Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20habrochaites_20[genbank_20GCA_5F000577655.1_202014-02-21] 42,990 sequences; 724,284,658 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq545 149 5e-31 seq3886 141 7e-29 seq796 138 9e-28 seq544 114 1e-20 seq30006 113 3e-20 seq558 102 6e-17 seq3956 98.7 8e-16 seq4902 82.4 6e-11 >seq545 Length=31085 Score = 149 bits (164), Expect = 5e-31 Identities = 168/223 (75%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| || || |||||||| ||||| ||||| |||| || || Sbjct 2172 ACGGAGGACAAGRTGAAGGGTAGACTCTTTTTGGATGTTGTAATCAGCAAGTGTTCGGCC 2113 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || ||||| |||||| | |||| ||| |||||||| || ||||| || || || Sbjct 2112 ATCTTCAAGCTGTTTCCCAGCAAAGATCAGTCTCTGCTGATCTGGAGGAATGCCTTCCTT 2053 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | ||||||| | || | ||||||||| || || |||||||| | Sbjct 2052 GTCTTG-AATCTTAGCTTTGACATTATCAATGGTGTCAGAACTCTCGACCTCAAGAGTGA 1994 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAA 29792 | || || || || | || ||||||||||||||||| | ||| Sbjct 1993 TGGTCTTTCCGGTGAGTGTCTTAACAAATATCTGCATCTGAAA 1951 Score = 143 bits (158), Expect = 2e-29 Identities = 164/218 (75%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| || || |||||||| ||||| ||||| |||| || || Sbjct 2400 ACGGAGGACAAGGTGAAGGGTAGACTCTTTTTGGATGTTGTAATCAGCAAGTGTTCGGCC 2341 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || ||||| |||||| | |||| || ||||| || || |||||||| || || Sbjct 2340 ATCTTCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTT 2281 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| |||||| | ||||||| | || | ||||| || || || |||||||||| Sbjct 2280 GTCTTG-AATTTTAGCTTTGACATTATCGATGGTGTCTGAGCTCTCGACCTCAAGAGTTA 2222 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||| || || || | ||||||||||| || |||||| Sbjct 2221 TAGTCTTCCCGGTCAGAGTTTTAACAAAGATTTGCATT 2184 Score = 141 bits (156), Expect = 7e-29 Identities = 156/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 ||||| ||||| || ||||| ||||| ||||| |||| || || ||| || || ||| Sbjct 2615 TGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCATCTTCAAGCTGT 2556 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || |||||| | |||| || ||||| || || |||||||| || |||||||| |||||| Sbjct 2555 TTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCTTG-AATTTT 2497 Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 | ||||||| | || | ||||| || || || |||||||||||||| || || || Sbjct 2496 AGCTTTGACATTATCGATGGTGTCTGAGCTCTCGACCTCAAGAGTTATAGTCTTCCCGGT 2437 Query 29763 TAAGGTTTTAACAAATATCTGCATT 29787 | ||||||||||| || |||||| Sbjct 2436 CAGAGTTTTAACAAAGATTTGCATT 2412 Score = 123 bits (136), Expect = 2e-23 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| |||||||||| ||||| ||| || || || || || || ||||| || || ||| Sbjct 3551 CCTCCTCTCAAACGCAACACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGCA 3492 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | || || || ||||| |||||| | ||||| | || || || || ||| Sbjct 3491 AGAGTCCTCCCRTCCTCAAGWTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGGGGGA 3432 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||| |||||||| ||| |||| ||| ||| | || | || || ||| || || Sbjct 3431 ATACCCTCCTTGTCTTG-AATCTTTGCTTTCACATTGTCAATGGTATCTGAACTCTCAAC 3373 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || || || ||||| || || || ||||| |||||||| Sbjct 3372 CTCCAATGTGATTGTCTTCCCAGTCAAAGTCTTCACAAAGATCTGCAT 3325 Score = 122 bits (134), Expect = 7e-23 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| |||||||||| ||||| ||| || || || || || || ||||| || || ||| Sbjct 3323 CCTCCTCTCAAACGCAACACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGCA 3264 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | || || |||||||| |||||| | ||||| | || || || || ||| Sbjct 3263 AGAGTCCTCCCRTCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGGGGGA 3204 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||| |||||||| ||| |||| ||| ||| | || | || || ||| || || Sbjct 3203 ATACCCTCCTTGTCTTG-AATCTTTGCTTTCACATTGTCAATGGTATCTGAACTCTCAAC 3145 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || || || ||||| || || || ||||| || ||||| Sbjct 3144 CTCCAATGTAATTGTCTTCCCAGTCAAAGTCTTGACAAAAATTTGCAT 3097 Score = 118 bits (130), Expect = 8e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 || || || |||||||| |||||||| ||||| || | || | ||| || ||||| Sbjct 3071 TGCAGGGTTGATTCTTTCTGAATGTTGTAATCTGCCAACGTCCTTCCATCCTCAAGTTGC 3012 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || |||||| | |||||||| ||||| || || ||||||||||| |||||||| | ||| Sbjct 3011 TTTCCAGCAAAGATCAATCTCTGCTGGTCTGGAGGAATACCCTCCTTGTCTTGGATCTTT 2952 Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763 ||| ||| | || | || || ||| || || || | ||| || || || || || Sbjct 2951 GCTTTAACATTGTCGATGGTATCTGAACTCTCAACCTCCAAAGTAATTGTCTTCCCTGTC 2892 Query 29764 AAGGTTTTAACAAATATCTGCAT 29786 || || || |||||||| ||||| Sbjct 2891 AATGTCTTGACAAATATTTGCAT 2869 >seq3886 Length=20373 Score = 141 bits (156), Expect = 7e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||||||||||| | |||||||| || || || || || ||||| ||||| || ||||| Sbjct 12998 TCCTCCCCTCAGCCTAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCCGC 13057 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||||| ||| ||||| || ||||||||| | ||||| || ||||| || || || Sbjct 13058 CAAAGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGGGG 13117 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||||||| |||||||| | || |||||| | || | ||||| || || || Sbjct 13118 AATACCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTCTCAAC 13177 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || ||||| || || | ||| |||||||| || ||||| Sbjct 13178 CTCCAGGGTGATGGTTTTCCCGGTAAGGGTCTTAACAAAGATTTGCAT 13225 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||||||| || ||||| || || || ||||||||||| || | || || Sbjct 13922 ACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAATCAGCTAGAGTCCGTCC 13981 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || | || || || || | || | ||||||||||| || ||||| || || || Sbjct 13982 GTCCTCCAACTGCTTTCCGGCGAAGATAAGCCTTTGCTGATCAGGGGGAATCCCTTCCTT 14041 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || || | || | || |||||| ||| || || || || || Sbjct 14042 GTCCTGGATCTTAGCCTTAACGTTGTCGATTGTATCAGAACTTTCCACCTCTAGGGTGAT 14101 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAA 29793 ||| || || || | ||||| || || |||||||| | |||| Sbjct 14102 AGTCTTTCCGGTGAGAGTTTTCACGAAGATCTGCATCTGAAAA 14144 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||||||| || ||||| || || || ||||| || || || | |||||| Sbjct 13694 ACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGGGTGCGGCC 13753 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | || || || ||| | ||||| || ||||| || || ||||| || || || Sbjct 13754 ATCTTCCAACTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTT 13813 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || | || ||||| | || | ||||| || ||| || ||||| || || Sbjct 13814 ATCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTTTCGACCTCAAGGGTAAT 13873 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || | || || || || |||||||| Sbjct 13874 CGTCTTACCCGTAAGAGTCTTCACGAAGATCTGCAT 13909 >seq796 Length=44438 Score = 138 bits (152), Expect = 9e-28 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||| ||||| ||||| |||||||||||||| ||||| || | ||| || Sbjct 18820 ACGGAGCACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCGGCGAGGGTACGGCC 18761 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || ||||| ||| | |||| || ||||| || || ||||| || || || Sbjct 18760 ATCTTCAAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTT 18701 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||| || | || | ||||| || ||| || ||||| || || Sbjct 18700 GTCCTGGATCTTGGCTTTAACGTTGTCAATGGTGTCTGAGCTTTCCACCTCAAGGGTGAT 18641 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| | |||||| |||||||||||||| Sbjct 18640 GGTCTTTCCAGTGAGGGTTTTGACAAATATCTGCAT 18605 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||| | | || ||| | |||||| || ||||| || ||||| || ||||| || Sbjct 19971 CCTCCCCTGAGCCTCAACACAAGATGAAGGGTTGATTCCTTCTGAATATTGTAATCGGCT 19912 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || | || ||||||||| | ||||| |||||||| || || || Sbjct 19911 AATGTCCTTCCATCTTCCAACTGCTTGCCAGCAAAAATCAACCTTTGCTGGTCTGGTGGG 19852 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||||||||| || ||| || | || || | || | ||||| || ||| || Sbjct 19851 ATACCCTCTTTGTCCTG-AATCTTGGCCTTTACGTTGTCAATGGTGTCGGAGCTTTCCAC 19793 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||| || ||||| |||||||| ||||| || || || || |||||| Sbjct 19792 CTCAAGGGTAATAGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCATT 19744 Score = 122 bits (134), Expect = 7e-23 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| ||||| || || || || || ||||||||||| |||| ||| || Sbjct 19504 ACGAAGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTATAATCAGCAAGGGTCCGGCC 19445 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || || || || || ||| | |||||||| ||||| || || ||||| || || || Sbjct 19444 GTCCTCAAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCTGGTGGAATGCCTTCCTT 19385 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||| ||| | || | |||||| || ||| || ||||| || || Sbjct 19384 GTCCTGGATCTTGGCTTTAACATTGTCAATAGTGTCGGAGCTTTCAACCTCAAGGGTGAT 19325 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || || ||||| || ||||| || |||||| Sbjct 19324 GGTCTTTCCGGTCAAGGTCTTCACAAAAATTTGCATT 19288 >seq544 Length=28317 Score = 114 bits (126), Expect = 1e-20 Identities = 163/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || | ||| || || | || || || || | ||| |||||||| ||||| || Sbjct 21619 CCGCCTCTAAGACGAAGAACAAGGTGCAGGGTTGACTGTTTCTGAATGTTGTAATCTGCC 21678 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | ||| || ||||| | |||||| |||||||||| ||||| | || ||| Sbjct 21679 AAGGTCCTTCCATCTTCAAGTTGCTCTCCAGCAAATATCAATCTCTGCTGGTTTGGAGGA 21738 Query 29680 ATACCCT-CTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||||| |||||||||| | ||| ||| ||| | | | ||| || ||| || || Sbjct 21739 ATACCCTCCTTTGTCTTGGATCTTTGCTTTAACATTGTTGATAGTATCTGAACTCTCAAC 21798 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || || || || || || || ||||||||||| ||||| Sbjct 21799 CTCCAAAGTAATTGTCTTCCCTGTCAATGTCTTAACAAATATTTGCAT 21846 Score = 113 bits (124), Expect = 3e-20 Identities = 163/225 (72%), Gaps = 5/225 (2%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||| || || || || | ||| ||||| ||||| ||||| || | Sbjct 22230 ACGGAGGACAAGATGGAG-GTAGACTCGTCTTGGATGTTGTAATCAGCAATTGTTTGGCC 22288 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || ||||| |||||| | ||||| || ||||||| || ||||| || || || Sbjct 22289 ATCTTCAAGCTGTTTCCCAGCAAAGATCAACCTCCGCTGATCTGGAGGAATGCCTTCCTT 22348 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | ||| ||| | || | ||||||||| || || |||||||| | Sbjct 22349 GTCTTG-AATCTTAGCTTTTACATTATCAATAGTGTCAGAGCTCTCGACCTCAAGAGTGA 22407 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAA--CAAATATCTGCATTTTAAA 29792 | || || || | | || |||| ||||||||||||| | ||| Sbjct 22408 TGGTCTTTCCGATGAGCGTCTTAAAACAAATATCTGCATCTCAAA 22452 >seq30006 Length=21699 Score = 113 bits (124), Expect = 3e-20 Identities = 143/194 (74%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 29597 CTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATA 29656 |||| |||||||| ||||| || | || || ||| ||||| || || || || | | Sbjct 12893 CTTTCTGAATGTTGTAATCAGCTAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCGAAGA 12834 Query 29657 TCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTT 29715 |||||| ||||| ||||| |||||||| || |||||||| ||| || | ||||||| | Sbjct 12833 TCAATCGCTGCTGGTCCGGTGGAATACCTTCCTTGTCTTG-AATCTTAGCTTTGACATTG 12775 Query 29716 TCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACA 29775 || | |||||| ||| |||||||| || || || || || || | ||||| || Sbjct 12774 TCAATAGTGTCGCTTGATTCAACTTCAAGCGTGATCGTCTTCCCCGTAAGAGTTTTCACG 12715 Query 29776 AATATCTGCATTTT 29789 || ||||||||||| Sbjct 12714 AAGATCTGCATTTT 12701 >seq558 Length=67963 Score = 102 bits (112), Expect = 6e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||| | || || |||||||| || || ||||| || || || | || || Sbjct 63849 ACGAAGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCTAGCGTTCGGCC 63790 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || || ||| | ||||| || ||||| || || || || || || || Sbjct 63789 ATCCTCAAGCTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCTGGTGGGATGCCTTCCTT 63730 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | || ||| | || | ||||| || ||||| || | || | Sbjct 63729 GTCCTG-AATCTTAGCCTTAACATTGTCAATGGTGTCTGATGACTCTACCTCTAAGGTAA 63671 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 |||| ||||| |||| ||| || ||||| ||||||||||| Sbjct 63670 TAGTCTTGCCCGTTAGGGTCTTCACAAAGATCTGCATTTT 63631 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | || || ||||| || || || ||||| || || || | || || Sbjct 17103 ACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGCGTTCGGCC 17162 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || || || || | ||||||| ||||| || || ||||| || || || Sbjct 17163 ATCCTCGAGCTGCTTACCGGCGAAAATCAATCGCTGCTGGTCTGGTGGAATGCCTTCCTT 17222 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | || ||| | || | ||||| || ||||| || | || | Sbjct 17223 GTCTTG-AATCTTAGCCTTAACATTGTCAATGGTGTCTGATGACTCTACCTCTAAGGTAA 17281 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 |||| ||||| || | ||| || ||||| ||||||||||| Sbjct 17282 TAGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATTTT 17321 >seq3956 Length=148667 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | || || || | ||||| || || || |||||||| || ||||| ||| Sbjct 117756 CCTCCACAAAGACTCAAGACAAGATGAATTGTAGACTCCTTTTGAATATTGTAATCAGCA 117815 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| | | |||||| ||| |||||| |||||||| ||||| | ||| Sbjct 117816 AGTGTATGATCATCCTTAAATTGTTTTCCACCATATACTAATCTTTGTTGATCTGAGGGA 117875 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || |||||||||| ||| |||| ||| ||| | || | | || | | | || Sbjct 117876 ATTCCTTCTTTGTCTTC-AATCTTTGCTTTAACATTGTCAATGGAGTTGGTACTCTTCAC 117934 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || || ||| | | ||||||||||| || ||||| Sbjct 117935 ATCCAGAGTAATGGTCTTTCCAATGAGAGTTTTAACAAAGATTTGCAT 117982 >seq4902 Length=4857 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/225 (69%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 29561 CTCCCCTCAAACGC-AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||| || |||| | ||||| | ||| || || |||| ||| || ||| | || ||||| Sbjct 804 CTCACCACAAAGTCTAGCACTAGATGTAGAGTTGATTTTTTCTGGATGCTGTAGTCCGCC 863 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||| | ||| ||||| || || |||||| | |||| |||||||| || || || Sbjct 864 AAGGTGAGGCCATCCTCGAGCTGCTTACCAGCAAAAATCAGCCTTTGCTGGTCTGGAGGG 923 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGT--CAGAAAGTTCTA 29737 | | ||||||||||||| || || || | || | ||| | | ||| ||| | Sbjct 924 TTTTCTTCTTTGTCTTGTATCTTGGCCTTAGCATTGTCGATAGTATTGCTGAA--TTCGA 981 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCT 29782 | || ||||| || ||||| | | || ||||| || ||||||| Sbjct 982 CATCCAGAGTAATGGTTTT-ACTGGTAGAGTTTTCACGAATATCT 1025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385017368011590