Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20habrochaites_20[genbank_20GCA_5F000577655.1_202014-02-21] 42,990 sequences; 724,284,658 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq728 95.1 3e-14 >seq728 Length=46982 Score = 95.1 bits (104), Expect = 3e-14 Identities = 125/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 22483 TTCGCGGAACGTCTTATTGCATTTGC-TGTGGTTGAAGGCATTTTCTTTTCTGGAGCATT 22541 |||||||| ||| | | || ||||| |||| ||||||| |||||||| ||| || Sbjct 2409 TTCGCGGAGCGTTTGGTGGCTTTTGCCTGTG-TTGAAGGGATTTTCTTCAGCGGAAGCTT 2351 Query 22542 TTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGA 22601 ||| | || |||||| | |||||||| | | ||||| || |||| || |||||||| Sbjct 2350 CTGTTCGATATTTTGGTTGAAAAAACGGGGGTTAATGCCTGGATTAACCTTCTCAAATGA 2291 Query 22602 GTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATA 22652 ||||||| |||| || ||| | || |||||||||||| |||| || Sbjct 2290 GTTAATTTCAAGAGACGAAGGTTTGCACTGTGATTTTGCGTGTTTGCTTTA 2240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302635700618180