Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20habrochaites_20[genbank_20GCA_5F000577655.1_202014-02-21]
42,990 sequences; 724,284,658 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq545 172 1e-37
seq558 150 4e-31
seq728 143 6e-29
seq796 138 3e-27
seq30006 134 3e-26
seq572 134 3e-26
seq544 129 1e-24
seq3956 116 9e-21
seq3886 109 1e-18
seq4902 105 2e-17
seq31378 95.1 3e-14
seq24058 95.1 3e-14
seq9641 95.1 3e-14
seq22775 91.5 3e-13
seq1303 84.2 5e-11
>seq545
Length=31085
Score = 172 bits (190), Expect = 1e-37
Identities = 181/237 (76%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382
||||| || || || || || | ||| || |||||||| ||||| ||||||||||||||
Sbjct 2877 TATTTGCATGCCACCCCTCAGTCGAAGAACAAGATGTAAGGTAGACTCTTTCTGAATATT 2818
Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442
||||||| || || || || || || ||||| || || ||||| || || ||||| ||
Sbjct 2817 GTAGTCAGCCAGGGTCCTTCCATCCTCAAGTTGCTTGCCGGCAAAGATCAGTCTCTGCTG 2758
Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502
|| ||||| || ||||| || |||||||| || || || || || || | |||||||
Sbjct 2757 GTCTGGAGGAATCCCTTCCTTGTCCTGAATTTTGGCCTTCACGTTGTCAATGGTATCGGA 2698
Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
| ||| || || || || || ||||| ||||||||||| || ||||| ||||||||
Sbjct 2697 ACTTTCAACTTCAAGGGTGATGGTCTTTCCAGTAAGTGTCTTGACAAAGATCTGCAT 2641
Score = 158 bits (174), Expect = 3e-33
Identities = 168/219 (77%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
||||| || || ||||| | ||||| |||||||| || |||||||| | || || | |
Sbjct 3770 AGCCTCAGGACAAGATGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGCAAGGGTGCGA 3711
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| || || || || || |||||||| || |||||||||||||| || || || |||||
Sbjct 3710 CCATCCTCAAGCTGCTTACCAGCAAAGATGAGCCTCTGTTGATCTGGTGGGATCCCTTCC 3651
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520
|| ||||| ||||||||||| ||||| || | ||||| || | || ||||| | |||
Sbjct 3650 TTGTCCTGTATCTTTGCTTTCACATTGTCAATAGTATC-AGAGCTCTCCACCTCCAATGT 3592
Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| ||||| ||||| || || || ||||| ||||||||
Sbjct 3591 GATTGTCTTCCCAGTCAGAGTCTTCACAAAGATCTGCAT 3553
Score = 150 bits (166), Expect = 4e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || | ||| | || || || || | ||||| ||||| || || || || |||
Sbjct 2186 ATTCCACCACGTAGACGGAGGACAAGRTGAAGGGTAGACTCTTTTTGGATGTTGTAATCA 2127
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || |||| || ||||| || ||||| |||||||| || || ||||| ||||| |||
Sbjct 2126 GCAAGTGTTCGGCCATCTTCAAGCTGTTTCCCAGCAAAGATCAGTCTCTGCTGATCTGGA 2067
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || |||||||| ||||| ||||| || | ||| || | ||
Sbjct 2066 GGAATGCCTTCCTTGTCTTGAATCTTAGCTTTGACATTATCAATGGTGTCAGAACTCTCG 2007
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || || ||||| || || ||||| || ||||||||||||||
Sbjct 2006 ACCTCAAGAGTGATGGTCTTTCCGGTGAGTGTCTTAACAAATATCTGCAT 1957
Score = 136 bits (150), Expect = 9e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || | ||| || || || | || |||||||||||||| || || ||
Sbjct 3098 ATGCCACCTCTAAGGCGAAGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTAATCT 3039
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| | || || || || || ||||| ||||||||||| || | ||||| || || |||
Sbjct 3038 GCCAACGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGA 2979
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || || || || || || ||||||||||| ||||| || | |||||| | ||
Sbjct 2978 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTAACATTGTCGATGGTATCTGAACTCTCA 2919
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| | ||||| ||||| || || | ||| || |||||||| |||||
Sbjct 2918 ACCTCCAAAGTAATTGTCTTCCCTGTCAATGTCTTGACAAATATTTGCAT 2869
Score = 131 bits (144), Expect = 4e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|| ||||| | || || || ||||| || || ||||| | ||||| || || || ||
Sbjct 3305 ACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGCAAGAGTCCTCCCRTCCTCA 3246
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
|||||||| |||||||| || | | |||||| || || || || || || || || |||
Sbjct 3245 AGTTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGA 3186
Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530
||||||||||| ||||| || | |||||| | || ||||| | |||||| |||||
Sbjct 3185 ATCTTTGCTTTCACATTGTCAATGGTATCTGAACTCTCAACCTCCAATGTAATTGTCTTC 3126
Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| | || || ||||| || |||||
Sbjct 3125 CCAGTCAAAGTCTTGACAAAAATTTGCAT 3097
Score = 129 bits (142), Expect = 1e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|| ||||| | || || || ||||| || || ||||| | ||||| || || || ||
Sbjct 3533 ACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGCAAGAGTCCTCCCRTCCTCA 3474
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
|| ||||| |||||||| || | | |||||| || || || || || || || || |||
Sbjct 3473 AGWTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGA 3414
Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530
||||||||||| ||||| || | |||||| | || ||||| | ||| || |||||
Sbjct 3413 ATCTTTGCTTTCACATTGTCAATGGTATCTGAACTCTCAACCTCCAATGTGATTGTCTTC 3354
Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| | || || ||||| ||||||||
Sbjct 3353 CCAGTCAAAGTCTTCACAAAGATCTGCAT 3325
>seq558
Length=67963
Score = 150 bits (166), Expect = 4e-31
Identities = 163/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | || ||||| ||||| || || ||||||| ||| |||| || ||
Sbjct 63846 AAGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCTAGCGTTCGGCCATC 63787
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || || ||||| |||||||| | |||||| || || || || || ||||| || ||
Sbjct 63786 CTCAAGCTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTC 63727
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
||||||||| || || ||||| || | ||| || | |||||||||| ||||||||
Sbjct 63726 CTGAATCTTAGCCTTAACATTGTCAATGGTGTCTGATGACTCTACCTCTAAGGTAATAGT 63667
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
||| || || || || || ||||| |||||||||||
Sbjct 63666 CTTGCCCGTTAGGGTCTTCACAAAGATCTGCATTTT 63631
Score = 122 bits (134), Expect = 2e-22
Identities = 147/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||||| ||| |||| || || || || || || ||
Sbjct 17122 GTGGACTCCTTCTGGATGTTGTAGTCAGCTAGCGTTCGGCCATCCTCGAGCTGCTTACCG 17181
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| ||||| | | ||| || || || || || ||||| || || |||||||| || ||
Sbjct 17182 GCGAAAATCAATCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCTTGAATCTTAGCCTTA 17241
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| || | |||||||||| ||||||||||| || || || ||
Sbjct 17242 ACATTGTCAATGGTGTCTGATGACTCTACCTCTAAGGTAATAGTCTTGCCCGTCAGGGTC 17301
Query 104543 TTTACAAATATCTGCATTTT 104562
|| ||||| |||||||||||
Sbjct 17302 TTCACAAAGATCTGCATTTT 17321
>seq728
Length=46982
Score = 143 bits (158), Expect = 6e-29
Identities = 582/901 (65%), Gaps = 27/901 (3%)
Strand=Plus/Minus
Query 268690 TAACCCAGATAGATT-TGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACA 268748
|||||||||| |||| ||| || || ||||| ||| || | || ||| |||||||
Sbjct 2842 TAACCCAGATCGATTCTGT-ATGTTCCCAATTCAGTATCCACAGATTTGGGAAATGTACA 2784
Query 268749 AACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAG 268808
| | ||| | || ||||| ||||| ||||||||||| ||||| || || || | |
Sbjct 2783 AGAAAGCCATGGCATCTTTCTGGACGGTAGAAGAAGTCGATCTCTCCACCGA--TACTCG 2726
Query 268809 --ATTGGAAAAATTTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTT 268866
| ||| |||| ||| | | | ||||| || || || || ||||||| |||||
Sbjct 2725 TCACTGGGAAAACCTAACATCCGGTGAAAGGCATTTCATCACTCATGTTCTTGCCTTTTT 2666
Query 268867 TGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACA 268926
||| | || || |||||| || || || | | | |||| |||| || ||
Sbjct 2665 TGCTGCCTCAGACGGCATCGTTTTAGAGAACCTCGCTGGAAGGTTCATGAAAGACGTCCA 2606
Query 268927 GATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGA 268986
| || | || | | ||| || || ||||| || || || || ||||| ||||| ||
Sbjct 2605 GGTTGCCGAGGTTCGTGCTTTCTATGGGTTCCAAATCGCCATTGAGAATATCCATTCCGA 2546
Query 268987 GATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATT 269046
|||||||||| | | | || | || || | ||| ||||||||| | | | ||
Sbjct 2545 GATGTACAGTTTGCTGTTGGAGTCGTACATCAAGGATTCTGACGAAAAGAGCAAATTGTT 2486
Query 269047 TTCTTCTA-TGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGA 269105
| | | |||| || || ||||| ||| || | ||||||| || ||||
Sbjct 2485 CCGTGCGATTGAG-ACAATCCCTTGTGTTGAAAAGAAGGCGAAATGGGCCCTTCGTTGGA 2427
Query 269106 TAAACGATAG---CGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTA 269162
| |||| | || | | || || | || || ||||||||| ||| ||||| |
Sbjct 2426 T---CGATGGGTCCGAAACCTTCGCGGAGCGTTTGGTGGCTTTTGCCTGTGTTGAAGGGA 2370
Query 269163 TATTCTT-TTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCA 269221
| ||||| ||| ||| || | || ||||||||||| ||| | || | |||||
Sbjct 2369 TTTTCTTCAGCGGAAGCTTCTG-TTCGATATTTTGGTTGAAAAAACGGGGGTTAATGCCT 2311
Query 269222 GGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCT 269281
|||||||| ||||| || || || || || ||||||||||| ||||| || || ||
Sbjct 2310 GGATTAACCTTCTCAAATGAGTTAATTTCAAGAGACGAAGGTTTGCACTGTGATTTTGCG 2251
Query 269282 TGTTTATTATTTACTAATTATCTTTCACACAAACCT-TCTCAAGATAGAGTATACGAAAT 269340
|||| | ||||| | | | | || || || || | || |||| | |||
Sbjct 2250 TGTT--TGCTTTAC--AGTTTGCTAAGGACGAAGCTAACTGAGGAGCGAGTCAGGGGAAT 2195
Query 269341 TAT---AGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCTATCGA 269397
| | |||| ||||| |||||| || || | || ||||| || |
Sbjct 2194 TGTTGCAGAT---GCTGTGGAGATAGAAAGGGAGTTCGTGTGTGATGCTCTTCCTTGTGC 2138
Query 269398 TCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATT 269457
||| | || |||||| | | | ||||| |||| || |||| ||| |||| |||||
Sbjct 2137 TCTGGTGGGAATGAATGGAGATTTGATGAGTAAATACATAGAGTTTGTAGCTGACAGATT 2078
Query 269458 GCTGGTGTCTTTAGGGTTTAGTAAAAAATATAACGTTGAAAATCCGTTTAGTTTTATGGA 269517
| ||| |||| || | | || | || || | | | ||||| ||| || |||||
Sbjct 2077 GTTGGATGCTTTGGGTTATGACAAGATGTACAATGCTCAGAATCCATTTGATTGGATGGA 2018
Query 269518 GAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTATCAGAA 269577
| || ||| |||| ||| |||||||||| |||||| | || | | ||||||||
Sbjct 2017 GCTGATTAGTTTACAAGGGAAGACTAATTTCTTTGAGAAGAGAGTTGGGGAGTATCAGAA 1958
Query 269578 A 269578
|
Sbjct 1957 A 1957
>seq796
Length=44438
Score = 138 bits (152), Expect = 3e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || ||||| | || ||||| | || ||||| ||||||||||| || ||
Sbjct 19974 ATACCTCCCCTGAGCCTCAACACAAGATGAAGGGTTGATTCCTTCTGAATATTGTAATCG 19915
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || || || ||||| | || || ||||||||||| | ||| || || || ||
Sbjct 19914 GCTAATGTCCTTCCATCTTCCAACTGCTTGCCAGCAAAAATCAACCTTTGCTGGTCTGGT 19855
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || || ||||| ||||||||||| || ||||| || || | ||| ||| |||
Sbjct 19854 GGGATACCCTCTTTGTCCTGAATCTTGGCCTTTACGTTGTCAATGGTGTCGGAGCTTTCC 19795
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
||||| || ||||||||||| ||||| | || || || || || ||||||
Sbjct 19794 ACCTCAAGGGTAATAGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCATT 19744
Score = 123 bits (136), Expect = 6e-23
Identities = 148/200 (74%), Gaps = 6/200 (3%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || ||||| ||||| || || || | || || | || ||||| || || || ||
Sbjct 18801 GTGGACTCTTTTTGAATGTTGTAATCGGCGAGGGTACGGCCATCTTCAAGCTGCTTGCCC 18742
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || |||||||| || || || || || ||||| || ||||| ||||| |||||
Sbjct 18741 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTA 18682
Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539
|| || || | ||| || ||| ||| ||||| || || || ||||| ||||| ||
Sbjct 18681 ACGTTGTCAATGGTGTCTGAGCT---TTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGG 18625
Query 104540 GTTTTTACAAATATCTGCAT 104559
||||| ||||||||||||||
Sbjct 18624 GTTTTGACAAATATCTGCAT 18605
Score = 116 bits (128), Expect = 9e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || || || || ||||| || || || || || ||||| | ||||| || || |||
Sbjct 20184 AGGACAAGGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCCGCCAGAGTCCTTCCATCT 20125
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || || || || ||||| || || ||||| || || || || ||||| || || |||
Sbjct 20124 TCAAGCTGCTTCCCTGCAAAGATCAGTCTCTGCTGGTCCGGTGGGATTCCCTCCTTGTCC 20065
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|||||||| || || ||||| || | |||||| | || ||||| | || || ||
Sbjct 20064 TGAATCTTAGCCTTCACATTGTCAATGGTATCAGAACTCTCCACCTCCAAAGTTATGGTT 20005
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| ||||| | || || ||||| ||||||||
Sbjct 20004 TTCCCAGTCAAGGTCTTCACAAAAATCTGCAT 19973
>seq30006
Length=21699
Score = 134 bits (148), Expect = 3e-26
Identities = 146/194 (75%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429
|||||||||| || || |||| |||||| | || ||||| || || ||||| || || |
Sbjct 12893 CTTTCTGAATGTTGTAATCAGCTAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCGAAGA 12834
Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489
| | | ||| || || || || || ||||| || || |||||||| ||||| ||||| |
Sbjct 12833 TCAATCGCTGCTGGTCCGGTGGAATACCTTCCTTGTCTTGAATCTTAGCTTTGACATTGT 12774
Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549
| | || ||||| | ||| || || || || || ||||| || ||||| ||||| || |
Sbjct 12773 CAATAGTGTCGCTTGATTCAACTTCAAGCGTGATCGTCTTCCCCGTAAGAGTTTTCACGA 12714
Query 104550 ATATCTGCATTTTG 104563
| ||||||||||||
Sbjct 12713 AGATCTGCATTTTG 12700
>seq572
Length=122185
Score = 134 bits (148), Expect = 3e-26
Identities = 113/139 (81%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390
|||| || || ||||| || || || || | || |||||||||||||| || || ||||
Sbjct 87944 TTCCTCCCCTGAGCCTCAGAACAAGGTGAAGAGTTGATTCTTTCTGAATGTTGTAATCAG 88003
Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450
|| ||||| || ||||| | ||||||||||||||||| || ||||| ||||||||||
Sbjct 88004 CGAGGGTTCTCCCATCTTCCAACTGTTTTCCAGCAAAAATCAGTCTCTGCTGATCAGGAG 88063
Query 104451 GTATTCCTTCTTTATCCTG 104469
|||| ||||||||||||||
Sbjct 88064 GTATGCCTTCTTTATCCTG 88082
>seq544
Length=28317
Score = 129 bits (142), Expect = 1e-24
Identities = 157/213 (74%), Gaps = 1/213 (0%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || |||||||| || || ||||||| |||||| ||||||| || || || || ||
Sbjct 21862 AAGAACAAGATGTAAAGTGGACTCTTTCTAAATATTGTAGTCAGCCAGGGTCCTTCCATC 21921
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| ||||| || || | ||| || || |||| || || |||| || ||||| |||||
Sbjct 21922 CTCAAGTTGCTTGCCGG-AAAGATCAGTCTCTTCTGGTCTAGAGGAATCCCTTCCTTATC 21980
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|||||| || || || || || || | |||| | ||| || || || || || ||
Sbjct 21981 CTGAATTTTGGCCTTCACGTTGTCAATTATATCTGAACTTTCAACTTCAAGGGTGATGGT 22040
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| ||||||||| | || ||||| ||||||||
Sbjct 22041 CTTTCCAGTAAGTATCTTGACAAAGATCTGCAT 22073
Score = 111 bits (122), Expect = 4e-19
Identities = 164/231 (71%), Gaps = 1/231 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || | ||| || || || | || || | ||||||||| || || ||
Sbjct 21616 ATGCCGCCTCTAAGACGAAGAACAAGGTGCAGGGTTGACTGTTTCTGAATGTTGTAATCT 21675
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| | || || || ||||| ||||| | ||||||||| || | ||||| || | |||
Sbjct 21676 GCCAAGGTCCTTCCATCTTCAAGTTGCTCTCCAGCAAATATCAATCTCTGCTGGTTTGGA 21735
Query 104450 GGTATTCCTTC-TTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTC 104508
|| || || || ||| || || ||||||||||| ||||| | | ||||| | ||
Sbjct 21736 GGAATACCCTCCTTTGTCTTGGATCTTTGCTTTAACATTGTTGATAGTATCTGAACTCTC 21795
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| | ||||| ||||| || || | ||| || |||||||| |||||
Sbjct 21796 AACCTCCAAAGTAATTGTCTTCCCTGTCAATGTCTTAACAAATATTTGCAT 21846
Score = 109 bits (120), Expect = 1e-18
Identities = 167/233 (72%), Gaps = 5/233 (2%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || | ||| | || || ||||| | ||||| || | || || || || |||
Sbjct 22216 ATTCCACCACGTAGACGGAGGACAAGATGGAG-GTAGACTCGTCTTGGATGTTGTAATCA 22274
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| | ||| || ||||| || ||||| |||||||| || | |||| | ||||| |||
Sbjct 22275 GCAATTGTTTGGCCATCTTCAAGCTGTTTCCCAGCAAAGATCAACCTCCGCTGATCTGGA 22334
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| || ||||| || || |||||||| ||||||||||| || | || || || | ||
Sbjct 22335 GGAATGCCTTCCTTGTCTTGAATCTTAGCTTTTACATTATCAATAGTGTC-AGAGCTCTC 22393
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTT--TACAAATATCTGCAT 104559
||||| || || || ||||| || | || || || ||||||||||||||
Sbjct 22394 GACCTCAAGAGTGATGGTCTTTCCGATGAGCGTCTTAAAACAAATATCTGCAT 22446
>seq3956
Length=148667
Score = 116 bits (128), Expect = 9e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|| ||||| | |||||| || || |||||||| || |||| || || | | || |
Sbjct 117774 ACAAGATGAATTGTAGACTCCTTTTGAATATTGTAATCAGCAAGTGTATGATCATCCTTA 117833
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
| |||||||||| || | | || || |||||||| | || ||||||||||| || | |
Sbjct 117834 AATTGTTTTCCACCATATACTAATCTTTGTTGATCTGAGGGAATTCCTTCTTTGTCTTCA 117893
Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530
||||||||||| ||||| || | || | | || | || || || ||||| |||||
Sbjct 117894 ATCTTTGCTTTAACATTGTCAATGGAGTTGGTACTCTTCACATCCAGAGTAATGGTCTTT 117953
Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| | || ||||| ||||| || |||||
Sbjct 117954 CCAATGAGAGTTTTAACAAAGATTTGCAT 117982
>seq3886
Length=20373
Score = 109 bits (120), Expect = 1e-18
Identities = 143/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| || ||||| ||||| ||||||| || || | || || || || || || |||
Sbjct 12801 GTAGACTCCTTCTGGATATTGTAGTCAGCAAGGGTGCGGCCATCCTCAAGCTGCTTACCA 12860
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || | |||||| || || || || || || || || ||||||||||| |||||
Sbjct 12861 GCGAAGATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTGAATCTTAGCTTTC 12920
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| || | || ||||| | || || ||||| || || | ||
Sbjct 12921 ACATTGTCGATGGTGTCAGAACTCTCCACCTCCAAAGTGATGGTCTTCCCGGTCAAGGTC 12980
Query 104543 TTTACAAATATCTGCATT 104560
|| ||||| |||||||||
Sbjct 12981 TTCACAAAGATCTGCATT 12998
Score = 107 bits (118), Expect = 4e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || || |||||||| || | || | || || || || || || || |||||
Sbjct 12996 ATTCCTCCCCTCAGCCTAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCC 13055
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| | ||| | || || || || || || ||||||||||| | |||||| || || ||
Sbjct 13056 GCCAAAGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGG 13115
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| || || || || || || ||||| || || ||||| || | ||| ||| || | ||
Sbjct 13116 GGAATACCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCG-GAGCTCTC 13174
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || || || || || ||||| || || ||||| || |||||
Sbjct 13175 AACCTCCAGGGTGATGGTTTTCCCGGTAAGGGTCTTAACAAAGATTTGCAT 13225
>seq4902
Length=4857
Score = 105 bits (116), Expect = 2e-17
Identities = 149/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| |||||||||| || |||| |||||| || | ||||| | | || || ||
Sbjct 819 AGCACTAGATGTAGAGTTGATTTTTTCTGGATGCTGTAGTCCGCCAAGGTGAGGCCATCC 878
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || || || ||||||||||| ||||| || || || ||||| || ||||||| ||
Sbjct 879 TCGAGCTGCTTACCAGCAAAAATCAGCCTTTGCTGGTCTGGAGGGTTTTCTTCTTTGTCT 938
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|| ||||| || || |||| || | |||| ||| ||| || || || ||||| ||
Sbjct 939 TGTATCTTGGCCTTAGCATTGTCGATAGTATTGCTGAATTCGACATCCAGAGTAATGGTT 998
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCT 104555
|||| || || ||||| || |||||||
Sbjct 999 TTACTGGT-AGAGTTTTCACGAATATCT 1025
>seq31378
Length=18529
Score = 95.1 bits (104), Expect = 3e-14
Identities = 150/212 (71%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 104356 ATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTA---- 104411
||| || || | |||||||| || |||||||||| ||||| | | | | |||||
Sbjct 7620 ATGCAAAGTCAACTCTTTCTGGATGTTATAGTCAGCAAGAGTGCGATCATTTTCTACCTA 7679
Query 104412 GTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAA 104471
| | || ||||||||||| | | ||||| | ||||| |||||||| || || ||||
Sbjct 7680 GCTTCTTACCAGCAAAAATCAAAATTTGTTGGTGGGGAGGAATTCCTTCCTTGTCTTGAA 7739
Query 104472 TCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTAC 104531
|||| | || ||||| | | ||| | || | ||| |||| ||| || || || ||||
Sbjct 7740 TCTTGACCTTGACATTGTAAATAGTAGCACTGGATTCAACCTGTAGGGTTAT-GTTTTAC 7798
Query 104532 CAGTAAGTGTTTTT-ACAAATATCTGCATTTT 104562
| | | |||||| || | |||||||||||
Sbjct 7799 CCATCAAAGTTTTTCACGGAGATCTGCATTTT 7830
>seq24058
Length=15986
Score = 95.1 bits (104), Expect = 3e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515
||||| |||||||||||||| || || ||||| || | |||||||| | ||| |||||
Sbjct 6231 CCTTCCTTATCCTGAATCTTAGCCTTGACATTGTCGATTGTATCGCTGGATTCAACCTCA 6290
Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
|| || |||||||| || || || ||||| || || |||||||| ||
Sbjct 6291 AGGGTTATAGTCTTCCCTGTTAGGGTTTTCACGAAGATCTGCATCTT 6337
>seq9641
Length=27822
Score = 95.1 bits (104), Expect = 3e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515
||||| || ||||| ||||| ||||| ||||| || | ||||||||| | ||| || ||
Sbjct 27343 CCTTCCTTGTCCTGTATCTTAGCTTTAACATTATCGATGGTATCGCTGGATTCAACTTCC 27402
Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
|| || || || ||||| || || ||||| || ||||||||||||||
Sbjct 27403 AGCGTTATCGTTTTACCGGTCAGAGTTTTCACGAATATCTGCATTTT 27449
>seq22775
Length=43394
Score = 91.5 bits (100), Expect = 3e-13
Identities = 86/110 (78%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
|| ||||| || ||||||||||| ||||| ||||| || | |||||||| | ||| |||
Sbjct 14152 ATACCTTCCTTGTCCTGAATCTTCGCTTTGACATTGTCGATCGTATCGCTGGATTCAACC 14211
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
|| || || || ||||| || || || ||||| || || |||||||| ||
Sbjct 14212 TCAAGGGTTATGGTCTTCCCTGTTAGGGTTTTCACGAAGATCTGCATCTT 14261
>seq1303
Length=75412
Score = 84.2 bits (92), Expect = 5e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429
||||||| || |||||||||| ||||| | || |||||||| || || ||||||||||
Sbjct 69975 CTTTCTGGATGTTATAGTCAGCAAGAGTGCGGCCATCTTCTAGCTGCTTACCAGCAAAAA 69916
Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCT 104458
| ||||| || || || ||||| ||||||
Sbjct 69915 TCAGCCTTTGCTGGTCTGGAGGAATTCCT 69887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1150764198966920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |