Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq63545 120 1e-22 >seq63545 Length=90175 Score = 120 bits (132), Expect = 1e-22 Identities = 198/281 (70%), Gaps = 6/281 (2%) Strand=Plus/Plus Query 33938 CGAATCGCGAGTACTTACCCAGGAACGCGCACCG-GACAGTGCTTGGCTCGCCGTTGCGG 33996 |||| |||||| || | || ||||||| ||||| || ||| | | ||||||||| Sbjct 70876 CGAACCGCGAGAACATCCCGTGGAACGC-CACCGTGATGGTGTCCGTCGGTCCGTTGCGG 70934 Query 33997 TGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGGTGTCCGGGTGATAGACCTCG 34056 |||||||| | ||| | || ||| | || | | || ||||| | || || Sbjct 70935 TGCTTCGCCACGATGAGGTCCGCCTCACCCTGCCGCGGGTTGTCCTTCTCGTACGCCGAC 70994 Query 34057 TCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGCGCAGG 34116 || |||| || | |||| || |||||||||||||||||||| ||||| || |||||| Sbjct 70995 TCGCGGTGCAGCAGGATGACCATGTCGGCGTCCTGCTCGATCGAGCCGGATTCACGCAGG 71054 Query 34117 TCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGA--GCGGTTGAGCTGCGACA 34174 || || |||||||| ||||| | ||||||||| |||| ||||| |||||||||| Sbjct 71055 TCGGAGATCATCGGCTTCTTGTCGGCCCGCTGCTC--GGGACCACGGTTCAGCTGCGACA 71112 Query 34175 GCACGATCACGGGGATACCAAGCTCCATGGCCAGTAGCTTG 34215 | | | ||||||| || ||| | |||| |||||| Sbjct 71113 GGGCCACGACGGGGACCTGCAGTTCCTTCGCCATGAGCTTG 71153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160342687611360