Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20habrochaites_20[genbank_20GCA_5F000577655.1_202014-02-21]
42,990 sequences; 724,284,658 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq16835 136 4e-27
seq3886 129 6e-25
seq796 123 3e-23
seq558 122 9e-23
seq545 122 9e-23
seq572 93.3 4e-14
seq4902 89.7 5e-13
>seq16835
Length=8075
Score = 136 bits (150), Expect = 4e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | |||||| || || ||||| ||||| || |||||||||||| ||
Sbjct 6875 CCACCACGGAGACGGAGCACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCA 6934
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || || || || ||||| || || || ||||||||||||||||| || || ||
Sbjct 6935 AGAGTACGACCATCCTCAAGCTGCTTTCCGGCGAAAATCAAACGCTGCTGGTCTGGGGGA 6994
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || || || || || |||||| ||| | |||||||| || || ||
Sbjct 6995 ATCCCTTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCGGAAGACTCAACC 7054
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|| || || || || || || |||| ||||| ||||| || ||||| ||
Sbjct 7055 TCTAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 7104
>seq3886
Length=20373
Score = 129 bits (142), Expect = 6e-25
Identities = 168/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CG 134543
||||||| || || | | ||| | ||| || || || |||||||| |||||||||| ||
Sbjct 12997 TTCCTCCCCTCAGCCTAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCCG 13056
Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603
|||| ||| | || |||||||| ||||| ||||||||||| | |||||| || ||
Sbjct 13057 CCAA-AGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGG 13115
Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663
|| || || || || ||||| || || ||||| ||| | |||||||| ||
Sbjct 13116 GGAATACCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTCTCA 13175
Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || |||||||| ||||| | || ||||| || ||||||||
Sbjct 13176 ACCTCCAGGGTGATGGTTTTCCCGGTAAGGGTCTTAACAAAGATTTGCAT 13225
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| || || || ||||| || |||||||||||| ||| |||| | ||| |||
Sbjct 13245 ACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCG 13304
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| || || || || ||||| | |||||| || || || || || || || || ||
Sbjct 13305 AGCTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGG 13364
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || || || || | |||||||| |||||| || | ||| ||||| ||
Sbjct 13365 ATCTTAGCCTTAACATTATCAATGGTGTCGGAGCTTTCCACCTCCAAAGTGATGGTCTTT 13424
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| | || || || ||||| |||||
Sbjct 13425 CCGGTGAGGGTCTTCACAAAAATCTGCAT 13453
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || || || || || || ||||| || ||||||||||| |
Sbjct 13455 CCACCACGGAGACGGAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCT 13514
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || |||||||| || || || || ||||| | |||||| || || ||
Sbjct 13515 AAGGTGCGGCCATCCTCGAGCTGCTTCCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGG 13574
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || || || || || || || ||| | |||||||| ||||||
Sbjct 13575 ATCCCTTCCTTATCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTTTCCACC 13634
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||| ||||| || ||||| | ||| |||||||| || |||||
Sbjct 13635 TCCAAAGTGATGGTCTTTCCGGTAAGAGTCTTAACGAAGATCTGCAT 13681
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| | || || ||||| ||||| || ||||||||||| |
Sbjct 13683 CCACCACGGAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCT 13742
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || | ||| || |||||||| ||||| | |||||| || || ||
Sbjct 13743 AGGGTGCGGCCATCTTCCAACTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGA 13802
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || || || || || ||||| ||| | ||||| || ||| ||
Sbjct 13803 ATGCCTTCCTTATCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTTTCGACC 13862
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || ||||| || ||||| || | ||| || ||||| || |||||
Sbjct 13863 TCAAGGGTAATCGTCTTACCCGTAAGAGTCTTCACGAAGATCTGCAT 13909
>seq796
Length=44438
Score = 123 bits (136), Expect = 3e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
|||| || | || || | ||| | ||| || || |||||||| || |||||||| ||
Sbjct 19289 TTCCACCACGAAGACGGAGCACCAAGTGAAGRGTTGATTCCTTYTGGATGTTGTAATCAG 19230
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
||| ||| ||| || ||||| || || ||||| ||||| | |||||| || || |
Sbjct 19229 CAAGGGTCCTGCCGTCCTCAAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCTGGGG 19170
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
| |||||||| || || || || || ||| || ||| | |||||||| ||| |
Sbjct 19169 GAATGCCTTCCTTGTCCTGGATCTTGGCTTTAACATTGTCAATAGTGTCGGAGCTTTCAA 19110
Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
| || || || ||||| || ||||| ||||| || || ||||||||||||
Sbjct 19109 CCTCAAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACAAAAATTTGCATT 19060
Score = 118 bits (130), Expect = 1e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
|||| || | || || | ||| | ||| || || |||||||| || |||||||| ||
Sbjct 19061 TTCCACCACGAAGACGGAGCACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCAG 19002
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
||| ||| ||| || ||||| || || ||||| ||||| | |||||| || || |
Sbjct 19001 CAAGGGTCCTGCCGTCCTCAAGCTGCTTTCCCGCAAAGATCAATCTCTGCTGGTCTGGGG 18942
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
| |||||||| || || || || || || || ||| | ||||| || ||| |
Sbjct 18941 GAATGCCTTCCTTGTCCTGGATCTTAGCCTTAACATTGTCAATGGTGTCAGAGCTTTCAA 18882
Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
| || || || ||||| || || || |||||||| |||||||||||||||
Sbjct 18881 CCTCAAGGGTGATGGTCTTTCCTGTCAAAGTTTTCACGAAAATTTGCATT 18832
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| ||||| | |||||| || || || || |||||||| ||||| ||||| ||| |
Sbjct 19971 CCTCCCCTGAGCCTCAACACAAGATGAAGGGTTGATTCCTTCTGAATATTGTAATCGGCT 19912
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || || || | ||| ||||| ||||||||||| | ||||| || || ||
Sbjct 19911 AATGTCCTTCCATCTTCCAACTGCTTGCCAGCAAAAATCAACCTTTGCTGGTCTGGTGGG 19852
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || ||||| || ||||| || || || ||| | |||||||| ||||||
Sbjct 19851 ATACCCTCTTTGTCCTGAATCTTGGCCTTTACGTTGTCAATGGTGTCGGAGCTTTCCACC 19792
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
|| || ||||| || || || || || || || ||||| |||||||||
Sbjct 19791 TCAAGGGTAATAGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCATT 19744
Score = 109 bits (120), Expect = 6e-19
Identities = 147/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || || || ||||| || ||||| || || ||| ||| | ||| || |||||
Sbjct 19492 GTGAAGGGTTGACTCCTTCTGGATGTTATAATCAGCAAGGGTCCGGCCGTCCTCAAGCTG 19433
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
|| || ||||| ||||| | |||||| || || || |||||||| || || || || ||
Sbjct 19432 CTTTCCGGCAAAGATCAATCTCTGCTGGTCTGGTGGAATGCCTTCCTTGTCCTGGATCTT 19373
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
||| || ||| | |||||||| ||| || || || || ||||| || |||||
Sbjct 19372 GGCTTTAACATTGTCAATAGTGTCGGAGCTTTCAACCTCAAGGGTGATGGTCTTTCCGGT 19313
Query 134690 TAAAGTTTTAACGAAAATTTGCATT 134714
|| || || || ||||||||||||
Sbjct 19312 CAAGGTCTTCACAAAAATTTGCATT 19288
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
|||| || | || || | ||| | ||| || ||||| || |||||||||||||| |||
Sbjct 18833 TTCCACCACGAAGACGGAGCACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCGG 18774
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
| | ||| | || || ||||| ||||| ||||| |||| | |||||| || || |
Sbjct 18773 CGAGGGTACGGCCATCTTCAAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGGTCTGGGG 18714
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
| |||||||| || || || || || ||| || ||| | ||||| || |||||
Sbjct 18713 GAATGCCTTCCTTGTCCTGGATCTTGGCTTTAACGTTGTCAATGGTGTCTGAGCTTTCCA 18654
Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
| || || || ||||| || || || | ||||| || || || |||||
Sbjct 18653 CCTCAAGGGTGATGGTCTTTCCAGTGAGGGTTTTGACAAATATCTGCAT 18605
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCC 134545
|| || | ||| || | || ||||| | || || |||||||| |||||||||| ||||
Sbjct 20199 CCACCACGGAGACGGAGGACAAGGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCCGCC 20140
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| | | | || || ||||| || |||||||| |||| | |||||| || || ||
Sbjct 20139 AGAGTCCTTCCA-TCTTCAAGCTGCTTCCCTGCAAAGATCAGTCTCTGCTGGTCCGGTGG 20081
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || || || || ||||| || || || ||| | || || || |||||
Sbjct 20080 GATTCCCTCCTTGTCCTGAATCTTAGCCTTCACATTGTCAATGGTATCAGAACTCTCCAC 20021
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||| |||||||| || || || || || || ||||| |||||
Sbjct 20020 CTCCAAAGTTATGGTTTTCCCAGTCAAGGTCTTCACAAAAATCTGCAT 19973
>seq558
Length=67963
Score = 122 bits (134), Expect = 9e-23
Identities = 167/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| || | ||| || | ||| ||||| || ||||||||||| || ||||||||||| ||
Sbjct 63860 CCACCACGGAGACGAAGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCT 63801
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| || | | | || || ||||| || |||||||||||||| | |||||| || || ||
Sbjct 63800 AGCGTTCGGCCA-TCCTCAAGCTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCTGGTGG 63742
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|||||||| || || ||||| || || || ||| | ||||| || || || ||
Sbjct 63741 GATGCCTTCCTTGTCCTGAATCTTAGCCTTAACATTGTCAATGGTGTCTGATGACTCTAC 63682
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|| | ||||| || || || |||| || || || || || ||||||||
Sbjct 63681 CTCTAAGGTAATAGTCTTGCCCGTTAGGGTCTTCACAAAGATCTGCATTTT 63631
Score = 113 bits (124), Expect = 5e-20
Identities = 165/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| || | ||| || | || ||||| || ||||| ||||| || ||||||||||| ||
Sbjct 17092 CCACCACGGAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCT 17151
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| || | | | || |||||||| || || || |||||||| |||||||| || || ||
Sbjct 17152 AGCGTTCGGCCA-TCCTCGAGCTGCTTACCGGCGAAAATCAATCGCTGCTGGTCTGGTGG 17210
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|||||||| || |||||||| || || || ||| | ||||| || || || ||
Sbjct 17211 AATGCCTTCCTTGTCTTGAATCTTAGCCTTAACATTGTCAATGGTGTCTGATGACTCTAC 17270
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|| | ||||| || || || || | || || || || || ||||||||
Sbjct 17271 CTCTAAGGTAATAGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATTTT 17321
>seq545
Length=31085
Score = 122 bits (134), Expect = 9e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| || ||||| |||||||| |||||||| || ||| || | || ||
Sbjct 2621 ACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCATCTTCA 2562
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
|||||||| || ||||| |||| | |||||| || || || || ||||| || ||||||
Sbjct 2561 AGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCTTGA 2502
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
||||| |||||| || | ||||| || || || || ||||| || || ||
Sbjct 2501 ATTTTAGCTTTGACATTATCGATGGTGTCTGAGCTCTCGACCTCAAGAGTTATAGTCTTC 2442
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
||||| | ||||||||| || |||||||||
Sbjct 2441 CCGGTCAGAGTTTTAACAAAGATTTGCATT 2412
Score = 114 bits (126), Expect = 1e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|||||||| | |||||||| || || || || || ||||| || ||||||||||| ||
Sbjct 3323 CCTCCTCTCAAACGCAACACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGCA 3264
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || || || || ||||| || ||||| ||||||||||| || || || ||
Sbjct 3263 AGAGTCCTCCCRTCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGGGGGA 3204
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || |||||||| ||| ||| || ||| | || || || || ||
Sbjct 3203 ATACCCTCCTTGTCTTGAATCTTTGCTTTCACATTGTCAATGGTATCTGAACTCTCAACC 3144
