Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq63531 87.8 1e-12 >seq63531 Length=42858 Score = 87.8 bits (96), Expect = 1e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 29729 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATG 29788 || ||||||| || || || | ||| ||||||||| || || || ||||| |||| Sbjct 31926 GCGATCATGTGGGTCAGCAGCGCGTACGAGGCGATGTTGAACGGGACACCGAGGAACATG 31985 Query 29789 TCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGACAC 29848 ||| | || |||||| |||||||||||||||| |||||| | |||| ||||| | Sbjct 31986 TCCGCGCTCCGCTGGTACAGCTGGCACGAGAGCTTGCCGTCGTTGACGTGGAACTGGAAG 32045 Query 29849 ATGGCATGGCACGGAGGAAGGGCCAT 29874 | || |||||||| | || ||||| Sbjct 32046 AACGCGTGGCACGGGGCCAGCGCCAT 32071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405848055942304