Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq63531 87.8 3e-12 >seq63531 Length=42858 Score = 87.8 bits (96), Expect = 3e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 99569 CAGATCGACCAAATCTCCAAGGCCATGGACCAGTTGAAAAACGACCCGGATAACCGTCGT 99628 || |||||||| ||| || ||| ||| || ||| | | | ||||||| ||| || Sbjct 32170 CACATCGACCAGATCGCCCAGGTCATCGAGCAGATCCGGACCAACCCGGACTCCCGCCGG 32111 Query 99629 ATCATCGTGTCGGCATGGAACGTAGCTGACCTCGACGAAATGGCTTTAGCACCGTGCCAC 99688 ||||||| ||||| |||||||| || || | ||| ||||| | || ||||||||| Sbjct 32110 CTCATCGTCTCGGCGTGGAACGTCGCCGAGGTGCCCGAGATGGCGCTGGCCCCGTGCCAC 32051 Query 99689 GCATTCTTCCAGTTCTAC 99706 || |||||||||||| || Sbjct 32050 GCGTTCTTCCAGTTCCAC 32033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715893837948800