Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_030930.1 Length=46570 Score E Sequences producing significant alignments: (Bits) Value seq63531 93.3 1e-14 >seq63531 Length=42858 Score = 93.3 bits (102), Expect = 1e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 39055 GACACAGTTCGCGTCCGGGTCGATGCTGCAGCGCAAGCTTCGCGTCGGCTATGCGCGCGC 39114 ||| ||||||| ||| |||||||| ||||| ||||| |||||||| | ||| || Sbjct 25676 GACGCAGTTCGGGTCGACCTCGATGCTCCAGCGGAAGCTCCGCGTCGGGTTCGCGAAGGC 25617 Query 39115 CGGACGCCTGCTCGACGAGCTCGAGGCGCTCGACATCGTCGGCCCCGCACAGGGCAGCAA 39174 |||||||||| | ||| | | ||| | | ||||||||||||||| | |||| || Sbjct 25616 CGGACGCCTGATGGACCTGATGGAGTCCCGCGACATCGTCGGCCCGTCCGAGGGTTCGAA 25557 Query 39175 GGCCCGCGAGGTGCTCGTC 39193 ||| ||||| || |||||| Sbjct 25556 GGCGCGCGACGTCCTCGTC 25538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148789828296576