Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq63531 86.0 5e-12
>seq63531
Length=42858
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 27223 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATG 27282
|| ||||||| || || || | ||| ||||||||| || || || ||||| ||||
Sbjct 31926 GCGATCATGTGGGTCAGCAGCGCGTACGAGGCGATGTTGAACGGGACACCGAGGAACATG 31985
Query 27283 TCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACTGACAT 27342
||| | || |||||| ||||| |||||||||| || ||| | |||| ||||| |
Sbjct 31986 TCCGCGCTCCGCTGGTACAGCTGGCACGAGAGCTTGCCGTCGTTGACGTGGAACTGGAAG 32045
Query 27343 ATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACG 27402
| ||||||||||| | || ||||| | || || | |||||| || | |||
Sbjct 32046 AACGCGTGGCACGGGGCCAGCGCCATCTCGGGCACCTCGGCGACGTTCCACGCCGAGACG 32105
Query 27403 ATGATGCGCCTGTCTTCTGGGTTGTTCCTGAT 27434
|||| || | | || |||||| ||| |||
Sbjct 32106 ATGAGCCGGCGGGAGTCCGGGTTGGTCCGGAT 32137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369220497515984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |