Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_031126.1 Length=244840 Score E Sequences producing significant alignments: (Bits) Value seq63531 96.9 5e-15 >seq63531 Length=42858 Score = 96.9 bits (106), Expect = 5e-15 Identities = 128/178 (72%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 200834 GCGAGCTTTCCTGTCAGCTGTATCAGCGTAGCGCTGATATGTTTTTAGGCGTGCCGTTCA 200893 || |||| || || |||||||| ||||| ||||| || ||||| | || || ||||||| Sbjct 32022 GCAAGCTCTCGTGCCAGCTGTACCAGCGGAGCGCGGACATGTTCCTCGGTGTCCCGTTCA 31963 Query 200894 ACATTGCATCATACGCACTACTGATTCACATGGTAGCCCAACAGGTCAATATGACTGTCG 200953 |||| || || ||||| || |||| |||||| | || ||| | | |||| Sbjct 31962 ACATCGCCTCGTACGCGCTGCTGACCCACATGATCGCGGCGCAGACCGGGCTCGAGGTCG 31903 Query 200954 GTGATTTCGTATGGACGGGTGGTGACGTACACATCTACAGCAATCACGAAGAGCAGGT 201011 | || ||||| ||||| ||||| ||| ||| ||||| ||| |||| |||||||| Sbjct 31902 GCGACTTCGTGTGGACCGGTGGCGACTGCCACGTCTACGACAACCACGTCGAGCAGGT 31845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 782736602112000