Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20habrochaites_20[genbank_20GCA_5F000577655.1_202014-02-21] 42,990 sequences; 724,284,658 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq1907 105 3e-18 >seq1907 Length=59525 Score = 105 bits (116), Expect = 3e-18 Identities = 159/224 (71%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 65086 TCGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATT 65145 ||| || ||||||||||||||||| |||| ||| | ||| || |||| | | | Sbjct 43648 TCGAGTGCCAAACTGACCATTTGGTTGCAATAGATTTACATTATTGCTGCCAACATAGTC 43707 Query 65146 CTGAGCCATTCCGATAAT--TGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAA 65203 || ||||| || || || |||||| | | |||| ||||| |||||||| |||| Sbjct 43708 TTGTGCCATGCCAATGATGGTGCTGC--TAAGACTCTGCTCACCATGATGATAAGCTGAG 43765 Query 65204 TGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTA 65263 || ||||||||||| ||| |||||| | ||||||| |||| | |||||| | ||| Sbjct 43766 TGCTCAGAGACATAACCAGAAAATTGGGAAACTTTTGCTTCCTTAACAAAATTCCTCTTA 43825 Query 65264 AATGCAGAATACAATATTTTCCGTAAACTAATTTTCAATCCATC 65307 |||||| | ||| || |||| | || |||||| ||||| Sbjct 43826 AATGCACAGAACAGAATCTTCCTTTGACCCGGTTTCAAACCATC 43869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235556517673500