Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq63531 86.0 5e-12 >seq63531 Length=42858 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 27223 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATG 27282 || ||||||| || || || | ||| ||||||||| || || || ||||| |||| Sbjct 31926 GCGATCATGTGGGTCAGCAGCGCGTACGAGGCGATGTTGAACGGGACACCGAGGAACATG 31985 Query 27283 TCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACTGACAT 27342 ||| | || |||||| ||||| |||||||||| || ||| | |||| ||||| | Sbjct 31986 TCCGCGCTCCGCTGGTACAGCTGGCACGAGAGCTTGCCGTCGTTGACGTGGAACTGGAAG 32045 Query 27343 ATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACG 27402 | ||||||||||| | || ||||| | || || | |||||| || | ||| Sbjct 32046 AACGCGTGGCACGGGGCCAGCGCCATCTCGGGCACCTCGGCGACGTTCCACGCCGAGACG 32105 Query 27403 ATGATGCGCCTGTCTTCTGGGTTGTTCCTGAT 27434 |||| || | | || |||||| ||| ||| Sbjct 32106 ATGAGCCGGCGGGAGTCCGGGTTGGTCCGGAT 32137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369220497515984