Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20habrochaites_20[genbank_20GCA_5F000577655.1_202014-02-21]
42,990 sequences; 724,284,658 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq3886 141 2e-28
seq796 141 2e-28
seq545 129 1e-24
seq544 109 1e-18
seq30006 100 7e-16
seq572 96.9 8e-15
seq16835 93.3 1e-13
seq558 84.2 5e-11
>seq3886
Length=20373
Score = 141 bits (156), Expect = 2e-28
Identities = 144/188 (77%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| ||||| ||||| || ||||| | || |||||||||||||| ||| ||||
Sbjct 14122 AAAACTCTCACCGGAAAGACTATCACCCTAGAGGTGGAAAGTTCTGATACAATCGACAAC 14063
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || ||||| ||| || || ||||| |||||||||
Sbjct 14062 GTTAAGGCTAAGATCCAGGACAAGGAAGGGATTCCCCCTGATCAGCAAAGGCTTATCTTC 14003
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||||||||||||||| || ||| ||||| | || ||||| ||| ||||||| |||||
Sbjct 14002 GCCGGAAAGCAGTTGGAGGACGGACGGACTCTAGCTGATTATAACATCCAGAAGGAGTCC 13943
Query 206365 ACTCTTCA 206372
|| || ||
Sbjct 13942 ACCCTCCA 13935
Score = 120 bits (132), Expect = 7e-22
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || ||||| ||||| || ||||||||||| |||||||| || |||
Sbjct 13450 CAGATTTTTGTGAAGACCCTCACCGGAAAGACCATCACTTTGGAGGTGGAAAGCTCCGAC 13391
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| || || || || |||||| || ||| ||
Sbjct 13390 ACCATTGATAATGTTAAGGCTAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCAGCAG 13331
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | |||||||| || |||||| | || || || | || | ||||| |||||| ||
Sbjct 13330 AGGTTGATCTTCGCTGGTAAGCAGCTCGAGGACGGCCGCACCCTTGCCGACTACAACATC 13271
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || |||||||||||
Sbjct 13270 CAGAAGGAGTCGACCCTTCACCTTGT 13245
Score = 107 bits (118), Expect = 5e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || ||||| || ||||||||||| |||||||| || ||||| | ||
Sbjct 13666 AAGACTCTTACCGGAAAGACCATCACTTTGGAGGTGGAAAGCTCCGACACCATTGACAAC 13607
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || ||||| || || ||| || || | ||||||
Sbjct 13606 GTGAAGGCTAAGATCCAGGATAAGGAAGGGATCCCCCCAGACCAGCAGAGGTTGATCTTC 13547
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| | || ||||| | || || || || |||||| ||||||| ||||||
Sbjct 13546 GCTGGGAAGCAGCTCGAGGATGGCCGCACCTTAGCTGACTACAACATCCAGAAGGAGTCT 13487
Query 206365 ACTCTTCACCTTGT 206378
|| || || |||||
Sbjct 13486 ACCCTCCATCTTGT 13473
Score = 105 bits (116), Expect = 2e-17
Identities = 149/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | || || || || ||||||||||| ||||| |||||||||
Sbjct 12994 CAGATCTTTGTGAAGACCTTGACCGGGAAGACCATCACTTTGGAGGTGGAGAGTTCTGAC 12935
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| |||| || ||||| |||||||| || || || || || || ||| ||
Sbjct 12934 ACCATCGACAATGTGAAAGC-TAAGATTCAGGACAAGGAGGGGATCCCACCAGACCAGCA 12876
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|| | |||||||| || |||||| | || ||||| | || | || || ||||| |
Sbjct 12875 GAGGTTGATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTTGCTGACTACAATAT 12816
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378
|||||| |||||||| || ||||||||
Sbjct 12815 CCAGAAGGAGTCTACCCTGCACCTTGT 12789
Score = 89.7 bits (98), Expect = 1e-12
Identities = 72/87 (83%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 204770 TGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 204829
|| || || ||||| ||||||| ||||| ||||| | ||||| ||| || |||| ||||
Sbjct 13935 TGGAGGGTGGACTCCTTCTGGATGTTATAATCAGCTAGAGTCCGTCCGTCCTCCAACTGC 13994
Query 204830 TTTCCGGCGAAGATAAGCCGTTGTTGA 204856
||||||||||||||||||| ||| |||
Sbjct 13995 TTTCCGGCGAAGATAAGCCTTTGCTGA 14021
Score = 87.8 bits (96), Expect = 4e-12
Identities = 132/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || ||||| || | || || ||||| || ||||| | ||
Sbjct 13894 AAGACTCTTACGGGTAAGACGATTACCCTTGAGGTCGAAAGCTCAGACACCATTGACAAC 13835
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || ||||| ||| || ||| || || | |||||
Sbjct 13834 GTCAAGGCTAAGATCCAGGATAAGGAAGGCATTCCCCCAGACCAGCAGAGGTTGATCTTT 13775
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| |||||||||||||||||||| | || | || || |||||| ||||||| |||||
Sbjct 13774 GCAGGAAAGCAGTTGGAAGATGGCCGCACCCTAGCTGACTACAACATCCAGAAGGAGTCC 13715
Query 206365 ACTCTTCA 206372
|| || ||
Sbjct 13714 ACCCTCCA 13707
>seq796
Length=44438
Score = 141 bits (156), Expect = 2e-28
Identities = 150/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || ||||| | || ||||||||||||||||| | || || |||
Sbjct 19541 ACTGGCAAGACAATCACCCTTGAGGTGGAAAGTTCTGACACCATTGACAATGTTAAGGCC 19600
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
|| ||||| || |||||||| ||| || ||| || || | ||||| |||||||||
Sbjct 19601 AAAATTCAGGACAAAGAAGGTATTCCACCAGACCAGCAGAGGTTGATCTTTGCCGGAAAG 19660
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|||||||||||||||||||| || |||||||||||| ||||||| ||||| || ||||||
Sbjct 19661 CAGTTGGAAGATGGAAGGACATTAGCCGATTACAACATCCAGAAGGAGTCAACCCTTCAC 19720
Query 206374 CTTGTTTTGAGACTTCGA 206391
| || || | || |||
Sbjct 19721 TTGGTCCTGCGTCTCCGA 19738
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | || || ||||| || |||||||| ||||| ||||||||
Sbjct 19976 CAGATTTTTGTGAAGACCTTGACTGGGAAAACCATAACTTTGGAGGTGGAGAGTTCTGAT 20035
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| |||||||| || || || ||||| |||||| ||
Sbjct 20036 ACCATTGACAATGTGAAGGCTAAGATTCAGGACAAGGAGGGAATCCCACCGGACCAGCAG 20095
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||||| ||||| || || |||||| | ||||||||||||||| |||| || |||||| ||
Sbjct 20096 AGACTGATCTTTGCAGGGAAGCAGCTTGAAGATGGAAGGACTCTGGCGGACTACAACATC 20155
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
|| || ||||||||| | ||||||||
Sbjct 20156 CAAAAGGAGTCTACTTTGCACCTTGT 20181
Score = 127 bits (140), Expect = 5e-24
Identities = 151/202 (75%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||||||| |||||| ||||| ||||| || ||||| | || |||||||| || |||
Sbjct 18608 CAGATATTTGTCAAAACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAAAGCTCAGAC 18667
Query 206233 ACAGTCGA-ATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | || | | |||||| || ||| || || || ||||| ||| || ||| ||
Sbjct 18668 ACCATTGACAACGTTAAAGCCAA-GATCCAGGACAAGGAAGGCATTCCCCCAGACCAGCA 18726
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|| || ||||| || || |||||| | |||||||| | || | |||||||||||| |
Sbjct 18727 GAGGCTGATCTTTGCGGGCAAGCAGCTTGAAGATGGCCGTACCCTCGCCGATTACAACAT 18786
Query 206352 CCAGAAAGAGTCTACTCTTCAC 206373
|| |||||||| |||||||||
Sbjct 18787 TCAAAAAGAGTCCACTCTTCAC 18808
Score = 116 bits (128), Expect = 9e-21
Identities = 142/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || || || | || |||||||| || ||||| | || ||||||
Sbjct 19769 ACTGGCAAGACTATTACCCTTGAGGTGGAAAGCTCCGACACCATTGACAACGTAAAGGCC 19828
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
|||||||| || ||||| || || || ||| ||||| | || || || || |||
Sbjct 19829 AAGATTCAGGACAAAGAGGGTATCCCACCAGACCAGCAAAGGTTGATTTTTGCTGGCAAG 19888
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|||||||||||||||||||| || ||||||||||| | ||||| || || || |||||
Sbjct 19889 CAGTTGGAAGATGGAAGGACATTAGCCGATTACAATATTCAGAAGGAATCAACCCTTCAT 19948
Query 206374 CTTGTTTTGAGACT 206387
||||| ||||| ||
Sbjct 19949 CTTGTGTTGAGGCT 19962
Score = 93.3 bits (102), Expect = 1e-13
Identities = 130/181 (72%), Gaps = 2/181 (1%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252
|| ||||| || ||||| | || || ||||| || ||||| | || || |||||
Sbjct 19085 ACCGGAAAGACCATCACCCTTGAGGTTGAAAGCTCCGACACTATTGACAATGTTAAAGCC 19144
Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312
|| ||| || || || ||||| ||| || ||| || ||| | ||||| ||||||||
Sbjct 19145 AA-GATCCAGGACAAGGAAGGCATTCCCCCAGACCAGCAGAGATTGATCTTTGCCGGAAA 19203
Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372
|||| | || || || ||||| | || ||||||||| |||| || || || || |||||
Sbjct 19204 GCAGCTTGAGGACGGCAGGACCCTTGCTGATTACAACATCCARAAGGAATCAACYCTTCA 19263
Query 206373 C 206373
|
Sbjct 19264 C 19264
Score = 89.7 bits (98), Expect = 1e-12
Identities = 130/181 (72%), Gaps = 2/181 (1%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252
|| ||||| || ||||| | || || ||||| || ||||| | || || |||||
Sbjct 19313 ACCGGAAAGACCATCACCCTTGAGGTTGAAAGCTCCGACACTATTGACAATGTTAAAGCC 19372
Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312
|| ||| || || || ||||| ||| || ||| || ||| | ||||| ||||||||
Sbjct 19373 AA-GATCCAGGACAAGGAAGGCATTCCACCAGACCAGCAGAGATTGATCTTTGCCGGAAA 19431
Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372
|||| | || || || |||| | || ||||| ||| ||||||| ||||| || |||||
Sbjct 19432 GCAGCTTGAGGACGGCCGGACCCTTGCTGATTATAACATCCAGAAGGAGTCAACCCTTCA 19491
Query 206373 C 206373
|
Sbjct 19492 C 19492
Score = 87.8 bits (96), Expect = 4e-12
Identities = 69/83 (83%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823
|||||||| | ||||||||| || |||| || ||||| |||| |||||||||||||||
Sbjct 20181 ACAAGGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCCGCCAGAGTCCTTCCATCTTCA 20122
Query 204824 AGCTGCTTTCCGGCGAAGATAAG 204846
|||||||| || || ||||| ||
Sbjct 20121 AGCTGCTTCCCTGCAAAGATCAG 20099
>seq545
Length=31085
Score = 129 bits (142), Expect = 1e-24
Identities = 154/207 (74%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||||||| || || ||||| ||||| || |||||| | || || || |||||||||
Sbjct 1960 CAGATATTTGTTAAGACACTCACCGGAAAGACCATCACTCTTGAGGTCGAGAGTTCTGAC 2019
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | || || ||||| ||||||||||| || ||||| ||| || || ||
Sbjct 2020 ACCATTGATAATGTCAAAGC-TAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAGCA 2078
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
||||| ||||| || || || ||| | |||||||| | || | || ||||||||| |
Sbjct 2079 GAGACTGATCTTTGCTGGGAAACAGCTTGAAGATGGCCGAACACTTGCTGATTACAACAT 2138
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378
||| ||||||||||| ||||| |||||
Sbjct 2139 CCAAAAAGAGTCTACCCTTCAYCTTGT 2165
Score = 129 bits (142), Expect = 1e-24
Identities = 155/208 (75%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| |||||| ||| || | ||||| || || || |||||||| || || ||||| ||
Sbjct 2872 CAAATATTTGTCAAGACATTGACAGGGAAGACAATTACTTTGGAGGTTGAGAGTTCAGAT 2931
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| |||| || |||||||| ||| ||||| || || || ||| || ||| ||
Sbjct 2932 ACCATCGACAATGTTAAAGCAAA-GATCCAAGACAAGGAGGGTATTCCTCCAGACCAGCA 2990
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
||| | ||||| || |||||||| | || ||||||||||| ||||| ||||||||| |
Sbjct 2991 GAGATTGATCTTTGCTGGAAAGCAACTTGAGGATGGAAGGACGTTGGCAGATTACAACAT 3050
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTT 206379
|||||||| || || || |||||||||
Sbjct 3051 TCAGAAAGAATCAACCCTGCACCTTGTT 3078
Score = 118 bits (130), Expect = 3e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || || || ||||| || ||||| | ||||| |||||||| ||
Sbjct 2644 CAGATCTTTGTCAAGACACTTACTGGAAAGACCATCACCCTTGAAGTTGAAAGTTCCGAT 2703
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| || ||||| || || ||||| ||| || ||| ||
Sbjct 2704 ACCATTGACAACGTGAAGGCCAAAATTCAGGACAAGGAAGGGATTCCTCCAGACCAGCAG 2763
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||||| ||||| ||||| ||||| | || ||||||||||| |||| || ||||| |
Sbjct 2764 AGACTGATCTTTGCCGGCAAGCAACTTGAGGATGGAAGGACCCTGGCTGACTACAATATT 2823
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387
|||||||||||||| | || |||||| | ||||
Sbjct 2824 CAGAAAGAGTCTACCTTACATCTTGTTCTTCGACT 2858
Score = 111 bits (122), Expect = 4e-19
Identities = 143/195 (73%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || || || || ||| | || || || || || ||||| ||||
Sbjct 2200 AAAACTCTGACCGGGAAGACTATAACTCTTGAGGTCGAGAGCTCAGACACCATCGATAAT 2259
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||||| ||| |||||||| || ||||| ||| || ||| || || || |||||
Sbjct 2260 GTCAAAGCTAAA-ATTCAAGACAAGGAAGGTATTCCCCCAGACCAGCAGAGGCTGATCTT 2318
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| || || ||| | |||||||| | || | || ||||||||| |||| ||||||||
Sbjct 2319 TGCTGGGAAACAGCTTGAAGATGGCCGAACACTTGCTGATTACAACATCCAAAAAGAGTC 2378
Query 206364 TACTCTTCACCTTGT 206378
||| |||||||||||
Sbjct 2379 TACCCTTCACCTTGT 2393
Score = 104 bits (114), Expect = 6e-17
Identities = 156/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || || || || || || ||||| ||||| ||||| || |||||
Sbjct 3556 CAGATCTTTGTGAAGACTCTGACTGGGAAGACAATCACATTGGAGGTGGAGAGCTCTGAT 3615
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | || || |||||||| ||| || || || ||||| || || || ||
Sbjct 3616 ACTATTGACAATGTGAAAGCAAA-GATACAGGACAAGGAAGGGATCCCACCAGATCAACA 3674
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|| || ||||| || || |||||| | || ||||| | || | || || || ||| |
Sbjct 3675 GAGGCTCATCTTTGCTGGTAAGCAGCTTGAGGATGGTCGCACCCTTGCAGACTATAACAT 3734
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
||||||||||||||||||||| ||||| |||| || ||
Sbjct 3735 CCAGAAAGAGTCTACTCTTCATCTTGTCCTGAGGCTCCG 3773
Score = 102 bits (112), Expect = 2e-16
Identities = 141/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || || || || ||| | || || || || || ||||| ||||
Sbjct 2428 AAAACTCTGACCGGGAAGACTATAACTCTTGAGGTCGAGAGCTCAGACACCATCGATAAT 2487
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||||| ||| |||||||| || ||||| ||| || ||| || || || |||||
Sbjct 2488 GTCAAAGCTAAA-ATTCAAGACAAGGAAGGTATTCCCCCAGACCAGCAGAGGCTGATCTT 2546
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| || || ||| | |||||||| | || | || ||||||||| |||| || |||||
Sbjct 2547 TGCTGGGAAACAGCTTGAAGATGGCCGAACACTTGCTGATTACAACATCCAAAAGGAGTC 2606
Query 206364 TACTCTTCACCTTGT 206378
|| |||||||||||
Sbjct 2607 CACCCTTCACCTTGT 2621
Score = 91.5 bits (100), Expect = 3e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
|| || |||| ||||| |||||||||||||||||||||| |||||||| || | ||
Sbjct 3773 CGGAGCCTCAGGACAAGATGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGCAAGGGTG 3714
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
| ||||| || |||||||| || || ||||| |||| ||||||
Sbjct 3713 CGACCATCCTCAAGCTGCTTACCAGCAAAGATGAGCCTCTGTTGA 3669
Score = 87.8 bits (96), Expect = 4e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | || || || || ||||| ||||| || || ||||| ||
Sbjct 3328 CAGATCTTTGTGAAGACTTTGACTGGGAAGACAATCACATTGGAGGTTGAGAGTTCAGAT 3387
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | || || |||||||| ||||||||| || || || ||| || ||| ||
Sbjct 3388 ACCATTGACAATGTGAAAGCAAA-GATTCAAGACAAGGAGGGTATTCCCCCAGACCAACA 3446
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
| | ||||| || || || || | || || || |||||| | || || |||||| |
Sbjct 3447 GCGTTTGATCTTTGCTGGTAAACAWCTTGAGGAYGGGAGGACTCTTGCAGACTACAACAT 3506
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTG 206382
|||||| ||||| ||||| || || || |||
Sbjct 3507 CCAGAAGGAGTCAACTCTCCATCTGGTGTTG 3537
Score = 86.0 bits (94), Expect = 1e-11
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814
|||| | |||||| || | |||||||||||||| | ||| |||||||||| ||||||
Sbjct 2858 AGTCGAAGAACAAGATGTAAGGTAGACTCTTTCTGAATATTGTAGTCAGCCAGGGTCCTT 2799
Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846
||||| || || ||||| ||||| ||||| ||
Sbjct 2798 CCATCCTCAAGTTGCTTGCCGGCAAAGATCAG 2767
>seq544
Length=28317
Score = 109 bits (120), Expect = 1e-18
Identities = 152/209 (73%), Gaps = 3/209 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| |||||| || || | ||||| || || || |||||||| || || ||||| ||
Sbjct 21843 CAAATATTTGTTAAGACATTGACAGGGAAGACAATTACTTTGGAGGTTGAGAGTTCAGAT 21784
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGA-ATTTTGCCGGACGCTC 206290
|| || | || |||||||| ||| ||||| |||| ||| ||| || || |
Sbjct 21783 ACTATCAACAATGTTAAAGCAAA-GATCCAAGACAAAGGAGGGTATTCCTCCAAACCAGC 21725
Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350
| ||| | || || || ||| |||| | |||||||||||||| ||||| |||||||||
Sbjct 21724 AGAGATTGATATTTGCTGGAGAGCAACTTGAAGATGGAAGGACCTTGGCAGATTACAACA 21665
Query 206351 TCCAGAAAGAGTCTACTCTTCACCTTGTT 206379
| |||||| |||| || || |||||||||
Sbjct 21664 TTCAGAAACAGTCAACCCTGCACCTTGTT 21636
Score = 91.5 bits (100), Expect = 3e-13
Identities = 145/207 (70%), Gaps = 1/207 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| | || || ||||| || ||||| | ||||| |||||||| ||
Sbjct 22070 CAGATCTTTGTCAAGATACTTACTGGAAAGACCATCACCCTTGAAGTTGAAAGTTCAGAT 22011
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
| | | || || ||| || ||||| || || ||||| ||| | ||| |
Sbjct 22010 ATAATTGACAACGTGAAGGCCAAAATTCAGGATAAGGAAGGGATTCCTCTAGACCAGAAG 21951
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||||| ||||| |||| ||||| | || ||||||||||| |||| || ||||| |
Sbjct 21950 AGACTGATCTTT-CCGGCAAGCAACTTGAGGATGGAAGGACCCTGGCTGACTACAATATT 21892
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379
|||||||||| ||| | || ||||||
Sbjct 21891 TAGAAAGAGTCCACTTTACATCTTGTT 21865
Score = 86.0 bits (94), Expect = 1e-11
Identities = 145/208 (70%), Gaps = 3/208 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTT--TGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTG 206230
||||||||| | || ||||||| ||||| || |||||| | || || || || ||||
Sbjct 22443 CAGATATTTGTTTTAAGACGCTCATCGGAAAGACCATCACTCTTGAGGTCGAGAGCTCTG 22384
Query 206231 ACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTC 206290
|||| | || ||||| ||||||||||| || ||||| ||| || || |
Sbjct 22383 ACACTATTGATAATGTAAAAGCTAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAGC 22324
Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350
|| | ||||| || || || ||| | |||||||| || | || |||||||||
Sbjct 22323 GGAGGTTGATCTTTGCTGGGAAACAGCTTGAAGATGGCCAAACAATTGCTGATTACAACA 22264
Query 206351 TCCAGAAAGAGTCTACTCTTCACCTTGT 206378
|||| | |||||||| || || |||||
Sbjct 22263 TCCAAGACGAGTCTAC-CTCCATCTTGT 22237
>seq30006
Length=21699
Score = 100 bits (110), Expect = 7e-16
Identities = 144/200 (72%), Gaps = 5/200 (3%)
Strand=Plus/Plus
Query 206161 GCTAAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTG 206220
|| |||||| ||||| || ||||| || || || || |||||||| | |||||
Sbjct 12698 GCCAAAATG---CAGATCTTCGTGAAAACTCTTACGGGGAAGACGATCACGCTTGAAGTT 12754
Query 206221 GAAAGTTCTGACACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTT 206279
||| ||||| | || || ||||| || ||||||||| || ||||| |||
Sbjct 12755 GAATCAAGCGACACTATTGACAATGTCAAAGCTAA-GATTCAAGACAAGGAAGGTATTCC 12813
Query 206280 GCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGC 206339
|||||| || || | |||||||||||||||||| | ||||||||| | ||| | ||
Sbjct 12814 ACCGGACCAGCAGCGATTGATCTTCGCCGGAAAGCAGCTCGAAGATGGACGTACTCTAGC 12873
Query 206340 CGATTACAACGTCCAGAAAG 206359
||||||||| | |||||||
Sbjct 12874 TGATTACAACATTCAGAAAG 12893
>seq572
Length=122185
Score = 96.9 bits (106), Expect = 8e-15
Identities = 80/98 (82%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349
|| ||||| || || || ||||| |||||||||||||| || || | || |||||||||
Sbjct 88052 CAGAGACTGATTTTTGCTGGAAAACAGTTGGAAGATGGGAGAACCCTCGCTGATTACAAC 87993
Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387
| |||||||| || ||||||||||||||| |||| ||
Sbjct 87992 ATTCAGAAAGAATCAACTCTTCACCTTGTTCTGAGGCT 87955
>seq16835
Length=8075
Score = 93.3 bits (102), Expect = 1e-13
Identities = 139/195 (71%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || || |||||||| | || || || ||| ||||| ||||
Sbjct 7086 AAAACCCTAACGGGGAAGACGATCACCCTAGAGGTTGAGTCTTCCGACACCATCGACAAT 7027
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||||| || ||| || || || ||||| ||| || ||| || | | || ||
Sbjct 7026 GTCAAAGCCAA-GATCCAGGACAAGGAAGGGATTCCCCCAGACCAGCAGCGTTTGATTTT 6968
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||||||||||||| | || ||||| | ||| | ||||| |||||| ||||||| |||||
Sbjct 6967 CGCCGGAAAGCAGCTTGAGGATGGTCGTACTCTTGCCGACTACAACATCCAGAAGGAGTC 6908
Query 206364 TACTCTTCACCTTGT 206378
||||| || || ||
Sbjct 6907 CACTCTCCATCTCGT 6893
>seq558
Length=67963
Score = 84.2 bits (92), Expect = 5e-11
Identities = 148/215 (69%), Gaps = 3/215 (1%)
Strand=Plus/Minus
Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223
|||||| ||||| ||| || || || || || || || || || || || || ||
Sbjct 17321 AAAATG---CAGATCTTTGTGAAGACCCTGACGGGCAAGACTATTACCTTAGAGGTAGAG 17265
Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283
|| ||||| | || || ||| ||||||||||| || ||||| ||| ||
Sbjct 17264 TCATCAGACACCATTGACAATGTTAAGGCTAAGATTCAAGACAAGGAAGGCATTCCACCA 17205
Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343
||| || || | || |||||||| |||||| | || ||||| | || | || ||
Sbjct 17204 GACCAGCAGCGATTGATTTTCGCCGGTAAGCAGCTCGAGGATGGCCGAACGCTAGCTGAC 17145
Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGT 206378
|||||| ||||||| ||||| || || ||||||||
Sbjct 17144 TACAACATCCAGAAGGAGTCCACCCTCCACCTTGT 17110
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181169842023790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |