Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20habrochaites_20[genbank_20GCA_5F000577655.1_202014-02-21] 42,990 sequences; 724,284,658 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq3766 91.5 1e-13 >seq3766 Length=112782 Score = 91.5 bits (100), Expect = 1e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 34610 TTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGG 34669 || || || || ||||| ||||| ||||| ||| | ||||| ||||| | || ||||| Sbjct 67906 TTTTATGTAGCCAATGGAGAGCTATCCTGTCAGATGTATCAGCGATCTGCCGATATGGGT 67965 Query 34670 TTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729 || || ||||| ||||||||||| ||| || |||| || | |||||| ||||||||| Sbjct 67966 TTGGGAGTGCCATTCAACATTGCATCTTATGCCTTGCTGACATGCATGATAGCTCATGTC 68025 Score = 91.5 bits (100), Expect = 1e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 ||||||||| |||||| | || |||| || ||| ||||||||||| ||||| || || Sbjct 68025 GACATGAGCTATCATGCATGTCAGCAAGGCATAAGATGCAATGTTGAATGGCACTCCCAA 67966 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 ||||| || | ||||| ||||| | ||| ||||| ||||| ||||| || || || || Sbjct 67965 ACCCATATCGGCAGATCGCTGATACATCTGACAGGATAGCTCTCCATTGGCTACATAAAA 67906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448021514992800