Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_031107.1 Length=246291 Score E Sequences producing significant alignments: (Bits) Value seq63531 91.5 2e-13 >seq63531 Length=42858 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 202490 CTTTCTTGTCAGCTCTATCAGCGTAGTGCGGACATGTTCCTTGGCGTACCGTTTAACATC 202549 || || || ||||| || ||||| || |||||||||||||| || || ||||| |||||| Sbjct 32017 CTCTCGTGCCAGCTGTACCAGCGGAGCGCGGACATGTTCCTCGGTGTCCCGTTCAACATC 31958 Query 202550 GCGTCTTACGCCTTGCTGGTACACATGTTTGCACAACAGGCGAACATGGCGGTAGGCGAC 202609 || || ||||| ||||| |||||| | || ||| | | | ||| |||||| Sbjct 31957 GCCTCGTACGCGCTGCTGACCCACATGATCGCGGCGCAGACCGGGCTCGAGGTCGGCGAC 31898 Query 202610 TTCGTCTGGACAGGTGGTGA 202629 ||||| ||||| ||||| || Sbjct 31897 TTCGTGTGGACCGGTGGCGA 31878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 787376107053440