Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20habrochaites_20[genbank_20GCA_5F000577655.1_202014-02-21]
42,990 sequences; 724,284,658 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq545 149 5e-31
seq3886 141 7e-29
seq796 138 9e-28
seq544 114 1e-20
seq30006 113 3e-20
seq558 102 6e-17
seq3956 98.7 8e-16
seq4902 82.4 6e-11
>seq545
Length=31085
Score = 149 bits (164), Expect = 5e-31
Identities = 168/223 (75%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | ||||| || || |||||||| ||||| ||||| |||| || ||
Sbjct 2172 ACGGAGGACAAGRTGAAGGGTAGACTCTTTTTGGATGTTGTAATCAGCAAGTGTTCGGCC 2113
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || ||||| |||||| | |||| ||| |||||||| || ||||| || || ||
Sbjct 2112 ATCTTCAAGCTGTTTCCCAGCAAAGATCAGTCTCTGCTGATCTGGAGGAATGCCTTCCTT 2053
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|||||| ||| || | ||||||| | || | ||||||||| || || |||||||| |
Sbjct 2052 GTCTTG-AATCTTAGCTTTGACATTATCAATGGTGTCAGAACTCTCGACCTCAAGAGTGA 1994
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAA 29792
| || || || || | || ||||||||||||||||| | |||
Sbjct 1993 TGGTCTTTCCGGTGAGTGTCTTAACAAATATCTGCATCTGAAA 1951
Score = 143 bits (158), Expect = 2e-29
Identities = 164/218 (75%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | ||||| || || |||||||| ||||| ||||| |||| || ||
Sbjct 2400 ACGGAGGACAAGGTGAAGGGTAGACTCTTTTTGGATGTTGTAATCAGCAAGTGTTCGGCC 2341
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || ||||| |||||| | |||| || ||||| || || |||||||| || ||
Sbjct 2340 ATCTTCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTT 2281
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|||||| |||||| | ||||||| | || | ||||| || || || ||||||||||
Sbjct 2280 GTCTTG-AATTTTAGCTTTGACATTATCGATGGTGTCTGAGCTCTCGACCTCAAGAGTTA 2222
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|||| || || || | ||||||||||| || ||||||
Sbjct 2221 TAGTCTTCCCGGTCAGAGTTTTAACAAAGATTTGCATT 2184
Score = 141 bits (156), Expect = 7e-29
Identities = 156/205 (76%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
||||| ||||| || ||||| ||||| ||||| |||| || || ||| || || |||
Sbjct 2615 TGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCATCTTCAAGCTGT 2556
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703
|| |||||| | |||| || ||||| || || |||||||| || |||||||| ||||||
Sbjct 2555 TTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCTTG-AATTTT 2497
Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762
| ||||||| | || | ||||| || || || |||||||||||||| || || ||
Sbjct 2496 AGCTTTGACATTATCGATGGTGTCTGAGCTCTCGACCTCAAGAGTTATAGTCTTCCCGGT 2437
Query 29763 TAAGGTTTTAACAAATATCTGCATT 29787
| ||||||||||| || ||||||
Sbjct 2436 CAGAGTTTTAACAAAGATTTGCATT 2412
Score = 123 bits (136), Expect = 2e-23
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| |||||||||| ||||| ||| || || || || || || ||||| || || |||
Sbjct 3551 CCTCCTCTCAAACGCAACACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGCA 3492
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | || || || ||||| |||||| | ||||| | || || || || |||
Sbjct 3491 AGAGTCCTCCCRTCCTCAAGWTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGGGGGA 3432
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|||||||| |||||||| ||| |||| ||| ||| | || | || || ||| || ||
Sbjct 3431 ATACCCTCCTTGTCTTG-AATCTTTGCTTTCACATTGTCAATGGTATCTGAACTCTCAAC 3373
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | || || || || ||||| || || || ||||| ||||||||
Sbjct 3372 CTCCAATGTGATTGTCTTCCCAGTCAAAGTCTTCACAAAGATCTGCAT 3325
Score = 122 bits (134), Expect = 7e-23
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| |||||||||| ||||| ||| || || || || || || ||||| || || |||
Sbjct 3323 CCTCCTCTCAAACGCAACACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGCA 3264
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | || || |||||||| |||||| | ||||| | || || || || |||
Sbjct 3263 AGAGTCCTCCCRTCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGGGGGA 3204
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|||||||| |||||||| ||| |||| ||| ||| | || | || || ||| || ||
Sbjct 3203 ATACCCTCCTTGTCTTG-AATCTTTGCTTTCACATTGTCAATGGTATCTGAACTCTCAAC 3145
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | || || || || ||||| || || || ||||| || |||||
Sbjct 3144 CTCCAATGTAATTGTCTTCCCAGTCAAAGTCTTGACAAAAATTTGCAT 3097
Score = 118 bits (130), Expect = 8e-22
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
|| || || |||||||| |||||||| ||||| || | || | ||| || |||||
Sbjct 3071 TGCAGGGTTGATTCTTTCTGAATGTTGTAATCTGCCAACGTCCTTCCATCCTCAAGTTGC 3012
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703
|| |||||| | |||||||| ||||| || || ||||||||||| |||||||| | |||
Sbjct 3011 TTTCCAGCAAAGATCAATCTCTGCTGGTCTGGAGGAATACCCTCCTTGTCTTGGATCTTT 2952
Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763
||| ||| | || | || || ||| || || || | ||| || || || || ||
Sbjct 2951 GCTTTAACATTGTCGATGGTATCTGAACTCTCAACCTCCAAAGTAATTGTCTTCCCTGTC 2892
Query 29764 AAGGTTTTAACAAATATCTGCAT 29786
|| || || |||||||| |||||
Sbjct 2891 AATGTCTTGACAAATATTTGCAT 2869
>seq3886
Length=20373
Score = 141 bits (156), Expect = 7e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||||||||||| | |||||||| || || || || || ||||| ||||| || |||||
Sbjct 12998 TCCTCCCCTCAGCCTAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCCGC 13057
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
| ||||| ||| ||||| || ||||||||| | ||||| || ||||| || || ||
Sbjct 13058 CAAAGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGGGG 13117
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||||||| |||||||| | || |||||| | || | ||||| || || ||
Sbjct 13118 AATACCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTCTCAAC 13177
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || ||||| || || | ||| |||||||| || |||||
Sbjct 13178 CTCCAGGGTGATGGTTTTCCCGGTAAGGGTCTTAACAAAGATTTGCAT 13225
Score = 96.9 bits (106), Expect = 3e-15
Identities = 155/223 (70%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||||||||| || ||||| || || || ||||||||||| || | || ||
Sbjct 13922 ACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAATCAGCTAGAGTCCGTCC 13981
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| || | || || || || | || | ||||||||||| || ||||| || || ||
Sbjct 13982 GTCCTCCAACTGCTTTCCGGCGAAGATAAGCCTTTGCTGATCAGGGGGAATCCCTTCCTT 14041
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || || || | || | || |||||| ||| || || || || ||
Sbjct 14042 GTCCTGGATCTTAGCCTTAACGTTGTCGATTGTATCAGAACTTTCCACCTCTAGGGTGAT 14101
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAA 29793
||| || || || | ||||| || || |||||||| | ||||
Sbjct 14102 AGTCTTTCCGGTGAGAGTTTTCACGAAGATCTGCATCTGAAAA 14144
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||||||||| || ||||| || || || ||||| || || || | ||||||
Sbjct 13694 ACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGGGTGCGGCC 13753
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || | || || || ||| | ||||| || ||||| || || ||||| || || ||
Sbjct 13754 ATCTTCCAACTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTT 13813
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|| || | || ||||| | || | ||||| || ||| || ||||| || ||
Sbjct 13814 ATCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTTTCGACCTCAAGGGTAAT 13873
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || | || || || || ||||||||
Sbjct 13874 CGTCTTACCCGTAAGAGTCTTCACGAAGATCTGCAT 13909
>seq796
Length=44438
Score = 138 bits (152), Expect = 9e-28
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| |||||||| ||||| ||||| |||||||||||||| ||||| || | ||| ||
Sbjct 18820 ACGGAGCACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCGGCGAGGGTACGGCC 18761
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || ||||| ||| | |||| || ||||| || || ||||| || || ||
Sbjct 18760 ATCTTCAAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTT 18701
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || ||| || | || | ||||| || ||| || ||||| || ||
Sbjct 18700 GTCCTGGATCTTGGCTTTAACGTTGTCAATGGTGTCTGAGCTTTCCACCTCAAGGGTGAT 18641
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || ||||| | |||||| ||||||||||||||
Sbjct 18640 GGTCTTTCCAGTGAGGGTTTTGACAAATATCTGCAT 18605
Score = 127 bits (140), Expect = 2e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||| | | || ||| | |||||| || ||||| || ||||| || ||||| ||
Sbjct 19971 CCTCCCCTGAGCCTCAACACAAGATGAAGGGTTGATTCCTTCTGAATATTGTAATCGGCT 19912
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || | || ||||||||| | ||||| |||||||| || || ||
Sbjct 19911 AATGTCCTTCCATCTTCCAACTGCTTGCCAGCAAAAATCAACCTTTGCTGGTCTGGTGGG 19852
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|||||||||||||| || ||| || | || || | || | ||||| || ||| ||
Sbjct 19851 ATACCCTCTTTGTCCTG-AATCTTGGCCTTTACGTTGTCAATGGTGTCGGAGCTTTCCAC 19793
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||||| || ||||| |||||||| ||||| || || || || ||||||
Sbjct 19792 CTCAAGGGTAATAGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCATT 19744
Score = 122 bits (134), Expect = 7e-23
Identities = 157/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || ||||| ||||| || || || || || ||||||||||| |||| ||| ||
Sbjct 19504 ACGAAGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTATAATCAGCAAGGGTCCGGCC 19445
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| || || || || || ||| | |||||||| ||||| || || ||||| || || ||
Sbjct 19444 GTCCTCAAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCTGGTGGAATGCCTTCCTT 19385
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || ||| ||| | || | |||||| || ||| || ||||| || ||
Sbjct 19384 GTCCTGGATCTTGGCTTTAACATTGTCAATAGTGTCGGAGCTTTCAACCTCAAGGGTGAT 19325
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|| || || || ||||| || ||||| || ||||||
Sbjct 19324 GGTCTTTCCGGTCAAGGTCTTCACAAAAATTTGCATT 19288
>seq544
Length=28317
Score = 114 bits (126), Expect = 1e-20
Identities = 163/228 (71%), Gaps = 1/228 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || || | ||| || || | || || || || | ||| |||||||| ||||| ||
Sbjct 21619 CCGCCTCTAAGACGAAGAACAAGGTGCAGGGTTGACTGTTTCTGAATGTTGTAATCTGCC 21678
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | ||| || ||||| | |||||| |||||||||| ||||| | || |||
Sbjct 21679 AAGGTCCTTCCATCTTCAAGTTGCTCTCCAGCAAATATCAATCTCTGCTGGTTTGGAGGA 21738
Query 29680 ATACCCT-CTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||||| |||||||||| | ||| ||| ||| | | | ||| || ||| || ||
Sbjct 21739 ATACCCTCCTTTGTCTTGGATCTTTGCTTTAACATTGTTGATAGTATCTGAACTCTCAAC 21798
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | ||| || || || || || || || ||||||||||| |||||
Sbjct 21799 CTCCAAAGTAATTGTCTTCCCTGTCAATGTCTTAACAAATATTTGCAT 21846
Score = 113 bits (124), Expect = 3e-20
Identities = 163/225 (72%), Gaps = 5/225 (2%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | ||| || || || || | ||| ||||| ||||| ||||| || |
Sbjct 22230 ACGGAGGACAAGATGGAG-GTAGACTCGTCTTGGATGTTGTAATCAGCAATTGTTTGGCC 22288
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || ||||| |||||| | ||||| || ||||||| || ||||| || || ||
Sbjct 22289 ATCTTCAAGCTGTTTCCCAGCAAAGATCAACCTCCGCTGATCTGGAGGAATGCCTTCCTT 22348
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|||||| ||| || | ||| ||| | || | ||||||||| || || |||||||| |
Sbjct 22349 GTCTTG-AATCTTAGCTTTTACATTATCAATAGTGTCAGAGCTCTCGACCTCAAGAGTGA 22407
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAA--CAAATATCTGCATTTTAAA 29792
| || || || | | || |||| ||||||||||||| | |||
Sbjct 22408 TGGTCTTTCCGATGAGCGTCTTAAAACAAATATCTGCATCTCAAA 22452
>seq30006
Length=21699
Score = 113 bits (124), Expect = 3e-20
Identities = 143/194 (74%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 29597 CTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATA 29656
|||| |||||||| ||||| || | || || ||| ||||| || || || || | |
Sbjct 12893 CTTTCTGAATGTTGTAATCAGCTAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCGAAGA 12834
Query 29657 TCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTT 29715
|||||| ||||| ||||| |||||||| || |||||||| ||| || | ||||||| |
Sbjct 12833 TCAATCGCTGCTGGTCCGGTGGAATACCTTCCTTGTCTTG-AATCTTAGCTTTGACATTG 12775
Query 29716 TCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACA 29775
|| | |||||| ||| |||||||| || || || || || || | ||||| ||
Sbjct 12774 TCAATAGTGTCGCTTGATTCAACTTCAAGCGTGATCGTCTTCCCCGTAAGAGTTTTCACG 12715
Query 29776 AATATCTGCATTTT 29789
|| |||||||||||
Sbjct 12714 AAGATCTGCATTTT 12701
>seq558
Length=67963
Score = 102 bits (112), Expect = 6e-17
Identities = 156/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||| | || || |||||||| || || ||||| || || || | || ||
Sbjct 63849 ACGAAGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCTAGCGTTCGGCC 63790
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || || || ||| | ||||| || ||||| || || || || || || ||
Sbjct 63789 ATCCTCAAGCTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCTGGTGGGATGCCTTCCTT 63730
Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| || | || ||| | || | ||||| || ||||| || | || |
Sbjct 63729 GTCCTG-AATCTTAGCCTTAACATTGTCAATGGTGTCTGATGACTCTACCTCTAAGGTAA 63671
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|||| ||||| |||| ||| || ||||| |||||||||||
Sbjct 63670 TAGTCTTGCCCGTTAGGGTCTTCACAAAGATCTGCATTTT 63631
Score = 96.9 bits (106), Expect = 3e-15
Identities = 155/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | || || ||||| || || || ||||| || || || | || ||
Sbjct 17103 ACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGCGTTCGGCC 17162
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| ||||| || || || || | ||||||| ||||| || || ||||| || || ||
Sbjct 17163 ATCCTCGAGCTGCTTACCGGCGAAAATCAATCGCTGCTGGTCTGGTGGAATGCCTTCCTT 17222
Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|||||| ||| || | || ||| | || | ||||| || ||||| || | || |
Sbjct 17223 GTCTTG-AATCTTAGCCTTAACATTGTCAATGGTGTCTGATGACTCTACCTCTAAGGTAA 17281
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|||| ||||| || | ||| || ||||| |||||||||||
Sbjct 17282 TAGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATTTT 17321
>seq3956
Length=148667
Score = 98.7 bits (108), Expect = 8e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| | | || || || | ||||| || || || |||||||| || ||||| |||
Sbjct 117756 CCTCCACAAAGACTCAAGACAAGATGAATTGTAGACTCCTTTTGAATATTGTAATCAGCA 117815
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || || ||| | | |||||| ||| |||||| |||||||| ||||| | |||
Sbjct 117816 AGTGTATGATCATCCTTAAATTGTTTTCCACCATATACTAATCTTTGTTGATCTGAGGGA 117875
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || |||||||||| ||| |||| ||| ||| | || | | || | | | ||
Sbjct 117876 ATTCCTTCTTTGTCTTC-AATCTTTGCTTTAACATTGTCAATGGAGTTGGTACTCTTCAC 117934
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || || || ||| | | ||||||||||| || |||||
Sbjct 117935 ATCCAGAGTAATGGTCTTTCCAATGAGAGTTTTAACAAAGATTTGCAT 117982
>seq4902
Length=4857
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/225 (69%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 29561 CTCCCCTCAAACGC-AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||| || |||| | ||||| | ||| || || |||| ||| || ||| | || |||||
Sbjct 804 CTCACCACAAAGTCTAGCACTAGATGTAGAGTTGATTTTTTCTGGATGCTGTAGTCCGCC 863
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||| | ||| ||||| || || |||||| | |||| |||||||| || || ||
Sbjct 864 AAGGTGAGGCCATCCTCGAGCTGCTTACCAGCAAAAATCAGCCTTTGCTGGTCTGGAGGG 923
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGT--CAGAAAGTTCTA 29737
| | ||||||||||||| || || || | || | ||| | | ||| ||| |
Sbjct 924 TTTTCTTCTTTGTCTTGTATCTTGGCCTTAGCATTGTCGATAGTATTGCTGAA--TTCGA 981
Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCT 29782
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Sbjct 982 CATCCAGAGTAATGGTTTT-ACTGGTAGAGTTTTCACGAATATCT 1025
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385017368011590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |