Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20habrochaites_20[genbank_20GCA_5F000577655.1_202014-02-21] 42,990 sequences; 724,284,658 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq728 95.1 2e-13 >seq728 Length=46982 Score = 95.1 bits (104), Expect = 2e-13 Identities = 169/247 (68%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 796151 CCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCGT 796210 |||||| || ||||| || |||||||| | || || |||||||| |||||||||| Sbjct 2595 CCTCGGCAACCTGGACGTCTTTCATGAACCTTCCAGCGAGGTTCTCTAAAACGATGCCGT 2654 Query 796211 CGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGCG 796270 | ||| || |||||||| || || || |||| || || | || || | || Sbjct 2655 CTGAGGCAGCAAAAAAGGCAAGAACATGAGTGATGAAATGCCTTTCACCGGATGTTAGGT 2714 Query 796271 AGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCCT 796330 ||||||| || |||| | ||| ||||| || || | ||||| || || ||| Sbjct 2715 TTTCCCAGTGACGAGTATCGGTGGAGAGATCGACTTCTTCTACCGTCCAGAAAGATGCCA 2774 Query 796331 CGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCGAT 796390 ||| || |||||||| ||||| ||| || | || | || ||||||| | || |||| Sbjct 2775 TGGCTTTCTTGTACATTTCCCAAATCTGTGGATACTGAATTGGGAACATACAGAATCGAT 2834 Query 796391 TGGGGTT 796397 ||||| Sbjct 2835 CTGGGTT 2841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7911673357622610