Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20habrochaites_20[genbank_20GCA_5F000577655.1_202014-02-21] 42,990 sequences; 724,284,658 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq796 140 3e-28 seq30006 125 6e-24 seq3886 125 6e-24 seq16835 107 2e-18 seq558 105 6e-18 seq545 98.7 9e-16 seq544 89.7 5e-13 >seq796 Length=44438 Score = 140 bits (154), Expect = 3e-28 Identities = 177/238 (74%), Gaps = 9/238 (4%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | | |||||| || | || ||| ||||||||||||||||||| Sbjct 18833 TTCCACCACGAAGACGGAGCACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCGG 18774 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | | ||| || | || || |||||||| |||||||| |||| || ||||||||| | | Sbjct 18773 CGAGGGTACGGCCATCTTCAAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGGTCTGGGG 18714 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGAT 35683 ||| || ||||||||| |||| || |||| | |||| | | ||||| ||| | Sbjct 18713 GAATGCCTTCCTTGTCCTGGATC-TTGGCTTTAACGTTGTCAATGGTGTCTGAGCT---T 18658 Query 35684 TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGT 35741 |||||||| | ||||| || || || || | ||||| ||||||||||||| ||||| Sbjct 18657 TCCACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTTTTGACAAATATCTGCA-TCTGT 18601 Score = 125 bits (138), Expect = 6e-24 Identities = 169/234 (72%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | | |||||| || | || ||||| || ||||||||||| | Sbjct 19061 TTCCACCACGAAGACGGAGCACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCAG 19002 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | | ||| | |||| || |||||||| |||||||| ||||| | ||||||||| | | Sbjct 19001 CAAGGGTCCTGCCGTCCTCAAGCTGCTTTCCCGCAAAGATCAATCTCTGCTGGTCTGGGG 18942 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATT 35684 ||| || ||||||||| |||||| ||| | | | | | ||||| ||| || Sbjct 18941 GAATGCCTTCCTTGTCCTGGATCTTAGCCTTAACATTGTCAATGGTGTCAGAGCT---TT 18885 Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 | ||||| | ||||| || || || |||||||||||||| || || ||||||| Sbjct 18884 CAACCTCAAGGGTGATGGTCTTTCCTGTCAAAGTTTTCACGAAAATTTGCATTC 18831 Score = 125 bits (138), Expect = 6e-24 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | | |||||| || | || ||||| || ||||||||||| | Sbjct 19289 TTCCACCACGAAGACGGAGCACCAAGTGAAGRGTTGATTCCTTYTGGATGTTGTAATCAG 19230 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | | ||| | |||| || |||||||| || ||||| ||||| | ||||||||| | | Sbjct 19229 CAAGGGTCCTGCCGTCCTCAAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCTGGGG 19170 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCC 35686 ||| || ||||||||| |||| || |||| | ||| | | |||||| ||| Sbjct 19169 GAATGCCTTCCTTGTCCTGGATC-TTGGCTTTAACATTGTCAATAGTGTCGGAGCTTTCA 19111 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 ||||| | ||||| || || || |||||||| |||||||| || ||||||| Sbjct 19110 ACCTCAAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACAAAAATTTGCATTC 19059 Score = 107 bits (118), Expect = 2e-18 Identities = 148/206 (72%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 35534 TGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGC 35593 || || ||| ||||||||| |||||||| || |||| || | | || || |||||| Sbjct 20175 TGCAAAGTAGACTCCTTTTGGATGTTGTAGTCCGCCAGAGTCCTTCCATCTTCAAGCTGC 20116 Query 35594 TTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTT 35653 || || ||||| |||| | ||||||||||| || | | |||||||||| ||||| Sbjct 20115 TTCCCTGCAAAGATCAGTCTCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGAATCTTA 20056 Query 35654 TGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCC 35710 ||||| | | | | || || ||| |||||||||| || || ||||| || Sbjct 20055 GCCTTCACATTGTCAATGGTATCAGAACTC---TCCACCTCCAAAGTTATGGTTTTCCCA 19999 Query 35711 GTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| || |||||||| |||||||| Sbjct 19998 GTCAAGGTCTTCACAAAAATCTGCAT 19973 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 ||||||| || | | || ||||| || | || |||||| || ||||||||||||| Sbjct 19745 TTCCACCTCGGAGACGCAGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCGG 19686 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | || || | | || |||| |||||| || ||||| ||||||| ||||||||| | | Sbjct 19685 CTAATGTCCTTCCATCTTCCAACTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGTG 19626 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686 ||| | || |||||| ||| ||| | ||| | | | | | ||||| |||| Sbjct 19625 GAATACCTTCTTTGTCC-TGAATTTTGGCCTTAACATTGTCAATGGTGTCAGAACTTTCC 19567 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | ||||| || || || ||||| || |||||||| || ||||| Sbjct 19566 ACCTCAAGGGTGATTGTCTTGCCAGTCAAGGTCTTCACAAAGATTTGCAT 19517 Score = 100 bits (110), Expect = 3e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 35521 CCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTC 35580 ||||||||| | ||| | || ||||| ||||| ||||||||||| || || | | Sbjct 19960 CCTCAACACAAGATGAAGGGTTGATTCCTTCTGAATATTGTAATCGGCTAATGTCCTTCC 19901 Query 35581 GTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTT 35640 || |||| |||||| || ||||| ||||||| |||||||| | || | | ||| || Sbjct 19900 ATCTTCCAACTGCTTGCCAGCAAAAATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTT 19841 Query 35641 GTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGA 35699 |||| ||||| ||| | |||| | | |||||| ||||||||| | || | Sbjct 19840 GTCCTGAATCTTGGCCTTTA-CGTTGTCAATGGTGTCGGAGCTTTCCACCTCAAGGGTAA 19782 Query 35700 TCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 | || || || ||||| || ||||| || || ||||||| Sbjct 19781 TAGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCATTC 19743 >seq30006 Length=21699 Score = 125 bits (138), Expect = 6e-24 Identities = 149/201 (74%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 35541 TACTCTCCTTT-TGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 |||| ||||| |||||||||||||| || | || || | || || |||||||| || Sbjct 12900 TACTTACCTTTCTGAATGTTGTAATCAGCTAGAGTACGTCCATCTTCGAGCTGCTTTCCG 12841 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 || || ||||| ||||||||||||| |||| | |||||||| ||||| || Sbjct 12840 GCGAAGATCAATCGCTGCTGGTCCGGTGGAATACCTTCCTTGTCTTGAATCTTAGCTTTG 12781 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | | |||||||| ||||| || || | ||||||||| || ||||| | |||| Sbjct 12780 ACATTGTCAATAGTGTCGCTTGATTCAACTTCAAGCGTGATCGTCTTCCCCGTAAGAGTT 12721 Query 35720 TTCACAAATATCTGCATTCTG 35740 ||||| || ||||||||| || Sbjct 12720 TTCACGAAGATCTGCATTTTG 12700 >seq3886 Length=20373 Score = 125 bits (138), Expect = 6e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| || |||| || ||||||||||| || || Sbjct 13262 CTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAA 13321 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| ||||||||| | |||| | |||||||||| |||||| ||| | | | Sbjct 13322 GATCAACCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTAACATT 13381 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| ||||||||||| ||||| || || || || | || ||||| Sbjct 13382 ATCAATGGTGTCGGAGCTTTCCACCTCCAAAGTGATGGTCTTTCCGGTGAGGGTCTTCAC 13441 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 13442 AAAAATCTGCAT 13453 Score = 109 bits (120), Expect = 5e-19 Identities = 143/197 (73%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || ||||| || || | ||| || | || || ||||||||||| || || Sbjct 12806 CTCCTTCTGGATATTGTAGTCAGCAAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAA 12865 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| ||||||||| | || | | |||||||||| ||||| |||| | | Sbjct 12866 GATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTGAATCTTAGCTTTCACATT 12925 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | ||||| ||| |||||||||| ||||| || || || ||||| || || Sbjct 12926 GTCGATGGTGTCAGAACTC---TCCACCTCCAAAGTGATGGTCTTCCCGGTCAAGGTCTT 12982 Query 35722 CACAAATATCTGCATTC 35738 |||||| |||||||||| Sbjct 12983 CACAAAGATCTGCATTC 12999 Score = 102 bits (112), Expect = 7e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || ||||| || | || || |||||||| || || || Sbjct 13490 CTCCTTCTGGATGTTGTAGTCAGCTAAGGTGCGGCCATCCTCGAGCTGCTTCCCAGCGAA 13549 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| ||||||||| | || | | ||||| ||| |||||| ||||| || Sbjct 13550 GATCAACCTCTGCTGGTCTGGGGGGATCCCTTCCTTATCCTGGATCTTAGCCTTCAC-GT 13608 Query 35665 TGCCACCG-TGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || || | ||||| ||||||||||| ||||| || || || || | ||| || | Sbjct 13609 TGTCAATGGTGTCGGAGCTTTCCACCTCCAAAGTGATGGTCTTTCCGGTAAGAGTCTTAA 13668 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 13669 CGAAGATCTGCAT 13681 >seq16835 Length=8075 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | || || | || || |||||||| || || || Sbjct 6910 CTCCTTCTGGATGTTGTAGTCGGCAAGAGTACGACCATCCTCAAGCTGCTTTCCGGCGAA 6969 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | |||| | ||||||||| |||||| || | | | Sbjct 6970 AATCAAACGCTGCTGGTCTGGGGGAATCCCTTCCTTGTCCTGGATCTTGGCTTTGACATT 7029 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||| | |||||||| || ||||| | |||||||| Sbjct 7030 GTCGATGGTGTCGGAAGACTCAACCTCTAGGGTGATCGTCTTCCCCGTTAGGGTTTTCAC 7089 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 7090 GAAGATCTGCAT 7101 >seq558 Length=67963 Score = 105 bits (116), Expect = 6e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | ||||| | || || ||||||||||| || || Sbjct 17127 CTCCTTCTGGATGTTGTAGTCAGCTAGCGTTCGGCCATCCTCGAGCTGCTTACCGGCGAA 17186 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | |||| || |||||||| ||||| ||| | | | Sbjct 17187 AATCAATCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCTTGAATCTTAGCCTTAACATT 17246 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || || ||||| | || || || || ||||||| || ||||| Sbjct 17247 GTCAATGGTGTCTGATGACTCTACCTCTAAGGTAATAGTCTTGCCCGTCAGGGTCTTCAC 17306 Query 35725 AAATATCTGCATT 35737 ||| ||||||||| Sbjct 17307 AAAGATCTGCATT 17319 >seq545 Length=31085 Score = 98.7 bits (108), Expect = 9e-16 Identities = 141/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || |||||||||||||| ||||| || | | || || || ||||| || ||||| Sbjct 3059 TCTTTCTGAATGTTGTAATCTGCCAACGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAG 3000 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| | ||||||||| | ||||| | ||||||||| |||| ||||||| | || Sbjct 2999 ATCAATCTCTGCTGGTCTGGAGGAATACCCTCCTTGTCTTGGATC-TTTGCTTTAACATT 2941 Query 35666 G-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | | || || ||| || ||||||| || || || || || ||||| || || Sbjct 2940 GTCGATGGTATCTGAACTC---TCAACCTCCAAAGTAATTGTCTTCCCTGTCAATGTCTT 2884 Query 35722 CACAAATATCTGCAT 35736 |||||||| ||||| Sbjct 2883 GACAAATATTTGCAT 2869 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | ||||| || | ||| | ||| ||| || || ||||| || || || Sbjct 3779 CCGCCACGGAGCCTCAGGACAAGATGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGCA 3720 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || ||||||||||| ||||| || | || ||| || || | || Sbjct 3719 AGGGTGCGACCATCCTCAAGCTGCTTACCAGCAAAGATGAGCCTCTGTTGATCTGGTGGG 3660 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | | ||||||||| |||||| |||| | | | | || || |||| ||| Sbjct 3659 ATCCCTTCCTTGTCCTGTATCTTTGCTTTCACATTGTCAATAGTATCAGAGCTC---TCC 3603 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| ||||| || || || |||| ||| |||||||| |||||||| Sbjct 3602 ACCTCCAATGTGATTGTCTTCCCAGTCAGAGTCTTCACAAAGATCTGCAT 3553 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/198 (72%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| ||||||||||| || | ||||| | || || ||||| || || ||||| Sbjct 2604 CTCCTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCATCTTCAAGCTGTTTCCCAGCAAA 2545 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663 |||| || ||||||||| | |||| | ||||||| | ||| ||| || || | | Sbjct 2544 GATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTGT-CTTGAATTTTAGCTTTGACAT 2486 Query 35664 TTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 | | | ||||| |||| || ||||| | || || || || || |||| ||||| Sbjct 2485 TATCGATGGTGTCTGAGCTC---TCGACCTCAAGAGTTATAGTCTTCCCGGTCAGAGTTT 2429 Query 35721 TCACAAATATCTGCATTC 35738 | ||||| || ||||||| Sbjct 2428 TAACAAAGATTTGCATTC 2411 Score = 93.3 bits (102), Expect = 4e-14 Identities = 164/235 (70%), Gaps = 8/235 (3%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||||| | | || | || | ||| ||| ||||| ||||||||||| | Sbjct 2413 TTCCACCACGTAGACGGAGGACAAGGTGAAGGGTAGACTCTTTTTGGATGTTGTAATCAG 2354 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | | ||||| | || || ||||| || || ||||| |||| || ||||||||| | | Sbjct 2353 CAAGTGTTCGGCCATCTTCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGG 2294 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTC---GCTCGAT 35683 ||| | ||||||| | ||| ||| || || | | | | | ||||| |||| Sbjct 2293 GAATACCTTCCTTGT-CTTGAATTTTAGCTTTGACATTATCGATGGTGTCTGAGCTC--- 2238 Query 35684 TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || ||||| | || || || || || |||| |||||| ||||| || ||||||| Sbjct 2237 TCGACCTCAAGAGTTATAGTCTTCCCGGTCAGAGTTTTAACAAAGATTTGCATTC 2183 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/232 (68%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||||| | | || | || | ||| ||| ||||| ||||||||||| | Sbjct 2185 TTCCACCACGTAGACGGAGGACAAGRTGAAGGGTAGACTCTTTTTGGATGTTGTAATCAG 2126 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | | ||||| | || || ||||| || || ||||| |||| | |||||| || | || Sbjct 2125 CAAGTGTTCGGCCATCTTCAAGCTGTTTCCCAGCAAAGATCAGTCTCTGCTGATCTGGAG 2066 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATT 35684 ||| || |||||||| ||||| || | | | | | ||||| ||| | Sbjct 2065 GAATGCCTTCCTTGTCTTGAATCTTAGCTTTGACATTATCAATGGTGTCAGAACTC---T 2009 Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | ||||| | ||||| || || || || | || || |||||||||||||| Sbjct 2008 CGACCTCAAGAGTGATGGTCTTTCCGGTGAGTGTCTTAACAAATATCTGCAT 1957 >seq544 Length=28317 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/195 (72%), Gaps = 13/195 (7%) Strand=Plus/Plus Query 35549 TTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATC 35608 || |||||||||||||| |||||||| | | || || || |||| || ||||||||| Sbjct 21658 TTCTGAATGTTGTAATCTGCCAAGGTCCTTCCATCTTCAAGTTGCTCTCCAGCAAATATC 21717 Query 35609 AACCGCTGCTGGTCCGAAGGAACGCTCTCC-TTGTCCATGATCTTTTGCTT---CAGAGT 35664 || | |||||||| | ||||| | |||| ||||| |||| ||||||| || || Sbjct 21718 AATCTCTGCTGGTTTGGAGGAATACCCTCCTTTGTCTTGGATC-TTTGCTTTAACATTGT 21776 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 || | || || ||| || ||||||| || || || || || ||||| || || Sbjct 21777 TG--ATAGTATCTGAACTC---TCAACCTCCAAAGTAATTGTCTTCCCTGTCAATGTCTT 21831 Query 35722 CACAAATATCTGCAT 35736 |||||||| ||||| Sbjct 21832 AACAAATATTTGCAT 21846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450551354789200