Sbjct 1941 AGACACCATTGATAATGTCAAAGCTAAAA-TTCAAGACAAGGAAGGTATTCCCCCAGACC 1883 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | | || ||||| || ||||| || ||||| | || || | | ||||||| Sbjct 1882 AGCAGAGGCTGATCTTTGCTGGGAAACAGCTTGAAGATGGCCGAACACTTGCTGATTACA 1823 Query 23789 ACATACAAAAAGAGTCCAC 23807 |||| ||||| |||||||| Sbjct 1822 ACATCCAAAAGGAGTCCAC 1804 Score = 104 bits (114), Expect = 2e-17 Identities = 148/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 23603 TACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTG 23662 || || | |||||||| || ||||| || ||||| ||||| || |||||||| || || | Sbjct 2236 TATTTCAGATGCAGATCTTTGTTAAGACACTCACCGGAAAGACCATCACTCTTGAGGTCG 2177 Query 23663 ACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCG 23721 | | ||||| |||| ||| | ||| | || | || ||||| ||||| | || Sbjct 2176 AGAGTTCTGACACCATTGATAATGTCAAAGCTAAGA-TTCAAGACAAGGAAGGCATTCCT 2118 Query 23722 CCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGC 23781 |||||||| ||| | | || ||||| || ||||| || ||||| | || || | | Sbjct 2117 CCAGATCAGCAGAGGCTGATCTTTGCTGGGAAACAGCTTGAAGATGGCCGAACACTTGCT 2058 Query 23782 GATTACAACATACAAAAAGAGTCCAC 23807 ||||||||||| || |||||||| || Sbjct 2057 GATTACAACATCCAGAAAGAGTCTAC 2032 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || || || ||||| || ||||| || |||||||| | Sbjct 1772 ATGCAGATCTTTGTAAAGACACTTACTGGAAAGACCATCACCCTTGAAGTTGAAAGTTCA 1713 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | | || |||||| || || ||||| | || ||||| || Sbjct 1712 GATACAATTGACAACGTGAAGGCCAAAATTCAGGATAAGGAAGGGATTCCTCCAGACCAG 1653 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||||||||| ||||| || || | | | || | | |||||||| Sbjct 1652 CAGAGACTGATCTTTGCCGGCAAGCAACTTGAGGATGGAAGGACCCTGGCTGATTACAAT 1593 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || |||||||| || |||||| | ||| Sbjct 1592 ATTCAGAAAGAGTCTACCTTACATCTTGTT 1563 >seq46021 Length=44830 Score = 98.7 bits (108), Expect = 7e-16 Identities = 144/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| || || || ||||| ||||| || || || || | || || || || Sbjct 38575 AAAATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACTATTACCTTAGAGGTAGAGTCA 38634 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| |||| ||| |||| | || ||| ||||| ||||| | || ||||| Sbjct 38635 TCAGACACCATTGACAATGTTAAGGC-TAAGATTCAAGACAAGGAAGGCATTCCACCAGA 38693 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 |||||||| || || || ||||| || || || || || | ||| || ||| || || Sbjct 38694 CCAACAGCGATTGATTTTCGCCGGTAAGCAGCTCGAGGATGGACGAACACTAGCTGACTA 38753 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| || || ||||| || Sbjct 38754 CAACATCCAGAAGGAGTCTAC 38774 >seq43689 Length=21515 Score = 98.7 bits (108), Expect = 7e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| ||||| |||||||| ||||| || |||||| | || ||||| | | Sbjct 1978 ATGCAGATTTTTGTTAAGACCCTCACCGGAAAGACCATCACTTTGGAGGTTGAAAGCTCC 2037 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | || || ||||| || || | || ||||| || Sbjct 2038 GACACCATTGATAATGTCAAGGC-TAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCA 2096 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || || || || ||| |||| || | ||||| ||| || ||||| Sbjct 2097 ACAAAGGTTGATCTTCGCTGGAAAGCAATTGGAGGATGGTCGCACCCTAGCTGACTACAA 2156 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 2157 CATCCAGAAGGAGTCCAC 2174 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| ||||| ||||| || || || || || || || || ||||| | | Sbjct 2206 ATGCAGATTTTTGTTAAGACCCTTACCGGGAAGACCATAACCCTTGAGGTTGAGAGCTCC 2265 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | || || ||||| || ||| | || ||||| || Sbjct 2266 GACACCATTGACAATGTCAAGGC-CAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCA 2324 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || || || ||||| || || || | ||||| | | || ||||| Sbjct 2325 GCAGAGGTTGATCTTCGCTGGTAAACAGCTTGAGGATGGCCGCACCCTTGCGGACTACAA 2384 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| || || |||||||| | || || || | ||| || | |||||| Sbjct 2385 CATTCAGAAGGAGTCCACCCTTCACTTGGTGCTGAGGCTGAGGGGAGGA 2433 >seq63460 Length=19418 Score = 86.0 bits (94), Expect = 4e-12 Identities = 141/201 (70%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| || || || ||||| ||||| || || || || | || || || || Sbjct 5139 AAAATGCAGATCTTTGTGAAGACCCTAACGGGCAAGACTATTACCTTAGAGGTAGAGTCA 5080 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| |||| ||| | || | || ||| ||||| ||||| | || ||||| Sbjct 5079 TCAGACACCATTGACAATGTGAAGGC-TAAGATTCAGGACAAGGAAGGCATTCCACCAGA 5021 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||| | || || || || || || || || || || | || || ||| || || Sbjct 5020 CCAGCAGAGGTTGATTTTCGCAGGAAAGCAGCTCGAGGATGGCCGAACGCTAGCTGACTA 4961 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| ||||| |||||||| Sbjct 4960 CAACATCCAAAAGGAGTCCAC 4940 >seq31566 Length=6582 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763 ||||||||||| | || | ||||| |||||||| ||||| |||||||| || || Sbjct 512 GACAAAGAAGGAATTCCAGAGCACCAACAACGTTTAATTTTTGCTGGCAAACAGCTTGAG 453 Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 || | | ||| | | ||||||||||| || |||||||||| | | ||||| || | Sbjct 452 GATGGTAGGACTCTTGCTGATTACAACATCCAGAAAGAGTCCAAACTCCATTTGGTGCTC 393 Query 23824 AGGTTGCGAGGAGGA 23838 |||| |||||||| Sbjct 392 CAGTTGAGAGGAGGA 378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337747336661312