Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq63531 86.0 1e-11 seq63495 86.0 1e-11 >seq63531 Length=42858 Score = 86.0 bits (94), Expect = 1e-11 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608 ||||| |||||||||||||||||| | ||||||| || ||| | || | |||||| | Sbjct 32434 GACCGCACCGGCACCGGCACGCGCAGCCTGTTCGGTGCGCAGCTCCGCTACGACCTGTCG 32375 Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668 | |||||||| || | || || || || ||| || || || |||||||| Sbjct 32374 AAGGGCTTCCCGCTCATCACGACCAAGCGCGTGCACTTCAAGTCGGTCGCGTACGAGCTG 32315 Query 202669 CTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATC 202728 ||||||||||| || ||| |||| | | | ||| | || |||| ||| ||| Sbjct 32314 CTGTGGTTCCTCCGCGGCGACGGCAACGCCCGCTGGCTGCAGGAGCACGGCGTCCGCATC 32255 Query 202729 TGGGACGAATGGGCG 202743 ||| |||| |||||| Sbjct 32254 TGGAACGAGTGGGCG 32240 >seq63495 Length=23585 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 2709 CTGTAGCTCAGACGGTTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAAACCC 2768 ||||||| ||| |||||| ||||||||||||||||||||||||||||||||| | ||| Sbjct 20291 CTGTAGCGCAGCTGGTTAGCGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCAAGTCCC 20350 Query 2769 GTCAG 2773 ||||| Sbjct 20351 GTCAG 20355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 787692654944000