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||||| || || || || ||||| || || |||||||||||
Sbjct 3143 TCCAATGTAATTGTCTTCCCAGTCAAAGTCTTGACAAAAATTTGCAT 3097
Score = 113 bits (124), Expect = 5e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| || || || || ||||| |||||||| || ||| || | || ||
Sbjct 2393 ACAAGGTGAAGGGTAGACTCTTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCATCTTCA 2334
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
|||||||| || ||||| |||| | |||||| || || || || ||||| || ||||||
Sbjct 2333 AGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCTTGA 2274
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
||||| |||||| || | ||||| || || || || ||||| || || ||
Sbjct 2273 ATTTTAGCTTTGACATTATCGATGGTGTCTGAGCTCTCGACCTCAAGAGTTATAGTCTTC 2214
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
||||| | ||||||||| || |||||||||
Sbjct 2213 CCGGTCAGAGTTTTAACAAAGATTTGCATT 2184
Score = 100 bits (110), Expect = 3e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|||||||| | |||||||| || || || || || ||||| || ||||||||||| ||
Sbjct 3551 CCTCCTCTCAAACGCAACACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGCA 3492
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || || || || ||||| || ||||| ||||||||||| || || || ||
Sbjct 3491 AGAGTCCTCCCRTCCTCAAGWTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGGGGGA 3432
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || |||||||| ||| ||| || ||| | || || || || ||
Sbjct 3431 ATACCCTCCTTGTCTTGAATCTTTGCTTTCACATTGTCAATGGTATCTGAACTCTCAACC 3372
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | || || || || || || ||||| || || || || |||||
Sbjct 3371 TCCAATGTGATTGTCTTCCCAGTCAAAGTCTTCACAAAGATCTGCAT 3325
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| || || | || ||||| || || ||||| || ||||||||||| || |||
Sbjct 3095 CCACCTCTAAGGCGAAGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTAATCTGCC 3036
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|||| | | || || || || || || ||||| ||||| | |||||| || || ||
Sbjct 3035 AACGTCCTTCCA-TCCTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGAGG 2977
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || || || ||||| || ||| ||| || ||| | || || || || ||
Sbjct 2976 AATACCCTCCTTGTCTTGGATCTTTGCTTTAACATTGTCGATGGTATCTGAACTCTCAAC 2917
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | |||||| || || || || || || || || || ||||||||
Sbjct 2916 CTCCAAAGTAATTGTCTTCCCTGTCAATGTCTTGACAAATATTTGCAT 2869
>seq572
Length=122185
Score = 93.3 bits (102), Expect = 4e-14
Identities = 104/139 (75%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
||||||| ||||| | || || ||||| || || ||||| || ||||||||||| ||
Sbjct 87944 TTCCTCCCCTGAGCCTCAGAACAAGGTGAAGAGTTGATTCTTTCTGAATGTTGTAATCAG 88003
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
| | ||| || || | |||||| || |||||||||| | ||||||||| || |
Sbjct 88004 CGAGGGTTCTCCCATCTTCCAACTGTTTTCCAGCAAAAATCAGTCTCTGCTGATCAGGAG 88063
Query 134605 GTATGCCTTCTTTTTCTTG 134623
||||||||||||| || ||
Sbjct 88064 GTATGCCTTCTTTATCCTG 88082
>seq4902
Length=4857
Score = 89.7 bits (98), Expect = 5e-13
Identities = 149/210 (71%), Gaps = 4/210 (2%)
Strand=Plus/Plus
Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGT 134562
||| || ||||| || |||| || || ||| ||||||| ||||| |||| | || |
Sbjct 821 CACTAGATGTAGAGTTGATTTTTTCTGGATGCTGTAGTCCGCCAA-GGTGAGGCCATCCT 879
Query 134563 CGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTT 134622
||||||| || || |||||||||| | ||||| || || || | ||||||| ||||
Sbjct 880 CGAGCTGCTTACCAGCAAAAATCAGCCTTTGCTGGTCTGGAGGGTTTTCTTCTTTGTCTT 939
Query 134623 GAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTT 134682
| || || || | ||| | || | | |||| || || |||||||||||||
Sbjct 940 GTATCTTGGCCTTAGCATTGTCGATAGTATTGCTGAATTCGACATCCAGAGTAATGGTTT 999
Query 134683 TACCGGTTAAAGTTTTAACGAAAAT-TTGC 134711
||| || || |||||| ||||| || ||||
Sbjct 1000 TACTGG-TAGAGTTTTCACGAATATCTTGC 1028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505126811534800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |