Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_031127.1 Length=240761 Score E Sequences producing significant alignments: (Bits) Value seq63531 95.1 2e-14 >seq63531 Length=42858 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 196749 CTGTCCTGTCAGCTTTACCAGCGCAGTGCAGACGTCTTCCTCGGTGTCCCGTTCAACATC 196808 || || || ||||| |||||||| || || ||| | |||||||||||||||||||||||| Sbjct 32017 CTCTCGTGCCAGCTGTACCAGCGGAGCGCGGACATGTTCCTCGGTGTCCCGTTCAACATC 31958 Query 196809 GCTTCGTACGCTCTGTTGGTTCACATGGTGGCACAGCAGGTCAATATGGTGGCGGGTGAT 196868 || |||||||| ||| || |||||| | || |||| | | | || || || Sbjct 31957 GCCTCGTACGCGCTGCTGACCCACATGATCGCGGCGCAGACCGGGCTCGAGGTCGGCGAC 31898 Query 196869 TTCGTCTGGACGGGCGGCGA 196888 ||||| ||||| || ||||| Sbjct 31897 TTCGTGTGGACCGGTGGCGA 31878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 769694189530240