Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20commersonii_20[genbank_20GCA_5F001239805.1_202015-04-21] 63,664 sequences; 729,602,650 total letters Query= NC_031255.1 Length=46895 Score E Sequences producing significant alignments: (Bits) Value seq63531 89.7 2e-13 >seq63531 Length=42858 Score = 89.7 bits (98), Expect = 2e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 39628 CTGCTCGTCGACGCGGCCCGCCTGGTCATCGAGACACAGTTCGCGTCCGGGTCGATGCTG 39687 ||||| ||| |||| | | |||| || ||| ||||||| ||| |||||||| Sbjct 25708 CTGCTGCTCGCGGCGGTCGAACAGGTCGTCTCGACGCAGTTCGGGTCGACCTCGATGCTC 25649 Query 39688 CAGCGCAAGCTCCACATCGGCTACGCGCGCGCCGGCCGTCTGCTCGACGAGCTCGAGGCG 39747 ||||| ||||||| | |||| | |||| ||||| || ||| | ||| | | ||| | Sbjct 25648 CAGCGGAAGCTCCGCGTCGGGTTCGCGAAGGCCGGACGCCTGATGGACCTGATGGAGTCC 25589 Query 39748 CTCGACATCGTCGGCCCCGCGCAGGGCAGCAAGGCCCGCGAGGTCCTCG 39796 | ||||||||||||||| | |||| ||||| ||||| ||||||| Sbjct 25588 CGCGACATCGTCGGCCCGTCCGAGGGTTCGAAGGCGCGCGACGTCCTCG 25540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149829042046176