Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20habrochaites_20[genbank_20GCA_5F000577655.1_202014-02-21]
42,990 sequences; 724,284,658 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq3766 91.5 1e-13
>seq3766
Length=112782
Score = 91.5 bits (100), Expect = 1e-13
Identities = 92/120 (77%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 34610 TTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGG 34669
|| || || || ||||| ||||| ||||| ||| | ||||| ||||| | || |||||
Sbjct 67906 TTTTATGTAGCCAATGGAGAGCTATCCTGTCAGATGTATCAGCGATCTGCCGATATGGGT 67965
Query 34670 TTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729
|| || ||||| ||||||||||| ||| || |||| || | |||||| |||||||||
Sbjct 67966 TTGGGAGTGCCATTCAACATTGCATCTTATGCCTTGCTGACATGCATGATAGCTCATGTC 68025
Score = 91.5 bits (100), Expect = 1e-13
Identities = 92/120 (77%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675
||||||||| |||||| | || |||| || ||| ||||||||||| ||||| || ||
Sbjct 68025 GACATGAGCTATCATGCATGTCAGCAAGGCATAAGATGCAATGTTGAATGGCACTCCCAA 67966
Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735
||||| || | ||||| ||||| | ||| ||||| ||||| ||||| || || || ||
Sbjct 67965 ACCCATATCGGCAGATCGCTGATACATCTGACAGGATAGCTCTCCATTGGCTACATAAAA 67906
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448021514992800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |