Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21]
63,664 sequences; 729,602,650 total letters
Query= NC_031252.1
Length=51290
Score E
Sequences producing significant alignments: (Bits) Value
seq63545 150 6e-32
>seq63545
Length=90175
Score = 150 bits (166), Expect = 6e-32
Identities = 244/346 (71%), Gaps = 4/346 (1%)
Strand=Plus/Minus
Query 30899 TGGCCGGTGAAACAACGATCACAGTGATCGGAAACCTGACGAACGATCCAGAGCTACGGT 30958
||||||| ||||| ||||| ||| | || ||||| || || || ||||| || |
Sbjct 74095 TGGCCGGCGAAACCGTCATCACGGTGGTGGGCAACCTCACCGCGGACCCGGAGCTGCGCT 74036
Query 30959 TCACGCCGTCTGGCAGCGCTGTCGCGAACTTCACGATCGCGAGCACACCGCGAACGTTCG 31018
||||| | || ||| || ||||||||||| |||||| ||| || || |||||||
Sbjct 74035 ACACGCAGAACGGGCTCGCCGTGGCGAACTTCACCATCGCGTCCACCCCTCGCACGTTCG 73976
Query 31019 ATCGACAGTCAAACGAGTGGAAAGACGGCGAGACGCTCTTCCTGCGCGCTGCTGTCTGGC 31078
| || ||| | ||||||||||| |||||||| |||| ||||| || || || ||||
Sbjct 73975 ACCGTCAGGCGAACGAGTGGAAGGACGGCGACGCGCTGTTCCTCCGTGCGAGCGTGTGGC 73916
Query 31079 GCGAGACTGCAGAGAATGTCGCAGAGTCCCTGCAGAAGGGCATGGAGGTCATCTGCGTCG 31138
||||| || ||| | || || | || ||| ||||||| |||||| ||| |
Sbjct 73915 GCGAGTTCGCCGAGCACGTGGCGGGCTCACTGACGAAGGGCTCCCGCGTCATC-GCGCAG 73857
Query 31139 GG-CGTCTGAAGTC-GCGCAGCTACGAGACGAAAGAGGGCGAGAAGCGCACTGTCATCGA 31196
|| || || ||| |||| |||| || |||||| || ||||||| ||||||
Sbjct 73856 GGTCGCCT-CCGTCAGCGCTCCTACCAGGACCGTGAGGGCCAGCAGCGCACGAGCATCGA 73798
Query 31197 GCTCGAAGTCGACAGCATCGGCCCGTCGCTGCGATGGGCGTCTGCG 31242
|||||| |||||| |||||||| ||||| || | ||| | |||
Sbjct 73797 GCTCGAGGTCGACGAGATCGGCCCCTCGCTCCGCTACGCGACCGCG 73752
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 163882409521536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |