Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20habrochaites_20[genbank_20GCA_5F000577655.1_202014-02-21]
42,990 sequences; 724,284,658 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq545 176 9e-39
seq796 150 4e-31
seq544 150 4e-31
seq30006 129 1e-24
seq558 127 4e-24
seq572 116 7e-21
seq3886 111 3e-19
seq3956 104 5e-17
seq31378 96.9 7e-15
seq9641 86.0 1e-11
>seq545
Length=31085
Score = 176 bits (194), Expect = 9e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| ||||| | || ||||| | |||||| || ||||||||||| || || ||||| |
Sbjct 3095 CCACCTCTAAGGCGAAGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTAATCTGCC 3036
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | || || || || ||||| |||||||||||||| | ||| || || ||||||||
Sbjct 3035 AACGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGAGGA 2976
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| ||||| ||||||||||| ||||| || || ||||| | || ||
Sbjct 2975 ATACCCTCCTTGTCTTGGATCTTTGCTTTAACATTGTCGATGGTATCTGAACTCTCAACC 2916
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || ||||| |||||||| ||||| |||||||| |||||
Sbjct 2915 TCCAAAGTAATTGTCTTCCCTGTCAATGTCTTGACAAATATTTGCAT 2869
Score = 170 bits (188), Expect = 4e-37
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|||||||||||||||| || | || ||||| || || ||||| || || || || |
Sbjct 3551 CCTCCTCTCAAACGCAACACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGCA 3492
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| | || || || || || ||||| ||||||||||| | | ||||| ||||| ||
Sbjct 3491 AGAGTCCTCCCRTCCTCAAGWTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGGGGGA 3432
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| ||||||||||||||||| ||||| ||||| ||||| | || ||
Sbjct 3431 ATACCCTCCTTGTCTTGAATCTTTGCTTTCACATTGTCAATGGTATCTGAACTCTCAACC 3372
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || ||||| || ||||| ||||| ||||| ||||||||
Sbjct 3371 TCCAATGTGATTGTCTTCCCAGTCAAAGTCTTCACAAAGATCTGCAT 3325
Score = 168 bits (186), Expect = 1e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|||||||||||||||| || | || ||||| || || ||||| || || || || |
Sbjct 3323 CCTCCTCTCAAACGCAACACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGCA 3264
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| | || || || || |||||||| ||||||||||| | | ||||| ||||| ||
Sbjct 3263 AGAGTCCTCCCRTCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGGGGGA 3204
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| ||||||||||||||||| ||||| ||||| ||||| | || ||
Sbjct 3203 ATACCCTCCTTGTCTTGAATCTTTGCTTTCACATTGTCAATGGTATCTGAACTCTCAACC 3144
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || ||||| || ||||| ||||| ||||| || |||||
Sbjct 3143 TCCAATGTAATTGTCTTCCCAGTCAAAGTCTTGACAAAAATTTGCAT 3097
Score = 167 bits (184), Expect = 5e-36
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | || || ||||| ||||| || || || ||||||| || ||| ||
Sbjct 2172 ACGGAGGACAAGRTGAAGGGTAGACTCTTTTTGGATGTTGTAATCAGCAAGTGTTCGGCC 2113
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||||| || ||||| ||||||||||| ||||| || ||||||||||| || ||||||||
Sbjct 2112 ATCTTCAAGCTGTTTCCCAGCAAAGATCAGTCTCTGCTGATCTGGAGGAATGCCTTCCTT 2053
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||||||||||| ||||| ||||| ||||| || ||| | || || || | ||| ||
Sbjct 2052 GTCTTGAATCTTAGCTTTGACATTATCAATGGTGTCAGAACTCTCGACCTCAAGAGTGAT 1993
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || | ||||| ||||||||||||||
Sbjct 1992 GGTCTTTCCGGTGAGTGTCTTAACAAATATCTGCAT 1957
Score = 158 bits (174), Expect = 2e-33
Identities = 159/204 (78%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| |||||||| |||||||| || ||||| || | || | | ||| || || || ||
Sbjct 3755 TGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGCAAGGGTGCGACCATCCTCAAGCTGC 3696
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||||||||| || || ||||||||||| || || |||||||| || || ||||||
Sbjct 3695 TTACCAGCAAAGATGAGCCTCTGTTGATCTGGTGGGATCCCTTCCTTGTCCTGTATCTTT 3636
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGT 82786
||||| ||||| ||||| |||||| || | || || ||||| || || ||||| || ||
Sbjct 3635 GCTTTCACATTGTCAATAGTATCA-GAGCTCTCCACCTCCAATGTGATTGTCTTCCCAGT 3577
Query 82787 CAACGTCTTTACAAATATCTGCAT 82810
|| ||||| ||||| ||||||||
Sbjct 3576 CAGAGTCTTCACAAAGATCTGCAT 3553
Score = 143 bits (158), Expect = 5e-29
Identities = 164/218 (75%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | ||| || ||||| ||||| || || || ||||||| || ||| ||
Sbjct 2400 ACGGAGGACAAGGTGAAGGGTAGACTCTTTTTGGATGTTGTAATCAGCAAGTGTTCGGCC 2341
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||||| || ||||| ||||||||||| || || || || ||||| || || ||||||||
Sbjct 2340 ATCTTCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTT 2281
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773
|||||||| || ||||| ||||| || || || || | || | || || || | |||||
Sbjct 2280 GTCTTGAATTTTAGCTTTGACATTATCGATGGTGTC-TGAGCTCTCGACCTCAAGAGTTA 2222
Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
| ||||| || |||| || || ||||| || ||||||
Sbjct 2221 TAGTCTTCCCGGTCAGAGTTTTAACAAAGATTTGCATT 2184
Score = 132 bits (146), Expect = 9e-26
Identities = 161/217 (74%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || || || || || || || || ||||||| || ||| ||
Sbjct 2627 CGAAGGACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCA 2568
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| || ||||| ||||||||||| || || || || ||||| || || ||||||||
Sbjct 2567 TCTTCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTG 2508
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTAT 82774
|||||||| || ||||| ||||| || || || || | || | || || || | ||||||
Sbjct 2507 TCTTGAATTTTAGCTTTGACATTATCGATGGTGTC-TGAGCTCTCGACCTCAAGAGTTAT 2449
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
||||| || |||| || || ||||| || ||||||
Sbjct 2448 AGTCTTCCCGGTCAGAGTTTTAACAAAGATTTGCATT 2412
>seq796
Length=44438
Score = 150 bits (166), Expect = 4e-31
Identities = 163/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | ||||| |||||| || || || || || || || | ||| | || ||
Sbjct 20188 ACGGAGGACAAGGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCCGCCAGAGTCCTTCC 20129
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||||| || || || || |||||||| ||||| || || || || || ||||| |||||
Sbjct 20128 ATCTTCAAGCTGCTTCCCTGCAAAGATCAGTCTCTGCTGGTCCGGTGGGATTCCCTCCTT 20069
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|| |||||||| || || ||||| ||||| |||||| | || || |||||||||||
Sbjct 20068 GTCCTGAATCTTAGCCTTCACATTGTCAATGGTATCAGAACTCTCCACCTCCAAAGTTAT 20009
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || || ||||| ||||| ||||| ||||||||
Sbjct 20008 GGTTTTCCCAGTCAAGGTCTTCACAAAAATCTGCAT 19973
Score = 118 bits (130), Expect = 2e-21
Identities = 158/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || ||||| ||||| || ||||| || || || ||||| | || | | ||
Sbjct 18820 ACGGAGCACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCGGCGAGGGTACGGCC 18761
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||||| || || || || |||||||| || || || || ||||| || || ||||||||
Sbjct 18760 ATCTTCAAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTT 18701
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTT-CTACTTCCAAAGTTA 82773
|| || ||||| ||||| || || ||||| || || | || || | || || | || |
Sbjct 18700 GTCCTGGATCTTGGCTTTAACGTTGTCAATGGTGTC-TGAGCTTTCCACCTCAAGGGTGA 18642
Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| ||||| || || | || || ||||||||||||||
Sbjct 18641 TGGTCTTTCCAGTGAGGGTTTTGACAAATATCTGCAT 18605
>seq544
Length=28317
Score = 150 bits (166), Expect = 4e-31
Identities = 171/228 (75%), Gaps = 1/228 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| ||||| | ||| ||||| | |||||| || || | |||||| || || ||||| |
Sbjct 21619 CCGCCTCTAAGACGAAGAACAAGGTGCAGGGTTGACTGTTTCTGAATGTTGTAATCTGCC 21678
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | || || ||||| ||||| | ||||||||| || | ||| || || | ||||||
Sbjct 21679 AAGGTCCTTCCATCTTCAAGTTGCTCTCCAGCAAATATCAATCTCTGCTGGTTTGGAGGA 21738
Query 82704 ATTCCTTCCTTA-TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| || ||||| ||||| ||||||||||| ||||| | || ||||| | || ||
Sbjct 21739 ATACCCTCCTTTGTCTTGGATCTTTGCTTTAACATTGTTGATAGTATCTGAACTCTCAAC 21798
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || ||||| |||||||| ||||| |||||||| |||||
Sbjct 21799 CTCCAAAGTAATTGTCTTCCCTGTCAATGTCTTAACAAATATTTGCAT 21846
Score = 125 bits (138), Expect = 1e-23
Identities = 150/200 (75%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 82614 GTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCA 82673
||||| || | || || || ||||||| | || || ||||| || ||||| |||
Sbjct 22248 GTAGACTCGTCTTGGATGTTGTAATCAGCAATTGTTTGGCCATCTTCAAGCTGTTTCCCA 22307
Query 82674 GCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTT 82733
|||||||| | || | ||||||||||| || |||||||| ||||||||||| ||||||
Sbjct 22308 GCAAAGATCAACCTCCGCTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTAGCTTTT 22367
Query 82734 ACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGT 82792
||||| ||||| || ||| || | || || || | ||| || ||||| || | | |||
Sbjct 22368 ACATTATCAATAGTGTCA-GAGCTCTCGACCTCAAGAGTGATGGTCTTTCCGATGAGCGT 22426
Query 82793 CTT--TACAAATATCTGCAT 82810
||| ||||||||||||||
Sbjct 22427 CTTAAAACAAATATCTGCAT 22446
Score = 114 bits (126), Expect = 3e-20
Identities = 150/204 (74%), Gaps = 4/204 (2%)
Strand=Plus/Plus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| |||||||| ||||| || |||| || || | || | | ||| || || || ||
Sbjct 21175 TGAAGAGTAGACTCTTTGTGGCTATTGTAGTCTGCAAGGGTGCGACCATCCTCAAGCTGC 21234
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||||||||| || || |||||||||| || || | |||||| || || ||| ||
Sbjct 21235 TTACCAGCAAAGATAAGCCTCCGTTGATCTGGTGGAATCCTTTCCTTGTCCTGTATCCTT 21294
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGT 82786
||||| ||| ||| | ||||| | || | | || ||||| || || ||||| || ||
Sbjct 21295 GCTTTCACA--GTCAGTAGTATC-TGAGCTCTTAACCTCCAATGTGATTGTCTTCCCAGT 21351
Query 82787 CAACGTCTTTACAAATATCTGCAT 82810
|| ||||| ||||| ||||||||
Sbjct 21352 CAGAGTCTTCACAAAGATCTGCAT 21375
Score = 113 bits (124), Expect = 9e-20
Identities = 162/227 (71%), Gaps = 1/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| | | ||||| | || | ||| || ||||||| ||||| || ||||
Sbjct 21848 CCACCCCTCAGATGAAGAACAAGATGTAAAGTGGACTCTTTCTAAATATTGTAGTCAGCC 21907
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | || || || || ||||| || || | |||||| ||||| | || ||| ||||
Sbjct 21908 AGGGTCCTTCCATCCTCAAGTTGCTTGCCGG-AAAGATCAGTCTCTTCTGGTCTAGAGGA 21966
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||||||||| ||||| || || || || || ||||| |||| | ||| |||
Sbjct 21967 ATCCCTTCCTTATCCTGAATTTTGGCCTTCACGTTGTCAATTATATCTGAACTTTCAACT 22026
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||| || || | |||| ||||| ||||||||
Sbjct 22027 TCAAGGGTGATGGTCTTTCCAGTAAGTATCTTGACAAAGATCTGCAT 22073
>seq30006
Length=21699
Score = 129 bits (142), Expect = 1e-24
Identities = 143/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680
||||||| || || ||||||| |||| | | || ||||| || || ||||| || ||||
Sbjct 12893 CTTTCTGAATGTTGTAATCAGCTAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCGAAGA 12834
Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740
| | || || || || || || || |||||||| ||||||||||| ||||| ||||| |
Sbjct 12833 TCAATCGCTGCTGGTCCGGTGGAATACCTTCCTTGTCTTGAATCTTAGCTTTGACATTGT 12774
Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800
|||| || || | | ||| ||||| | || |||||||| || || | || || || |
Sbjct 12773 CAATAGTGTCGCTTGATTCAACTTCAAGCGTGATCGTCTTCCCCGTAAGAGTTTTCACGA 12714
Query 82801 ATATCTGCATT 82811
| |||||||||
Sbjct 12713 AGATCTGCATT 12703
>seq558
Length=67963
Score = 127 bits (140), Expect = 4e-24
Identities = 160/220 (73%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | ||| || || || || ||||| || || || |||| ||| ||| ||
Sbjct 17103 ACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGCGTTCGGCC 17162
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || || || || || || || || | || || || ||||| || || ||||||||
Sbjct 17163 ATCCTCGAGCTGCTTACCGGCGAAAATCAATCGCTGCTGGTCTGGTGGAATGCCTTCCTT 17222
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||||||||||| || || ||||| ||||| || || | ||||| || || || ||
Sbjct 17223 GTCTTGAATCTTAGCCTTAACATTGTCAATGGTGTCTGATGACTCTACCTCTAAGGTAAT 17282
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814
|||||||| |||| ||||| ||||| ||||||||| ||
Sbjct 17283 AGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATTTTT 17322
>seq572
Length=122185
Score = 116 bits (128), Expect = 7e-21
Identities = 108/137 (79%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| || | | |||||| | ||| ||||| ||||||||||| || || |||||||
Sbjct 87946 CCTCCCCTGAGCCTCAGAACAAGGTGAAGAGTTGATTCTTTCTGAATGTTGTAATCAGCG 88005
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| |||| || ||||| | |||||||||||||| || ||||| || ||||| ||||||
Sbjct 88006 AGGGTTCTCCCATCTTCCAACTGTTTTCCAGCAAAAATCAGTCTCTGCTGATCAGGAGGT 88065
Query 82704 ATTCCTTCCTTATCTTG 82720
|| ||||| ||||| ||
Sbjct 88066 ATGCCTTCTTTATCCTG 88082
>seq3886
Length=20373
Score = 111 bits (122), Expect = 3e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || || || || || || || ||||| || || || ||||
Sbjct 13681 TACCACCACGGAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 13740
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||| | | || ||||| | || ||||| |||||||| | || || || ||||| |
Sbjct 13741 CTAGGGTGCGGCCATCTTCCAACTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCTGGGG 13800
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAG-GTTCT 82760
| || ||||||||||| || ||||| || || || || ||||| || || | || |||
Sbjct 13801 GAATGCCTTCCTTATCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTC-TGAGCTTTCG 13859
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || | || |||||||| || || | ||||| || || ||||||||
Sbjct 13860 ACCTCAAGGGTAATCGTCTTACCCGTAAGAGTCTTCACGAAGATCTGCAT 13909
Score = 107 bits (118), Expect = 4e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || | || || ||||| || ||||| || || || ||||
Sbjct 13453 TACCACCACGGAGACGGAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAG 13512
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
|| | | || || || || || || ||||| ||||| | || || || ||||| |
Sbjct 13513 CTAAGGTGCGGCCATCCTCGAGCTGCTTCCCAGCGAAGATCAACCTCTGCTGGTCTGGGG 13572
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||||||||| || ||||| || || || || ||||| || || ||| |
Sbjct 13573 GGATCCCTTCCTTATCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTTTCCA 13632
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||||||| || ||||| || || | ||||| || || ||||||||
Sbjct 13633 CCTCCAAAGTGATGGTCTTTCCGGTAAGAGTCTTAACGAAGATCTGCAT 13681
>seq3956
Length=148667
Score = 104 bits (114), Expect = 5e-17
Identities = 144/201 (72%), Gaps = 8/201 (4%)
Strand=Plus/Plus
Query 82614 GTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCA 82673
||||| || || || ||||| ||||||| || | | | || | | ||||||||||
Sbjct 117786 GTAGACTCCTTTTGAATATTGTAATCAGCAAGTGTATGATCATCCTTAAATTGTTTTCCA 117845
Query 82674 GCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTT 82733
|| | | || |||||||||||||| || |||||||| || |||| ||||||||||||
Sbjct 117846 CCATATACTAATCTTTGTTGATCTGAGGGAATTCCTTCTTTGTCTTCAATCTTTGCTTTA 117905
Query 82734 ACATTTTCAATCGTATCATTAGGTTCT----ACTTCCAAAGTTATCGTCTTGCCTGTCAA 82789
||||| ||||| | | | ||| || || |||| ||| || ||||| || | |
Sbjct 117906 ACATTGTCAATGG----AGTTGGTACTCTTCACATCCAGAGTAATGGTCTTTCCAATGAG 117961
Query 82790 CGTCTTTACAAATATCTGCAT 82810
|| || ||||| || |||||
Sbjct 117962 AGTTTTAACAAAGATTTGCAT 117982
>seq31378
Length=18529
Score = 96.9 bits (106), Expect = 7e-15
Identities = 152/215 (71%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 82605 AAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTA-- 82662
|| |||| ||| | |||||||| || ||||| |||| ||| | | | | | |||||
Sbjct 7618 AAATGCAAAGTCAACTCTTTCTGGATGTTATAGTCAGCAAGAGTGCGATCATTTTCTACC 7677
Query 82663 --GTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTG 82720
| | || |||||||| || | ||||||| | ||||| ||||||||||| |||||
Sbjct 7678 TAGCTTCTTACCAGCAAAAATCAAAATTTGTTGGTGGGGAGGAATTCCTTCCTTGTCTTG 7737
Query 82721 AATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTT 82780
|||||| | || ||||| | ||| ||| || | | ||| || | | ||||| || ||
Sbjct 7738 AATCTTGACCTTGACATTGTAAATAGTAGCACTGGATTCAACCTGTAGGGTTAT-GTTTT 7796
Query 82781 GCCTGTCAACGTCTTT-ACAAATATCTGCATTATT 82814
|| |||| || ||| || | ||||||||| ||
Sbjct 7797 ACCCATCAAAGTTTTTCACGGAGATCTGCATTTTT 7831
>seq9641
Length=27822
Score = 86.0 bits (94), Expect = 1e-11
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766
|||||||| || || ||||| ||||| ||||| || || ||||| | | ||| ||||||
Sbjct 27343 CCTTCCTTGTCCTGTATCTTAGCTTTAACATTATCGATGGTATCGCTGGATTCAACTTCC 27402
Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
| |||||||| || || |||| || || || ||||||||||||
Sbjct 27403 AGCGTTATCGTTTTACCGGTCAGAGTTTTCACGAATATCTGCATT 27447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981286400373610
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |