Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_030927.1 Length=45858 Score E Sequences producing significant alignments: (Bits) Value seq63545 201 3e-47 >seq63545 Length=90175 Score = 201 bits (222), Expect = 3e-47 Identities = 258/353 (73%), Gaps = 2/353 (1%) Strand=Plus/Minus Query 36172 TGGCAGGCGAAACCATCATCACGGTAATCGGCAACCTGACAGCCGATCCGGAACTGCGGT 36231 |||| ||||||||| |||||||||| | |||||||| || || || ||||| ||||| | Sbjct 74095 TGGCCGGCGAAACCGTCATCACGGTGGTGGGCAACCTCACCGCGGACCCGGAGCTGCGCT 74036 Query 36232 TCACTCCGTCCGGCGCGGCGGTCGCGAACTTCACGGTCGCTTCGACTCCGCGACAGTTCG 36291 ||| | | ||| || || ||||||||||| |||| || || || || ||||| Sbjct 74035 ACACGCAGAACGGGCTCGCCGTGGCGAACTTCACCATCGCGTCCACCCCTCGCACGTTCG 73976 Query 36292 ACCGGGACGCGAACGAGTGGAAGGACGGCGATCCGCTGTTCATGCGCTGCAACC-TGTGG 36350 |||| | ||||||||||||||||||||||| |||||||| | || ||| | | ||||| Sbjct 73975 ACCGTCAGGCGAACGAGTGGAAGGACGGCGACGCGCTGTTCCTCCG-TGCGAGCGTGTGG 73917 Query 36351 CGTGACGCGGCGGAGAACGTCACGGACTCGCTGTCGAAGGGGACTCGGGTCATCGTGCAG 36410 || || || ||| |||| ||| ||| ||| ||||||| | || ||||||| |||| Sbjct 73916 CGCGAGTTCGCCGAGCACGTGGCGGGCTCACTGACGAAGGGCTCCCGCGTCATCGCGCAG 73857 Query 36411 GGCCGGCTGAAACAGCGGAGCTACGAGGACAAAGAGGGCGTCACGCGGACCATCGTCGAG 36470 || || || ||||| |||| ||||| |||||| ||| || | | ||||| Sbjct 73856 GGTCGCCTCCGTCAGCGCTCCTACCAGGACCGTGAGGGCCAGCAGCGCACGAGCATCGAG 73797 Query 36471 CTGGAAGTGGACGAGATCGGTCCGTCCCTGAAGTACGCGACGGCGAACGTGAC 36523 || || || ||||||||||| || || || |||||||| ||| | || || Sbjct 73796 CTCGAGGTCGACGAGATCGGCCCCTCGCTCCGCTACGCGACCGCGCAGGTCAC 73744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146513150789760