Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20habrochaites_20[genbank_20GCA_5F000577655.1_202014-02-21]
42,990 sequences; 724,284,658 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq728 95.1 2e-13
>seq728
Length=46982
Score = 95.1 bits (104), Expect = 2e-13
Identities = 169/247 (68%), Gaps = 0/247 (0%)
Strand=Plus/Plus
Query 796151 CCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCGT 796210
|||||| || ||||| || |||||||| | || || |||||||| ||||||||||
Sbjct 2595 CCTCGGCAACCTGGACGTCTTTCATGAACCTTCCAGCGAGGTTCTCTAAAACGATGCCGT 2654
Query 796211 CGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGCG 796270
| ||| || |||||||| || || || |||| || || | || || | ||
Sbjct 2655 CTGAGGCAGCAAAAAAGGCAAGAACATGAGTGATGAAATGCCTTTCACCGGATGTTAGGT 2714
Query 796271 AGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCCT 796330
||||||| || |||| | ||| ||||| || || | ||||| || || |||
Sbjct 2715 TTTCCCAGTGACGAGTATCGGTGGAGAGATCGACTTCTTCTACCGTCCAGAAAGATGCCA 2774
Query 796331 CGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCGAT 796390
||| || |||||||| ||||| ||| || | || | || ||||||| | || ||||
Sbjct 2775 TGGCTTTCTTGTACATTTCCCAAATCTGTGGATACTGAATTGGGAACATACAGAATCGAT 2834
Query 796391 TGGGGTT 796397
|||||
Sbjct 2835 CTGGGTT 2841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7911673357622610
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |