Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20habrochaites_20[genbank_20GCA_5F000577655.1_202014-02-21]
42,990 sequences; 724,284,658 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq545 127 2e-24
seq796 118 1e-21
seq30006 104 2e-17
seq4902 98.7 1e-15
seq3886 95.1 1e-14
seq572 95.1 1e-14
seq16835 89.7 5e-13
seq558 87.8 2e-12
seq544 84.2 2e-11
>seq545
Length=31085
Score = 127 bits (140), Expect = 2e-24
Identities = 158/214 (74%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || || |||||||| ||||||||||| || | || || | |||
Sbjct 2396 AGGACAAGGTGAAGGGTAGACTCTTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCATCT 2337
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||| || || ||| | || |||| ||||||||| || ||||| ||||| || |||
Sbjct 2336 TCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCT 2277
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | |||| ||||| ||| || | || || | || || || | ||||| ||
Sbjct 2276 TG-AATTTTAGCTTTGACATTATCGATGGTGTCTGAGCTCTCGACCTCAAGAGTTATAGT 2218
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
||| ||||||| |||||| || || |||||||||
Sbjct 2217 CTTCCCGGTCAGAGTTTTAACAAAGATTTGCATT 2184
Score = 123 bits (136), Expect = 2e-23
Identities = 158/215 (73%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || |||| || || || ||||| ||||||||||| || | || || | ||
Sbjct 2625 AAGGACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCATC 2566
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||||||||| || || ||| | || |||| ||||||||| || ||||| ||||| || ||
Sbjct 2565 TTCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTGTC 2506
Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409
||| | |||| ||||| ||| || | || || | || || || | ||||| |
Sbjct 2505 TTG-AATTTTAGCTTTGACATTATCGATGGTGTCTGAGCTCTCGACCTCAAGAGTTATAG 2447
Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|||| ||||||| |||||| || || |||||||||
Sbjct 2446 TCTTCCCGGTCAGAGTTTTAACAAAGATTTGCATT 2412
Score = 118 bits (130), Expect = 1e-21
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
|||||| || | || || || ||||||| || || ||||| || ||||| || |||||
Sbjct 3780 ACCGCCACGGAGCCTCAGGACAAGATGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGC 3721
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| | || ||||||||||| || ||| | ||||||| ||| || || || ||
Sbjct 3720 AAGGGTGCGACCATCCTCAAGCTGCTTACCAGCAAAGATGAGCCTCTGTTGATCTGGTGG 3661
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394
|| ||||| || || |||| | |||||||| ||| || | |||||| | ||||
Sbjct 3660 GATCCCTTCCTTGTCCTGTA-TCTTTGCTTTCACATTGTCAATAGTATCAGAGCTCTCCA 3602
Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| || | || | ||||| || |||| ||| || || || || |||||
Sbjct 3601 CCTCCAATGTGATTGTCTTCCCAGTCAGAGTCTTCACAAAGATCTGCAT 3553
Score = 100 bits (110), Expect = 3e-16
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || || |||||||| ||||||||||| || | || || | |||
Sbjct 2168 AGGACAAGRTGAAGGGTAGACTCTTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCATCT 2109
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||| || || ||| | || || | |||||| || |||||||| ||||| || |||
Sbjct 2108 TCAAGCTGTTTCCCAGCAAAGATCAGTCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCT 2049
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | | || ||||| ||| || | || ||| || || || | ||| | |||
Sbjct 2048 TG-AATCTTAGCTTTGACATTATCAATGGTGTCAGAACTCTCGACCTCAAGAGTGATGGT 1990
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| ||||| | || || || || || |||||
Sbjct 1989 CTTTCCGGTGAGTGTCTTAACAAATATCTGCAT 1957
Score = 100 bits (110), Expect = 3e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || || | || |||||||| ||||||||||||||||| | || | | ||
Sbjct 3081 AAGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTAATCTGCCAACGTCCTTCCATC 3022
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||||| ||||| || ||| | || | | ||||||||| |||||||| || || || ||
Sbjct 3021 CTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGAGGAATACCCTCCTTGTC 2962
Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409
||| | | |||||||| ||| || | ||||| || || || | ||| | |
Sbjct 2961 TTGGA-TCTTTGCTTTAACATTGTCGATGGTATCTGAACTCTCAACCTCCAAAGTAATTG 2903
Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| || ||||| || || || || ||||||||
Sbjct 2902 TCTTCCCTGTCAATGTCTTGACAAATATTTGCAT 2869
Score = 96.9 bits (106), Expect = 3e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| || | || || ||| || ||||| | || || ||||| ||||| ||||| || ||
Sbjct 2867 CCACCCCTCAGTCGAAGAACAAGATGTAAGGTAGACTCTTTCTGAATATTGTAGTCAGCC 2808
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||| | | || ||||| |||||||||||| | || || | ||||||||| ||||||
Sbjct 2807 AGGGTCCTTCCATCCTCAAGTTGCTTGCCGGCAAAGATCAGTCTCTGCTGGTCTGGAGGA 2748
Query 64337 ATTCCTTCTTTTTCTTGTATTTT 64359
|| ||||| || || || |||||
Sbjct 2747 ATCCCTTCCTTGTCCTGAATTTT 2725
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 64234 CACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTC 64293
||| ||||| | || || || || || |||||||| ||||| | || | | | || ||
Sbjct 3306 CACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGCAAGAGTCCTCCCRTCCTC 3247
Query 64294 AAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTG 64353
||| || || || ||| | || | ||||| ||||| || ||||| || || || |||||
Sbjct 3246 AAGTTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGGGGGAATACCCTCCTTGTCTTG 3187
Query 64354 TATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCT 64412
|| ||| ||||| ||| || | ||||| || || || | || | ||||
Sbjct 3186 AATCTTT-GCTTTCACATTGTCAATGGTATCTGAACTCTCAACCTCCAATGTAATTGTCT 3128
Query 64413 TGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
| || |||||||| || || |||||||||||
Sbjct 3127 TCCCAGTCAAAGTCTTGACAAAAATTTGCAT 3097
>seq796
Length=44438
Score = 118 bits (130), Expect = 1e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | |||| || ||||| || || ||||||||||| || | ||| | ||||
Sbjct 19044 AGCACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCAGCAAGGGTCCTGCCGTCC 18985
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||| || ||| | || | | ||||||||| || ||||| ||||| || ||
Sbjct 18984 TCAAGCTGCTTTCCCGCAAAGATCAATCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 18925
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | || ||| | || || || | || | ||||
Sbjct 18924 TGGATCTTAGCCTTAACATTGTCAATGGTGTCAGAGCTTTCAACCTCAAGGGTGATGGTC 18865
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|| || ||||||||||| |||||||||||||||
Sbjct 18864 TTTCCTGTCAAAGTTTTCACGAAAATTTGCATT 18832
Score = 116 bits (128), Expect = 4e-21
Identities = 108/136 (79%), Gaps = 1/136 (1%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | |||| || || |||||||||||||||||||| |||| ||| || | |||
Sbjct 18816 AGCACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCGGCGAGGGTACGGCCATCT 18757
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||||||||| ||| | || |||| ||||||||| || ||||| ||||| || ||
Sbjct 18756 TCAAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 18697
Query 64352 TGTATTTTTTGCTTTA 64367
|| | | || ||||||
Sbjct 18696 TGGA-TCTTGGCTTTA 18682
Score = 114 bits (126), Expect = 1e-20
Identities = 155/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | |||| || ||||| || || ||||||||||| || | ||| | ||||
Sbjct 19272 AGCACCAAGTGAAGRGTTGATTCCTTYTGGATGTTGTAATCAGCAAGGGTCCTGCCGTCC 19213
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||| |||||| | || | | ||||||||| || ||||| ||||| || ||
Sbjct 19212 TCAAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 19153
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | | || ||||| ||| || | || || | || || || | || | |||
Sbjct 19152 TGGA-TCTTGGCTTTAACATTGTCAATAGTGTCGGAGCTTTCAACCTCAAGGGTGATGGT 19094
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
||| ||||||||||| || || ||||||||||||
Sbjct 19093 CTTTCCGGTCAAAGTCTTCACAAAAATTTGCATT 19060
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| ||||| | | ||| || | |||| || || || || || ||||| ||||| ||
Sbjct 19515 CCACCGCGAAGACGAAGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTATAATCAGCA 19456
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||| || |||| ||||||||||| |||||| | || | | ||||||||| || |||
Sbjct 19455 AGGGTCCGGCCGTCCTCAAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCTGGTGGA 19396
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| ||||| || || || | | || ||||| ||| || | || || | || ||
Sbjct 19395 ATGCCTTCCTTGTCCTGGA-TCTTGGCTTTAACATTGTCAATAGTGTCGGAGCTTTCAAC 19337
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|| | || | |||||| |||||||| || || || ||||||||||||
Sbjct 19336 CTCAAGGGTGATGGTCTTTCCGGTCAAGGTCTTCACAAAAATTTGCATT 19288
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || || || || || ||||||||||| || | || | | ||||| | ||||
Sbjct 19719 TGAAGGGTTGACTCCTTCTGGATGTTGTAATCGGCTAATGTCCTTCCATCTTCCAACTGC 19660
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| |||||| | || | || ||||||||| || ||||| |||||||| || || |||||
Sbjct 19659 TTTCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGAATACCTTCTTTGTCCTGAATTTTG 19600
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||| ||| || | || ||| ||||| || | || | |||||||| |||
Sbjct 19599 GCCTTAACATTGTCAATGGTGTCAGAACTTTCCACCTCAAGGGTGATTGTCTTGCCAGTC 19540
Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443
|| || || || || ||||||||
Sbjct 19539 AAGGTCTTCACAAAGATTTGCAT 19517
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || ||||| |||||||| || || | || | | |||||||||||||| ||
Sbjct 20169 GTAGACTCCTTTTGGATGTTGTAGTCCGCCAGAGTCCTTCCATCTTCAAGCTGCTTCCCT 20110
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || || | ||||||||| || || ||||| || || || || || || |||
Sbjct 20109 GCAAAGATCAGTCTCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGAATCTTAGCCTTC 20050
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | |||||| ||||| || | ||||| ||| || || ||||| ||
Sbjct 20049 ACATTGTCAATGGTATCAGAACTCTCCACCTCCAAAGTTATGGTTTTCCCAGTCAAGGTC 19990
Query 64427 TTTACGAAAATTTGCAT 64443
|| || ||||| |||||
Sbjct 19989 TTCACAAAAATCTGCAT 19973
>seq30006
Length=21699
Score = 104 bits (114), Expect = 2e-17
Identities = 141/194 (73%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313
|||| |||||||||||||| || | || || | ||||| |||||||| ||||| | |
Sbjct 12893 CTTTCTGAATGTTGTAATCAGCTAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCGAAGA 12834
Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACC 64372
| | ||||||||||| || ||||| ||||| || ||||| | | || ||||| |||
Sbjct 12833 TCAATCGCTGCTGGTCCGGTGGAATACCTTCCTTGTCTTG-AATCTTAGCTTTGACATTG 12775
Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432
|| | || || | | || ||||| | || | ||||| || || | |||||| |||
Sbjct 12774 TCAATAGTGTCGCTTGATTCAACTTCAAGCGTGATCGTCTTCCCCGTAAGAGTTTTCACG 12715
Query 64433 AAAATTTGCATTTT 64446
|| || ||||||||
Sbjct 12714 AAGATCTGCATTTT 12701
>seq4902
Length=4857
Score = 98.7 bits (108), Expect = 1e-15
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||||||||| | || |||| ||| || ||| |||| || || | |||| | | ||
Sbjct 819 AGCACTAGATGTAGAGTTGATTTTTTCTGGATGCTGTAGTCCGCCAAGGTGAGGCCATCC 878
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||| || ||| |||| |||| |||||||| ||||| || ||||||| |||
Sbjct 879 TCGAGCTGCTTACCAGCAAAAATCAGCCTTTGCTGGTCTGGAGGGTTTTCTTCTTTGTCT 938
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
||||| || ||| || || | |||| | | || || || | ||| | |||
Sbjct 939 TGTATCTTGGCCTTAGCATTGTCGATAGTATTGCTGAATTCGACATCCAGAGTAATGGTT 998
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAAT-TTGC 64441
|| | ||| | |||||| ||||| || ||||
Sbjct 999 TTACTGGT-AGAGTTTTCACGAATATCTTGC 1028
>seq3886
Length=20373
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288
|||||||| | || | ||||| || ||||| |||||||| || || | ||||| |
Sbjct 13011 CTAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCCAAAGTGCGGCCA 13070
Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348
|| || ||||||||||| ||| |||| | || ||||||||| || ||||| || || ||
Sbjct 13071 TCCTCGAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTG 13130
Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408
||||| || || ||| ||| || | || || | || || || | || | |
Sbjct 13131 TCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTCTCAACCTCCAGGGTGATG 13190
Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || ||||| | || || || || ||||||||
Sbjct 13191 GTTTTCCCGGTAAGGGTCTTAACAAAGATTTGCAT 13225
Score = 82.4 bits (90), Expect = 8e-11
Identities = 139/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || || ||||| || || | |||||| | || ||||||||||| ||
Sbjct 12801 GTAGACTCCTTCTGGATATTGTAGTCAGCAAGGGTGCGGCCATCCTCAAGCTGCTTACCA 12860
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || | || ||||||||| || || || || || || || || | | || |||||
Sbjct 12861 GCGAAGATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTG-AATCTTAGCTTT 12919
Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425
||| || | || ||| ||||| || | ||| | |||||| |||||||| ||
Sbjct 12920 CACATTGTCGATGGTGTCAGAACTCTCCACCTCCAAAGTGATGGTCTTCCCGGTCAAGGT 12979
Query 64426 TTTTACGAAAATTTGCATT 64444
|| || || || ||||||
Sbjct 12980 CTTCACAAAGATCTGCATT 12998
>seq572
Length=122185
Score = 95.1 bits (104), Expect = 1e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288
|| || || || |||| || |||||||| |||||||||||||| |||| ||| | | |
Sbjct 87958 CTCAGAACAAGGTGAAGAGTTGATTCTTTCTGAATGTTGTAATCAGCGAGGGTTCTCCCA 88017
Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348
||||| | ||| || || ||| |||| || | |||||| || ||||| || ||||||||
Sbjct 88018 TCTTCCAACTGTTTTCCAGCAAAAATCAGTCTCTGCTGATCAGGAGGTATGCCTTCTTTA 88077
Query 64349 TCTTG 64353
|| ||
Sbjct 88078 TCCTG 88082
>seq16835
Length=8075
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| ||||| | || || || || || |||||||| || || | || || | ||
Sbjct 6890 AGCACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTACGACCATCC 6949
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||| ||||| |||| | ||||||||||| || ||||| ||||| || ||
Sbjct 6950 TCAAGCTGCTTTCCGGCGAAAATCAAACGCTGCTGGTCTGGGGGAATCCCTTCCTTGTCC 7009
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | | || ||||| ||| || | || || | || || |||| || | ||
Sbjct 7010 TGGA-TCTTGGCTTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTGATCGT 7068
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
||| || || | ||||| ||||| || ||||| ||
Sbjct 7069 CTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 7104
>seq558
Length=67963
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
|||||| || || | || ||||| || || |||||||| || || | || || | ||
Sbjct 63846 AAGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCTAGCGTTCGGCCATC 63787
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||||||||||| || ||| |||| | || ||||||||| || || || ||||| || ||
Sbjct 63786 CTCAAGCTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTC 63727
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| || || ||| ||| || | || || | || || |||| || | ||
Sbjct 63726 CTGAATCTTAGCCTTAACATTGTCAATGGTGTCTGATGACTCTACCTCTAAGGTAATAGT 63667
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|||||| || | || || || || || ||||||||
Sbjct 63666 CTTGCCCGTTAGGGTCTTCACAAAGATCTGCATTTT 63631
Score = 86.0 bits (94), Expect = 6e-12
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| || || | || || | || || |||||||| |||
Sbjct 17122 GTGGACTCCTTCTGGATGTTGTAGTCAGCTAGCGTTCGGCCATCCTCGAGCTGCTTACCG 17181
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| |||| | ||||||||||| || ||||| ||||| || ||||| || || |||
Sbjct 17182 GCGAAAATCAATCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCTTGAATCTTAGCCTTA 17241
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | || || | || || |||| || | |||||||| |||| ||
Sbjct 17242 ACATTGTCAATGGTGTCTGATGACTCTACCTCTAAGGTAATAGTCTTGCCCGTCAGGGTC 17301
Query 64427 TTTACGAAAATTTGCATTTT 64446
|| || || || ||||||||
Sbjct 17302 TTCACAAAGATCTGCATTTT 17321
>seq544
Length=28317
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/215 (70%), Gaps = 3/215 (1%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || || | || || | ||| ||||||||||||||||| | ||| | | ||
Sbjct 21633 AAGAACAAGGTGCAGGGTTGACTGTTTCTGAATGTTGTAATCTGCCAAGGTCCTTCCATC 21692
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAAT-TCCTTCTTTTT 64349
|||||| |||| || ||| | || | | |||||||| |||||||| ||| |||| |
Sbjct 21693 TTCAAGTTGCTCTCCAGCAAATATCAATCTCTGCTGGTTTGGAGGAATACCCTCCTTTGT 21752
Query 64350 CTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408
|||| | | |||||||| ||| | | ||||| || || || | ||| |
Sbjct 21753 CTTGGA-TCTTTGCTTTAACATTGTTGATAGTATCTGAACTCTCAACCTCCAAAGTAATT 21811
Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| || ||||| || || || || ||||||||
Sbjct 21812 GTCTTCCCTGTCAATGTCTTAACAAATATTTGCAT 21846
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499376303375600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |