Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20habrochaites_20[genbank_20GCA_5F000577655.1_202014-02-21]
42,990 sequences; 724,284,658 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq796 134 1e-26
seq3886 129 5e-25
seq545 122 8e-23
seq30006 118 9e-22
seq544 109 5e-19
seq16835 89.7 5e-13
seq558 87.8 2e-12
>seq796
Length=44438
Score = 134 bits (148), Expect = 1e-26
Identities = 173/236 (73%), Gaps = 2/236 (1%)
Strand=Plus/Minus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||| || ||| |||| | |||| |||||||| | || || ||||| || | ||| |
Sbjct 19751 TTTGCATTCCACCTCGGAGACGCAGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGT 19692
Query 94833 AATCG-CTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGA 94891
||||| || || || | ||| |||| ||| |||||| ||||||| || || |||||
Sbjct 19691 AATCGGCTAAT-GTCCTTCCATCTTCCAACTGCTTTCCGGCAAAGATCAACCTCTGCTGG 19633
Query 94892 TCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCG 94951
||||| ||||||||||||||||| | |||||| ||||| || | | | |||||||
Sbjct 19632 TCTGGTGGAATACCTTCTTTGTCCTGAATTTTGGCCTTAACATTGTCAATGGTGTCAGAA 19573
Query 94952 TGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || |||| ||||| || || ||||| | || ||||||||||| |||||
Sbjct 19572 CTTTCCACCTCAAGGGTGATTGTCTTGCCAGTCAAGGTCTTCACAAAGATTTGCAT 19517
Score = 98.7 bits (108), Expect = 9e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863
|||||||||||| |||||||| | ||| || || || ||| | ||| || |||||
Sbjct 20176 GTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCCGCCAGAGTCCTTCCATCTTCAAGCTG 20117
Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923
|| || ||||||| | ||| ||||| || || || || || || ||||| | ||| ||
Sbjct 20116 CTTCCCTGCAAAGATCAGTCTCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGAATCTT 20057
Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983
||||| || | | | || |||| || || || | || |||||||| |||||
Sbjct 20056 AGCCTTCACATTGTCAATGGTATCAGAACTCTCCACCTCCAAAGTTATGGTTTTCCCAGT 19997
Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007
| || |||||||| ||||||||
Sbjct 19996 CAAGGTCTTCACAAAAATCTGCAT 19973
>seq3886
Length=20373
Score = 129 bits (142), Expect = 5e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836
|| |||||| |||| | | ||||||||||| || || |||||||| | ||| || ||
Sbjct 12995 CATTCCTCCCCTCAGCCTAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTC 13054
Query 94837 GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGG 94896
|| |||| | |||||| ||||| || || |||| || || || ||||| |||||
Sbjct 13055 CGCCAAAGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGG 13114
Query 94897 AGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTC 94956
|||||||| || ||||| | || || |||||||| | | | ||||| | | ||
Sbjct 13115 GGGAATACCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTCTC 13174
Query 94957 GACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || | ||||||||||| || ||||| || || |||||||| |||||
Sbjct 13175 AACCTCCAGGGTGATGGTTTTCCCGGTAAGGGTCTTAACAAAGATTTGCAT 13225
Score = 120 bits (132), Expect = 3e-22
Identities = 157/213 (74%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCTCATAGT--GTTGGAATC 94854
|||||| || | || || ||||| || | ||||||||| ||| | ||| || | ||
Sbjct 13928 CACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAATCAGCT-AGAGTCCGTCCG--TC 13984
Query 94855 CTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTC 94914
||||| ||| |||||| | ||||| | ||||||||||| || ||||| ||||| |||||
Sbjct 13985 CTCCAACTGCTTTCCGGCGAAGATAAGCCTTTGCTGATCAGGGGGAATCCCTTCCTTGTC 14044
Query 94915 ATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGT 94974
| || || ||||| ||| | ||| || |||| || || || | ||||| ||
Sbjct 14045 CTGGATCTTAGCCTTAACGTTGTCGATTGTATCAGAACTTTCCACCTCTAGGGTGATAGT 14104
Query 94975 TTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| || ||||||||||| |||||||||||
Sbjct 14105 CTTTCCGGTGAGAGTTTTCACGAAGATCTGCAT 14137
Score = 113 bits (124), Expect = 4e-20
Identities = 153/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCTCATAGTGTTGGAATCCT 94856
|||||| || | || || ||||| || | ||| || || ||| | ||| | ||| |
Sbjct 13700 CACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCT-AGGGTGCGGCCATCTT 13758
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
||| ||| ||||| ||||||| || || ||||| ||||| ||||| ||||| || || |
Sbjct 13759 CCAACTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTATCCT 13818
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976
|| || ||||||||| | | | ||||| | | ||||| |||| || || || |
Sbjct 13819 GGATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTTTCGACCTCAAGGGTAATCGTCT 13878
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || |||||||| ||||| |||||||||||
Sbjct 13879 TACCCGTAAGAGTCTTCACGAAGATCTGCAT 13909
Score = 98.7 bits (108), Expect = 9e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 94811 GTAGATTCCTTTTGCACGTTATAATC-GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCC 94869
||||| ||||| || | ||| || || ||| | ||| | |||||| ||||| || ||
Sbjct 13485 GTAGACTCCTTCTGGATGTTGTAGTCAGCTAAG-GTGCGGCCATCCTCGAGCTGCTTCCC 13543
Query 94870 GCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTT 94929
| ||||| || || ||||| ||||| || || ||||| || || | || || |||||
Sbjct 13544 AGCGAAGATCAACCTCTGCTGGTCTGGGGGGATCCCTTCCTTATCCTGGATCTTAGCCTT 13603
Query 94930 GACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGT 94989
||| | | | ||||| | | || || || | |||||||| ||||| ||||||||
Sbjct 13604 CACGTTGTCAATGGTGTCGGAGCTTTCCACCTCCAAAGTGATGGTCTTTCCGGTAAGAGT 13663
Query 94990 TTTCACAAAGATCTGCAT 95007
|| || |||||||||||
Sbjct 13664 CTTAACGAAGATCTGCAT 13681
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863
||||| ||||| ||||| || | || || || | ||| | |||||| |||||
Sbjct 12794 GTGCAGGGTAGACTCCTTCTGGATATTGTAGTCAGCAAGGGTGCGGCCATCCTCAAGCTG 12853
Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923
|| || | ||||| || || ||||| ||||| || || || || ||||| | ||| ||
Sbjct 12854 CTTACCAGCGAAGATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTGAATCTT 12913
Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983
|| || || | ||| ||||||| || || || | |||||||| || || ||
Sbjct 12914 AGCTTTCACATTGTCGATGGTGTCAGAACTCTCCACCTCCAAAGTGATGGTCTTCCCGGT 12973
Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007
| || |||||||||||||||||
Sbjct 12974 CAAGGTCTTCACAAAGATCTGCAT 12997
>seq545
Length=31085
Score = 122 bits (134), Expect = 8e-23
Identities = 174/241 (72%), Gaps = 3/241 (1%)
Strand=Plus/Minus
Query 94769 AAAT-TTTACACTCCTCCTCTCAATCGCAACACCAAG-TGCAAAGTAGATTCCTTTTGCA 94826
|||| ||| || || || |||| ||| || | |||| || || ||||| || || || |
Sbjct 2880 AAATATTTGCATGCCACCCCTCAGTCG-AAGAACAAGATGTAAGGTAGACTCTTTCTGAA 2822
Query 94827 CGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886
|| || || || || | |||||| || || || ||| ||||||| | ||| |
Sbjct 2821 TATTGTAGTCAGCCAGGGTCCTTCCATCCTCAAGTTGCTTGCCGGCAAAGATCAGTCTCT 2762
Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946
|||| ||||||||||| ||||| ||||| | |||||| ||||| ||| | | | || |
Sbjct 2761 GCTGGTCTGGAGGAATCCCTTCCTTGTCCTGAATTTTGGCCTTCACGTTGTCAATGGTAT 2702
Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006
| | || || |||| |||||||| ||||||||||| || || |||||||||||||
Sbjct 2701 CGGAACTTTCAACTTCAAGGGTGATGGTCTTTCCAGTAAGTGTCTTGACAAAGATCTGCA 2642
Query 95007 T 95007
|
Sbjct 2641 T 2641
Score = 120 bits (132), Expect = 3e-22
Identities = 148/199 (74%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTC 94868
||||| || ||||| | ||| ||||| || |||||| | ||| || |||||||| |
Sbjct 2153 GTAGACTCTTTTTGGATGTTGTAATCAG-CA-AGTGTTCGGCCATCTTCAAGCTGTTTCC 2096
Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928
| ||||||| | ||| ||||||||||||||||| ||||| ||||| | ||| || || |
Sbjct 2095 CAGCAAAGATCAGTCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTAGCTT 2036
Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988
|||| | | ||||||| ||||| |||| |||||||| ||||| || || |
Sbjct 2035 TGACATTATCAATGGTGTCAGAACTCTCGACCTCAAGAGTGATGGTCTTTCCGGTGAGTG 1976
Query 94989 TTTTCACAAAGATCTGCAT 95007
| || ||||| ||||||||
Sbjct 1975 TCTTAACAAATATCTGCAT 1957
Score = 114 bits (126), Expect = 1e-20
Identities = 147/199 (74%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTC 94868
||||| || ||||| | ||| ||||| || |||||| | ||| || |||||||| |
Sbjct 2381 GTAGACTCTTTTTGGATGTTGTAATCAG-CA-AGTGTTCGGCCATCTTCAAGCTGTTTCC 2324
Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928
| ||||||| | || ||||| ||||| ||||||||||| ||||| | |||||| || |
Sbjct 2323 CAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCTTGAATTTTAGCTT 2264
Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988
|||| ||| ||||| | | ||||| |||| || || || || || || ||||
Sbjct 2263 TGACATTATCGATGGTGTCTGAGCTCTCGACCTCAAGAGTTATAGTCTTCCCGGTCAGAG 2204
Query 94989 TTTTCACAAAGATCTGCAT 95007
|||| |||||||| |||||
Sbjct 2203 TTTTAACAAAGATTTGCAT 2185
Score = 114 bits (126), Expect = 1e-20
Identities = 147/199 (74%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTC 94868
|| || |||||||| | ||| ||||| || |||||| | ||| || |||||||| |
Sbjct 2609 GTGGACTCCTTTTGGATGTTGTAATCAG-CA-AGTGTTCGGCCATCTTCAAGCTGTTTCC 2552
Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928
| ||||||| | || ||||| ||||| ||||||||||| ||||| | |||||| || |
Sbjct 2551 CAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCTTGAATTTTAGCTT 2492
Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988
|||| ||| ||||| | | ||||| |||| || || || || || || ||||
Sbjct 2491 TGACATTATCGATGGTGTCTGAGCTCTCGACCTCAAGAGTTATAGTCTTCCCGGTCAGAG 2432
Query 94989 TTTTCACAAAGATCTGCAT 95007
|||| |||||||| |||||
Sbjct 2431 TTTTAACAAAGATTTGCAT 2413
Score = 109 bits (120), Expect = 5e-19
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
||||||||||| |||||||||| || | ||| || ||||| || | ||| || ||
Sbjct 3551 CCTCCTCTCAAACGCAACACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGCA 3492
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||||| || ||||| || ||||||| || | || || ||||| |||
Sbjct 3491 AGAGTCCTCCCRTCCTCAAGWTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGGGGGA 3432
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
||||| || ||||| | ||| ||||| || || | | | || || | || ||
Sbjct 3431 ATACCCTCCTTGTCTTGAATCTTTGCTTTCACATTGTCAATGGTATCTGAACTCTCAACC 3372
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | ||||| || || ||||| | ||| |||||||||||||||||
Sbjct 3371 TCCAATGTGATTGTCTTCCCAGTCAAAGTCTTCACAAAGATCTGCAT 3325
Score = 100 bits (110), Expect = 3e-16
Identities = 151/210 (72%), Gaps = 5/210 (2%)
Strand=Plus/Minus
Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTC 94857
|||| || | |||||| || || || | |||||| || || || || || ||||||
Sbjct 3760 CAAGATGAAGAGTAGACTCTTTCTGGATGTTATAGTCTG-CA-AGGGTGCGACCATCCTC 3703
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||| || || ||||||| | || || |||||||| || || ||||| ||||| |
Sbjct 3702 AAGCTGCTTACCAGCAAAGATGAGCCTCTGTTGATCTGGTGGGATCCCTTCCTTGTCCTG 3643
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
|| ||||| || || | | | ||| |||| | || || || | ||||| || ||
Sbjct 3642 TATCTTTGCTTTCACATTGTCAATAGTATCAGAGCTCTCCACCTCCAATGTGATTGTCTT 3583
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| ||||| |||||||||||||||||
Sbjct 3582 CCCAGTCAGAGTCTTCACAAAGATCTGCAT 3553
Score = 95.1 bits (104), Expect = 1e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
||||||||||| |||||||||| || | ||| || ||||| || | ||| || ||
Sbjct 3323 CCTCCTCTCAAACGCAACACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGCA 3264
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||||| || ||||| || ||||||| || | || || ||||| |||
Sbjct 3263 AGAGTCCTCCCRTCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGGGGGA 3204
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
||||| || ||||| | ||| ||||| || || | | | || || | || ||
Sbjct 3203 ATACCCTCCTTGTCTTGAATCTTTGCTTTCACATTGTCAATGGTATCTGAACTCTCAACC 3144
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| | || || || || ||||| | ||| || ||||| || |||||||
Sbjct 3143 TCCAATGTAATTGTCTTCCCAGTCAAAGTCTTGACAAAAATTTGCATGC 3095
Score = 89.7 bits (98), Expect = 5e-13
Identities = 165/242 (68%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| ||| || || ||||| | || | || | ||||| || ||||| || || |
Sbjct 3108 AAAAATTTGCATGCCACCTCTAAGGCGAAGAACAAGGTGCAGGGTTGATTCTTTCTGAAT 3049
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
||| ||||| || || | |||||| || || ||||| ||||||| ||||| ||
Sbjct 3048 GTTGTAATCTGCCAACGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAGATCAATCTCTG 2989
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
||| |||||||||||||| || ||||| | || ||||| || || | ||| || ||
Sbjct 2988 CTGGTCTGGAGGAATACCCTCCTTGTCTTGGATCTTTGCTTTAACATTGTCGATGGTATC 2929
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || || | || || || || || || | || || ||||| || |||||
Sbjct 2928 TGAACTCTCAACCTCCAAAGTAATTGTCTTCCCTGTCAATGTCTTGACAAATATTTGCAT 2869
Query 95008 GC 95009
||
Sbjct 2868 GC 2867
>seq30006
Length=21699
Score = 118 bits (130), Expect = 9e-22
Identities = 122/157 (78%), Gaps = 2/157 (1%)
Strand=Plus/Minus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
||| || ||||| |||||| | ||||| |||| ||||| || || ||||||||||| ||
Sbjct 12859 ATCTTCGAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCCGGTGGAATACCTTCCTT 12800
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGT-CGACGTCAATCGTGA 94970
||| | ||| || || ||||| | | | |||||| || || | | || |||| |||||
Sbjct 12799 GTCTTGAATCTTAGCTTTGACATTGTCAATAGTGTC-GCTTGATTCAACTTCAAGCGTGA 12741
Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || || |||||||||||||| |||||||||||
Sbjct 12740 TCGTCTTCCCCGTAAGAGTTTTCACGAAGATCTGCAT 12704
>seq544
Length=28317
Score = 109 bits (120), Expect = 5e-19
Identities = 154/213 (72%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870
||||| || | ||| | ||| ||||| || || | | ||| || |||||||| ||
Sbjct 22248 GTAGACTCGTCTTGGATGTTGTAATCAGCAATTGTTTGGCCATCTTCAAGCTGTTTCCCA 22307
Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930
||||||| || || |||||||||||||||| ||||| ||||| | ||| || || ||
Sbjct 22308 GCAAAGATCAACCTCCGCTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTAGCTTTT 22367
Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990
|| | | |||||||| | ||||| |||| |||||||| ||||| | || ||
Sbjct 22368 ACATTATCAATAGTGTCAGAGCTCTCGACCTCAAGAGTGATGGTCTTTCCGATGAGCGTC 22427
Query 94991 TT--CACAAAGATCTGCATGCTTACAACATATT 95021
|| ||||| |||||||| || | ||||||||
Sbjct 22428 TTAAAACAAATATCTGCAT-CTCA-AACATATT 22458
Score = 89.7 bits (98), Expect = 5e-13
Identities = 114/156 (73%), Gaps = 1/156 (1%)
Strand=Plus/Plus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
|||||| || || || ||| |||||| | ||| | ||| ||| ||||||| ||||| ||
Sbjct 21919 ATCCTCAAGTTGCTTGCCGG-AAAGATCAGTCTCTTCTGGTCTAGAGGAATCCCTTCCTT 21977
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
|| | |||||| ||||| ||| | | | | || | || || |||| |||||
Sbjct 21978 ATCCTGAATTTTGGCCTTCACGTTGTCAATTATATCTGAACTTTCAACTTCAAGGGTGAT 22037
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||| ||||||||||| | || ||||||||||||||
Sbjct 22038 GGTCTTTCCAGTAAGTATCTTGACAAAGATCTGCAT 22073
>seq16835
Length=8075
Score = 89.7 bits (98), Expect = 5e-13
Identities = 142/200 (71%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 94810 AGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTT 94867
||| || ||||| || | ||| || ||| || || || || |||||| ||||| |||
Sbjct 6904 AGTGGACTCCTTCTGGATGTTGTAGTCGG-CA-AGAGTACGACCATCCTCAAGCTGCTTT 6961
Query 94868 CCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCC 94927
||| | || || || | ||||| ||||| ||||| ||||| ||||| | || || ||
Sbjct 6962 CCGGCGAAAATCAAACGCTGCTGGTCTGGGGGAATCCCTTCCTTGTCCTGGATCTTGGCT 7021
Query 94928 TTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGA 94987
||||| | ||| ||||| | || || || | ||||| || || || || ||
Sbjct 7022 TTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTGATCGTCTTCCCCGTTAGG 7081
Query 94988 GTTTTCACAAAGATCTGCAT 95007
|||||||| |||||||||||
Sbjct 7082 GTTTTCACGAAGATCTGCAT 7101
>seq558
Length=67963
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/213 (70%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCTCATAGTGTTGGA--ATC 94854
||| | ||| | || |||||||| || | ||| || || ||| || ||| | |||
Sbjct 63843 CACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCT---AGCGTTCGGCCATC 63787
Query 94855 CTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTC 94914
||| ||||| ||||| |||| || || || ||||| ||||| || || ||||| |||||
Sbjct 63786 CTCAAGCTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTC 63727
Query 94915 ATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGT 94974
| ||| || ||||| || | | | ||||| | || || || | || || ||
Sbjct 63726 CTGAATCTTAGCCTTAACATTGTCAATGGTGTCTGATGACTCTACCTCTAAGGTAATAGT 63667
Query 94975 TTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || |||||||||||||||||
Sbjct 63666 CTTGCCCGTTAGGGTCTTCACAAAGATCTGCAT 63634
Score = 84.2 bits (92), Expect = 2e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
|||||| ||||| || ||| | || || |||| ||||| ||||| ||||| ||||| ||
Sbjct 17163 ATCCTCGAGCTGCTTACCGGCGAAAATCAATCGCTGCTGGTCTGGTGGAATGCCTTCCTT 17222
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
||| | ||| || ||||| || | | | ||||| | || || || | || ||
Sbjct 17223 GTCTTGAATCTTAGCCTTAACATTGTCAATGGTGTCTGATGACTCTACCTCTAAGGTAAT 17282
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || || |||||||||||||||||
Sbjct 17283 AGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 17318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448050299516400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |