Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20habrochaites_20[genbank_20GCA_5F000577655.1_202014-02-21]
42,990 sequences; 724,284,658 total letters
Query= NC_023549.1
Length=56789
Score E
Sequences producing significant alignments: (Bits) Value
seq25658 89.7 2e-13
seq2458 82.4 3e-11
>seq25658
Length=33842
Score = 89.7 bits (98), Expect = 2e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169
||||||||| ||||||||||||||| | |||| ||| ||||||||| ||||||||| ||
Sbjct 17613 GTTGCGGAGACGGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTTCGAGCTACCAAA 17672
Query 50170 CTGCTCTACTCC 50181
||||||||| ||
Sbjct 17673 CTGCTCTACCCC 17684
>seq2458
Length=63974
Score = 82.4 bits (90), Expect = 3e-11
Identities = 62/74 (84%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169
||||| ||| | ||||||||||||| | |||| ||| ||||||||| | |||||||| ||
Sbjct 59789 GTTGCAGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGTGAGCTACCAAA 59848
Query 50170 CTGCTCTACTCCGC 50183
||||||||| || |
Sbjct 59849 CTGCTCTACCCCSC 59862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 181510490431380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |