Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20habrochaites_20[genbank_20GCA_5F000577655.1_202014-02-21]
42,990 sequences; 724,284,658 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq796 114 1e-20
seq3886 113 4e-20
seq545 111 1e-19
seq30006 102 7e-17
seq16835 100 3e-16
seq544 100 3e-16
seq558 95.1 1e-14
seq3956 87.8 2e-12
>seq796
Length=44438
Score = 114 bits (126), Expect = 1e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || ||| | || || | ||||| || || || || || || || ||| | ||
Sbjct 19061 ATGCAAATTTTTGTGAAGACTTTGACCGGAAAGACCATCACCCTTGAGGTTGAAAGCTCC 19120
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| |||||||| ||||| ||||| || || || || ||
Sbjct 19121 GACACTATTGACAATGTTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 19180
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||||||| || ||||| ||||| || | | | | ||||| |||
Sbjct 19181 CAGAGATTGATCTTTGCCGGAAAGCAGCTTGAGGACGGCAGGACCCTTGCTGATTACAAC 19240
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || |||||||| || || |||||||||
Sbjct 19241 ATCCARAAGGAATCAACYCTTCACTTGGTG 19270
Score = 109 bits (120), Expect = 5e-19
Identities = 153/212 (72%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| ||| | ||||| || || || || || || || || || || ||| | |
Sbjct 18604 GATGCAGATATTTGTCAAAACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAAAGCTC 18663
Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
||||| | || |||| |||| | || |||||| ||||| ||||| || || || || |
Sbjct 18664 AGACACCATTGACAACGTTAAAGCCAA-GATCCAGGACAAGGAAGGCATTCCCCCAGACC 18722
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| || | |||||||||| || || ||||| || ||| | | | | | ||||| |
Sbjct 18723 AGCAGAGGCTGATCTTTGCGGGCAAGCAGCTTGAAGATGGCCGTACCCTCGCCGATTACA 18782
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913
|||||||||| || || || || |||||||||
Sbjct 18783 ACATTCAAAAAGAGTCCACTCTTCACTTGGTG 18814
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || ||| | || || | ||||| || || || || || || || ||| | ||
Sbjct 19289 ATGCAAATTTTTGTGAAGACCTTGACCGGAAAGACCATCACCCTTGAGGTTGAAAGCTCC 19348
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| |||||||| ||||| ||||| || || || || ||
Sbjct 19349 GACACTATTGACAATGTTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCACCAGACCAG 19408
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||||||| || ||||| ||||| | | | | | |||||||||
Sbjct 19409 CAGAGATTGATCTTTGCCGGAAAGCAGCTTGAGGACGGCCGGACCCTTGCTGATTATAAC 19468
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || || |||||||| | || | ||||| ||
Sbjct 19469 ATCCAGAAGGAGTCAACCCTTCACTTGGTCCTTCGTCTTCGCGGTGG 19515
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | ||||| | || || || || || || || || || ||| | |
Sbjct 18833 ATGCAAATTTTCGTGAAAACTTTGACAGGAAAGACCATCACCCTTGAGGTTGAAAGCTCT 18892
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| ||||| || || || || ||
Sbjct 18893 GACACCATTGACAATGTTAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 18952
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||||||| || || ||||| ||||| || | | | | ||||| |||
Sbjct 18953 CAGAGATTGATCTTTGCGGGAAAGCAGCTTGAGGACGGCAGGACCCTTGCTGATTACAAC 19012
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || |||||||| || || |||||||||
Sbjct 19013 ATCCAGAAGGAATCAACCCTTCACTTGGTG 19042
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| |||||| | || || | || || || || || || || || || ||| |
Sbjct 19516 GATGCAAATCTTTGTGAAGACCTTGACTGGCAAGACAATCACCCTTGAGGTGGAAAGTTC 19575
Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
||||| | || || | ||| | ||| || || ||||||||||| || || || || |
Sbjct 19576 TGACACCATTGACAATGTTAAGGCCAAA-ATTCAGGACAAAGAAGGTATTCCACCAGACC 19634
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| || | |||||||||||||| || ||| |||| ||| || | | | ||||| |
Sbjct 19635 AGCAGAGGTTGATCTTTGCCGGAAAGCAGTTGGAAGATGGAAGGACATTAGCCGATTACA 19694
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|||| || ||||| || || || |||||||| ||||
Sbjct 19695 ACATCCAGAAGGAGTCAACCCTTCACTTGGTCCTGCG 19731
>seq3886
Length=20373
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| |||| || || ||||| ||||| || || || || || || | ||
Sbjct 13225 ATGCAAATCTTTGTTAAGACCCTTACCGGGAAAACCATCACCCTGGAGGTTGAGAGCTCC 13166
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 13165 GACACCATTGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAG 13106
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||| ||||| || || ||||| |||||| | | || | || || |||
Sbjct 13105 CAGAGGTTGATTTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACTTTGGCGGACTACAAC 13046
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| |||||||| ||||| || |||||||||
Sbjct 13045 ATCCAAAAGGAGTCGACCCTGCACTTGGTG 13016
Score = 105 bits (116), Expect = 6e-18
Identities = 152/212 (72%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | ||||| || ||||| || ||||| || || || || ||| |
Sbjct 14138 GATGCAGATCTTCGTGAAAACTCTCACCGGAAAGACTATCACCCTAGAGGTGGAAAGTTC 14079
Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
|| ||| | || |||| ||| | |||||||| ||||| ||||| || || || ||||
Sbjct 14078 TGATACAATCGACAACGTTAAGGC-TAAGATCCAGGACAAGGAAGGGATTCCCCCTGATC 14020
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| ||| | | ||||| ||||| || ||| ||||||| | | | | |||||||
Sbjct 14019 AGCAAAGGCTTATCTTCGCCGGAAAGCAGTTGGAGGACGGACGGACTCTAGCTGATTATA 13960
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913
|||| || ||||| || || || || ||||||
Sbjct 13959 ACATCCAGAAGGAGTCCACCCTCCATTTGGTG 13928
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || ||||| || ||||| || || || ||| | |
Sbjct 13909 ATGCAGATCTTCGTGAAGACTCTTACGGGTAAGACGATTACCCTTGAGGTCGAAAGCTCA 13850
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| || || ||||| || || || || ||
Sbjct 13849 GACACCATTGACAACGTCAAGGCTAAGATCCAGGATAAGGAAGGCATTCCCCCAGACCAG 13790
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||||||| || || ||| |||| ||| | | | | | || || |||
Sbjct 13789 CAGAGGTTGATCTTTGCAGGAAAGCAGTTGGAAGATGGCCGCACCCTAGCTGACTACAAC 13730
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || ||||| || || || || ||||||
Sbjct 13729 ATCCAGAAGGAGTCCACCCTCCATTTGGTG 13700
Score = 87.8 bits (96), Expect = 2e-12
Identities = 145/208 (70%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| |||| || || ||||| || || || || | || || ||| | ||
Sbjct 13681 ATGCAGATCTTCGTTAAGACTCTTACCGGAAAGACCATCACTTTGGAGGTGGAAAGCTCC 13622
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| || || ||||| || || || || ||
Sbjct 13621 GACACCATTGACAACGTGAAGGCTAAGATCCAGGATAAGGAAGGGATCCCCCCAGACCAG 13562
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||| || ||||| ||||| |||||| | | | | | || || |||
Sbjct 13561 CAGAGGTTGATCTTCGCTGGGAAGCAGCTCGAGGATGGCCGCACCTTAGCTGACTACAAC 13502
Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910
|| || ||||| || || || || ||||
Sbjct 13501 ATCCAGAAGGAGTCTACCCTCCATCTTG 13474
>seq545
Length=31085
Score = 111 bits (122), Expect = 1e-19
Identities = 149/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| ||||||| || ||||| || ||||| || || || || || | |
Sbjct 2413 ATGCAAATCTTTGTTAAAACTCTGACCGGGAAGACTATAACTCTTGAGGTCGAGAGCTCA 2472
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| || || |||||||| ||||| || || || || ||
Sbjct 2473 GACACCATCGATAATGTCAAAGCTAAAATTCAAGACAAGGAAGGTATTCCCCCAGACCAG 2532
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAA-ACATGTCAGATTATAA 24882
|| | |||||||||| ||||||||||| || ||| ||| || || | ||||| ||
Sbjct 2533 CAGAGGCTGATCTTTGCTGGGAAACAGCTTGAAGATGGCCGAACACTTG-CTGATTACAA 2591
Query 24883 CATTCAAAAGGAATCGACACTACAC 24907
||| |||||||| || || || |||
Sbjct 2592 CATCCAAAAGGAGTCCACCCTTCAC 2616
Score = 111 bits (122), Expect = 1e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || | || || || || || || | || || || |
Sbjct 3324 GATGCAGATCTTTGTGAAGACTTTGACTGGGAAGACAATCACATTGGAGGTTGAGAGTTC 3383
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || | || ||| |||||| |||||||| || || || || || || ||
Sbjct 3384 AGATACCATTGACAATGTGAAAGCAAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCA 3443
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| |||||||||||||| || ||||| || ||||| ||| | | |||| || ||
Sbjct 3444 ACAGCGTTTGATCTTTGCTGGTAAACAWCTTGAGGAYGGGAGGACTCTTGCAGACTACAA 3503
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || ||||| || || || || |||||||||| ||| | |||||
Sbjct 3504 CATCCAGAAGGAGTCAACTCTCCATCTGGTGTTGCGTTTGAGAGGAGG 3551
Score = 107 bits (118), Expect = 2e-18
Identities = 152/210 (72%), Gaps = 3/210 (1%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| ||| |||| || || ||||| || || || || || || || || |
Sbjct 1956 GATGCAGATATTTGTTAAGACACTCACCGGAAAGACCATCACTCTTGAGGTCGAGAGTTC 2015
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || ||| ||||| |||||||| ||||| || ||||| |||||
Sbjct 2016 TGACACCATTGATAATGTCAAAGCTAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCA 2075
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAA-ACATGTCAGATTATA 24881
|| | |||||||||| ||||||||||| || ||| ||| || || | ||||| |
Sbjct 2076 GCAGAGACTGATCTTTGCTGGGAAACAGCTTGAAGATGGCCGAACACTTG-CTGATTACA 2134
Query 24882 ACATTCAAAAGGAATCGACACTACA-CTTG 24910
|||| ||||| || || || || || ||||
Sbjct 2135 ACATCCAAAAAGAGTCTACCCTTCAYCTTG 2164
Score = 105 bits (116), Expect = 6e-18
Identities = 148/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| ||||||| || ||||| || ||||| || || || || || | |
Sbjct 2185 ATGCAAATCTTTGTTAAAACTCTGACCGGGAAGACTATAACTCTTGAGGTCGAGAGCTCA 2244
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| || || |||||||| ||||| || || || || ||
Sbjct 2245 GACACCATCGATAATGTCAAAGCTAAAATTCAAGACAAGGAAGGTATTCCCCCAGACCAG 2304
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAA-ACATGTCAGATTATAA 24882
|| | |||||||||| ||||||||||| || ||| ||| || || | ||||| ||
Sbjct 2305 CAGAGGCTGATCTTTGCTGGGAAACAGCTTGAAGATGGCCGAACACTTG-CTGATTACAA 2363
Query 24883 CATTCAAAAGGAATCGACACTACAC 24907
||| ||||| || || || || |||
Sbjct 2364 CATCCAAAAAGAGTCTACCCTTCAC 2388
Score = 105 bits (116), Expect = 6e-18
Identities = 114/152 (75%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| ||| |||||| |||||||| || || || || || || ||||| ||||||||||||
Sbjct 3172 GTGAAAGCAAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAACAGCGTTTGATCTTT 3231
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898
|| || ||||| || ||||| ||| | | |||| || ||||| || ||||| ||
Sbjct 3232 GCTGGTAAACAACTTGAGGAYGGGAGGACTCTTGCAGACTACAACATCCAGAAGGAGTCA 3291
Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || || |||||||||| ||| | |||||
Sbjct 3292 ACTCTCCATCTGGTGTTGCGTTTGAGAGGAGG 3323
Score = 89.7 bits (98), Expect = 5e-13
Identities = 161/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || || || || || ||||| ||| ||
Sbjct 2641 ATGCAGATCTTTGTCAAGACACTTACTGGAAAGACCATCACCCTTGAAGTTGAAAGTTCC 2700
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || |||| || | ||| || || ||||| ||||| || ||||| || ||
Sbjct 2701 GATACCATTGACAACGTGAAGGCCAAA-ATTCAGGACAAGGAAGGGATTCCTCCAGACCA 2759
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | ||||||||||||| || || || |||||| || | | || | || || ||
Sbjct 2760 GCAGAGACTGATCTTTGCCGGCAAGCAACTTGAGGATGGAAGGACCCTGGCTGACTACAA 2819
Query 24883 CATTCAAAAGGAATCGACACTACA-CTTGGTGTTGCGATTGCGCGGAGGC 24931
||||| || || || || |||| |||| | || ||| || | || |||
Sbjct 2820 TATTCAGAAAGAGTCTACCTTACATCTTGTTCTT-CGACTGAGGGGTGGC 2868
Score = 89.7 bits (98), Expect = 5e-13
Identities = 97/129 (75%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| ||| ||||||||||||||| || || || ||||| || || || | |||||||||
Sbjct 2944 GTTAAAGCAAAGATCCAAGACAAGGAGGGTATTCCTCCAGACCAGCAGAGATTGATCTTT 3003
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898
|| || || || || |||||| || | || ||||||| |||||||| || |||||
Sbjct 3004 GCTGGAAAGCAACTTGAGGATGGAAGGACGTTGGCAGATTACAACATTCAGAAAGAATCA 3063
Query 24899 ACACTACAC 24907
|| || |||
Sbjct 3064 ACCCTGCAC 3072
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/209 (69%), Gaps = 1/209 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || || || || || || || || | || || || | |
Sbjct 3552 GATGCAGATCTTTGTGAAGACTCTGACTGGGAAGACAATCACATTGGAGGTGGAGAGCTC 3611
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || | || ||| |||||| || ||||| ||||| || || || |||||
Sbjct 3612 TGATACTATTGACAATGTGAAAGCAAAGATACAGGACAAGGAAGGGATCCCACCAGATCA 3671
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | | |||||||| || || ||||| |||||| | | | | |||| |||||
Sbjct 3672 ACAGAGGCTCATCTTTGCTGGTAAGCAGCTTGAGGATGGTCGCACCCTTGCAGACTATAA 3731
Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910
||| || || || || || || || ||||
Sbjct 3732 CATCCAGAAAGAGTCTACTCTTCATCTTG 3760
>seq30006
Length=21699
Score = 102 bits (112), Expect = 7e-17
Identities = 138/191 (72%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | ||||| || || || || || || ||||| ||||| ||| | | |
Sbjct 12704 ATGCAGATCTTCGTGAAAACTCTTACGGGGAAGACGATCACGCTTGAAGTTGAATCAAGC 12763
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| ||||| |||||||| ||||| || || || || ||
Sbjct 12764 GACACTATTGACAATGTCAAAGCTAAGATTCAAGACAAGGAAGGTATTCCACCGGACCAG 12823
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||| ||||| || ||||| || ||| | | | | ||||| |||
Sbjct 12824 CAGCGATTGATCTTCGCCGGAAAGCAGCTCGAAGATGGACGTACTCTAGCTGATTACAAC 12883
Query 24884 ATTCA-AAAGG 24893
||||| |||||
Sbjct 12884 ATTCAGAAAGG 12894
>seq16835
Length=8075
Score = 100 bits (110), Expect = 3e-16
Identities = 148/206 (72%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | ||||| ||||| || || || || || || || || || | |
Sbjct 7102 GATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACCCTAGAGGTTGAGTCTTC 7043
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || ||| |||||||| ||||| ||||| || || || || ||
Sbjct 7042 CGACACCATCGACAATGTCAAAGCCAAGATCCAGGACAAGGAAGGGATTCCCCCAGACCA 6983
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTAT 24880
|| |||||||| || ||||| || ||||| |||||| ||| | | || | || ||
Sbjct 6982 GCAGCGTTTGATTTTCGCCGGAAAGCAGCTTGAGGATGGTCG-TACTCTTG-CCGACTAC 6925
Query 24881 AACATTCAAAAGGAATCGACACTACA 24906
||||| || ||||| || || || ||
Sbjct 6924 AACATCCAGAAGGAGTCCACTCTCCA 6899
>seq544
Length=28317
Score = 100 bits (110), Expect = 3e-16
Identities = 145/201 (72%), Gaps = 4/201 (2%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATT--AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
||||||||| ||| || || ||||| | ||| || || || || || || || || |
Sbjct 22447 GATGCAGATATTTGTTTTAAGACGCTCATCGGAAAGACCATCACTCTTGAGGTCGAGAGC 22388
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
| ||||| | || | |||||| ||||| |||||||| ||||| || ||||| |||
Sbjct 22387 TCTGACACTATTGATAATGTAAAAGCTAAGATTCAAGACAAGGAAGGCATTCCTCCAGAT 22328
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC-ATGTCAGATTA 24879
|| | | ||||||||||| ||||||||||| || || | | |||| || | |||||
Sbjct 22327 CAGCGGAGGTTGATCTTTGCTGGGAAACAGCTTGAAGA-TGGCCAAACAATTGCTGATTA 22269
Query 24880 TAACATTCAAAAGGAATCGAC 24900
||||| ||| | || || ||
Sbjct 22268 CAACATCCAAGACGAGTCTAC 22248
>seq558
Length=67963
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || ||||| || || |||||||| | || ||||| | |
Sbjct 63634 ATGCAGATCTTTGTGAAGACCCTAACGGGCAAGACTATTACCTTAGAGGTAGAGTCATCA 63693
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| ||||| || || || || ||
Sbjct 63694 GACACCATTGACAATGTTAAGGCTAAGATTCAGGACAAGGAAGGCATCCCACCAGACCAG 63753
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||| ||||| || || ||||| |||||| ||| | | || || |||
Sbjct 63754 CAGAGGTTGATTTTTGCAGGAAAGCAGCTTGAGGATGGCCGAACGCTAGCTGACTACAAC 63813
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || |||||||| || || ||| | |||
Sbjct 63814 ATCCAGAAGGAATCCACCCTCCACCTTGTG 63843
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || |||||||| | || ||||| | |
Sbjct 17318 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACTATTACCTTAGAGGTAGAGTCATCA 17259
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| |||||||| ||||| || || || || ||
Sbjct 17258 GACACCATTGACAATGTTAAGGCTAAGATTCAAGACAAGGAAGGCATTCCACCAGACCAG 17199
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || ||||| || ||||| || ||||| |||||| ||| | | || || |||
Sbjct 17198 CAGCGATTGATTTTCGCCGGTAAGCAGCTCGAGGATGGCCGAACGCTAGCTGACTACAAC 17139
Query 24884 ATTCAAAAGGAATCGACACTACAC 24907
|| || ||||| || || || |||
Sbjct 17138 ATCCAGAAGGAGTCCACCCTCCAC 17115
>seq3956
Length=148667
Score = 87.8 bits (96), Expect = 2e-12
Identities = 151/212 (71%), Gaps = 7/212 (3%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC-A 24761
|||||| |||||| ||||||| || | || || || ||||| || || || |||| |
Sbjct 117983 GATGCAAATCTTTGTTAAAACTCTCATTGGAAAGACCATTACTCTGGATGT-GAAGAGTA 117925
Query 24762 CCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
|| || | | || | || ||| |||||| |||||||||||||||| || | ||||
Sbjct 117924 CCAACTCCATTGACAATGTTAAAGCAAAGATTGAAGACAAAGAAGGAATTCCCTCAGATC 117865
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTA 24879
||||| | || | | || || ||||| | ||||| || | | || || | |||||
Sbjct 117864 AACAAAGATTAGTATATGGTGGAAAACAATTTAAGGATGATC-ATACACTTG-CTGATTA 117807
Query 24880 TAACATTCAAAAGGAATCGACACTACA-CTTG 24910
|| ||||||||||| || ||| | || ||||
Sbjct 117806 CAATATTCAAAAGGAGTCTACAATTCATCTTG 117775
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449655836277200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |