Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_031010.1
Length=246390
Score E
Sequences producing significant alignments: (Bits) Value
seq63531 86.0 1e-11
seq63495 86.0 1e-11
>seq63531
Length=42858
Score = 86.0 bits (94), Expect = 1e-11
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608
||||| |||||||||||||||||| | ||||||| || ||| | || | |||||| |
Sbjct 32434 GACCGCACCGGCACCGGCACGCGCAGCCTGTTCGGTGCGCAGCTCCGCTACGACCTGTCG 32375
Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668
| |||||||| || | || || || || ||| || || || ||||||||
Sbjct 32374 AAGGGCTTCCCGCTCATCACGACCAAGCGCGTGCACTTCAAGTCGGTCGCGTACGAGCTG 32315
Query 202669 CTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATC 202728
||||||||||| || ||| |||| | | | ||| | || |||| ||| |||
Sbjct 32314 CTGTGGTTCCTCCGCGGCGACGGCAACGCCCGCTGGCTGCAGGAGCACGGCGTCCGCATC 32255
Query 202729 TGGGACGAATGGGCG 202743
||| |||| ||||||
Sbjct 32254 TGGAACGAGTGGGCG 32240
>seq63495
Length=23585
Score = 86.0 bits (94), Expect = 1e-11
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 2709 CTGTAGCTCAGACGGTTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAAACCC 2768
||||||| ||| |||||| ||||||||||||||||||||||||||||||||| | |||
Sbjct 20291 CTGTAGCGCAGCTGGTTAGCGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCAAGTCCC 20350
Query 2769 GTCAG 2773
|||||
Sbjct 20351 GTCAG 20355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 787692654944000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |