Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_030942.1 Length=55524 Score E Sequences producing significant alignments: (Bits) Value seq63454 84.2 8e-12 >seq63454 Length=19053 Score = 84.2 bits (92), Expect = 8e-12 Identities = 96/127 (76%), Gaps = 4/127 (3%) Strand=Plus/Minus Query 27508 CGAACTGGCGGTTCGAGCGTGTCGGCACCGACTACTTCGCC--GAAGGGCTCCCACCCTC 27565 |||||||||||||| | ||| || |||||||||||| | | ||| | || Sbjct 12308 CGAACTGGCGGTTCATGGCGAACGGGACGGACTACTTCGCCTCGTTCGAGTCCG--CGTC 12251 Query 27566 ACCACTGCAGCACTACTGGTCGCTGTCCATCGAGGAGCAGTTCTACTTCGTGTGGCCGAT 27625 || ||||||||| ||||||||| || ||||||||||||||||| |||| ||||||| Sbjct 12250 GCCGCTGCAGCACACCTGGTCGCTCTCGGTCGAGGAGCAGTTCTACGTCGTCTGGCCGAC 12191 Query 27626 TCTGCTG 27632 |||||| Sbjct 12190 GCTGCTG 12184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 177420966493248