Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20habrochaites_20[genbank_20GCA_5F000577655.1_202014-02-21] 42,990 sequences; 724,284,658 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq3886 143 2e-29 seq16835 141 7e-29 seq796 141 7e-29 seq558 127 1e-24 seq545 116 3e-21 seq30006 113 3e-20 seq544 84.2 2e-11 >seq3886 Length=20373 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || |||||| ||||||||||| ||||| || ||| |||| || Sbjct 13245 ACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCG 13304 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || |||||||| | |||||| |||| || | || ||||| ||| Sbjct 13305 AGCTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGG 13364 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||||| | ||||||||||| || || |||||| Sbjct 13365 ATCTTAGCCTTAACATTATCAATGGTGTCGGAGCTTTCCACCTCCAAAGTGATGGTCTTT 13424 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||||||||||||| || || ||||| Sbjct 13425 CCGGTGAGGGTCTTCACAAAAATCTGCAT 13453 Score = 136 bits (150), Expect = 3e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| || || ||| |||||| ||||||||||| || || || ||| | || || Sbjct 13700 CACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGGGTGCGGCCATCTTC 13759 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || |||||| || ||||||||||| | |||||| |||| || | |||||||| ||| Sbjct 13760 CAACTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTATCCTG 13819 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | |||||||| | | ||| ||||| | ||||||||||| Sbjct 13820 GATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTTTCGACCTCAAGGGTAATCGTCTT 13879 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || |||||||||||||| ||||| Sbjct 13880 ACCCGTAAGAGTCTTCACGAAGATCTGCAT 13909 Score = 131 bits (144), Expect = 1e-25 Identities = 170/233 (73%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || ||||| || | ||||| ||| || || |||||||||||||||||| || Sbjct 12995 CATTCCTCCCCTCAGCCTAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTC 13054 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || | ||| | || || |||||||| || ||||| ||||| | |||||| |||| Sbjct 13055 CGCCAAAGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGG 13114 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284 || | ||| ||||| || ||||| ||| || ||| | |||||||||| | Sbjct 13115 GGGAATACCCTCCTTGTCTTGGATCTTGGCCTTGACATTGT--CAATGGTGTCGGAGCTC 13172 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||| || || || || || || |||||||| || ||||||||||| Sbjct 13173 TCAACCTCCAGGGTGATGGTTTTCCCGGTAAGGGTCTTAACAAAGATTTGCAT 13225 Score = 131 bits (144), Expect = 1e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| ||||||||||| || || | ||| | || || ||||||||||| || || Sbjct 13490 CTCCTTCTGGATGTTGTAGTCAGCTAAGGTGCGGCCATCCTCGAGCTGCTTCCCAGCGAA 13549 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 |||||| | |||||| |||| || | |||||||| ||| ||||| ||||| | Sbjct 13550 GATCAACCTCTGCTGGTCTGGGGGGATCCCTTCCTTATCCTGGATCTTAGCCTTCACGTT 13609 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||||| | ||||||||||| || || |||||||| || || ||||| || Sbjct 13610 GTCAATGGTGTCGGAGCTTTCCACCTCCAAAGTGATGGTCTTTCCGGTAAGAGTCTTAAC 13669 Query 44326 GAAGATTTGCAT 44337 |||||| ||||| Sbjct 13670 GAAGATCTGCAT 13681 Score = 107 bits (118), Expect = 1e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| || || ||| |||||| |||||||| ||||| || || || |||| || Sbjct 13928 CACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAATCAGCTAGAGTCCGTCCGTCCTC 13987 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || |||||| ||||| ||||| | | |||||||| | || | |||||||| ||| Sbjct 13988 CAACTGCTTTCCGGCGAAGATAAGCCTTTGCTGATCAGGGGGAATCCCTTCCTTGTCCTG 14047 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | || || || | ||||||||| | || || |||| Sbjct 14048 GATCTTAGCCTT-AACGTTGTCGATTGTATCAGAACTTTCCACCTCTAGGGTGATAGTCT 14106 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| ||||| || ||||||||||| ||||| Sbjct 14107 TTCCGGTGAGAGTTTTCACGAAGATCTGCAT 14137 >seq16835 Length=8075 Score = 141 bits (156), Expect = 7e-29 Identities = 161/213 (76%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| || || || ||| |||||| ||||||||||| ||||| || || | || || Sbjct 6892 CACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTACGACCATCCTC 6951 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| || |||||||||||||| |||| || | |||||||| ||| Sbjct 6952 AAGCTGCTTTCCGGCGAAAATCAAACGCTGCTGGTCTGGGGGAATCCCTTCCTTGTCCTG 7011 Query 44248 TATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 ||||| |||| || ||| | |||||||||| || || ||||| | || ||||| Sbjct 7012 GATCTT-GGCTTTGACATTGT--CGATGGTGTCGGAAGACTCAACCTCTAGGGTGATCGT 7068 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||| ||||| ||||||||||| ||||| Sbjct 7069 CTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 7101 >seq796 Length=44438 Score = 141 bits (156), Expect = 7e-29 Identities = 174/235 (74%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| || | || | | ||||| |||||| ||| ||| ||||| |||||||| Sbjct 18838 TTGCATTCCACCACGAAGACGGAGCACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTA 18779 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||||||||| || | || || |||||||| || |||||||||| | |||||| || Sbjct 18778 ATCGGCGAGGGTACGGCCATCTTCAAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGGTC 18719 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGG 44282 || || | |||||||| ||| ||||| |||| || ||| | |||||||| | | Sbjct 18718 TGGGGGAATGCCTTCCTTGTCCTGGATCTT-GGCTTTAACGTTGTCAATGGTGTCTGAGC 18660 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||| | || || |||||||| |||||||| || || || || ||||| Sbjct 18659 TTTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTTTTGACAAATATCTGCAT 18605 Score = 136 bits (150), Expect = 3e-27 Identities = 173/236 (73%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| |||| || | || |||| |||||| || |||||| ||||||||||| Sbjct 19750 TTGCATTCCACCTCGGAGACGCAGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTA 19691 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||||| | | | | || |||| |||||| |||||||||||||| | |||||| || Sbjct 19690 ATCGGCTAATGTCCTTCCATCTTCCAACTGCTTTCCGGCAAAGATCAACCTCTGCTGGTC 19631 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281 || || | |||||| || ||| || || ||| || ||| | |||||||| | Sbjct 19630 TGGTGGAATACCTTCTTTGTCCTGAATTTTGGCCTTAACATTGT--CAATGGTGTCAGAA 19573 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||| | || || ||||| || || | ||||||||| ||||||||||| Sbjct 19572 CTTTCCACCTCAAGGGTGATTGTCTTGCCAGTCAAGGTCTTCACAAAGATTTGCAT 19517 Score = 132 bits (146), Expect = 3e-26 Identities = 174/237 (73%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| || | || | | ||||| |||||| || ||||| ||||||||||| Sbjct 19294 TTGCATTCCACCACGAAGACGGAGCACCAAGTGAAGRGTTGATTCCTTYTGGATGTTGTA 19235 Query 44164 ATCGGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 ||| || || || || |||| || |||||||| |||||||||||||| | |||||| Sbjct 19234 ATCAGCAAG--GGTCCTGCCGTCCTCAAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGG 19177 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGC 44280 |||| || | |||||||| ||| ||||| |||| || || | || ||||||| Sbjct 19176 TCTGGGGGAATGCCTTCCTTGTCCTGGATCTT-GGCTTTAACATTGTCAATAGTGTCGGA 19118 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||| ||||| | || || |||||||| || | |||||||| || |||||||| Sbjct 19117 GCTTTCAACCTCAAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACAAAAATTTGCAT 19061 Score = 132 bits (146), Expect = 3e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || |||||| |||||||| ||||| || || || |||| || Sbjct 19497 ACCAAGTGAAGGGTTGACTCCTTCTGGATGTTATAATCAGCAAGGGTCCGGCCGTCCTCA 19438 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| |||||||||||||| | |||||| |||| || | |||||||| ||| Sbjct 19437 AGCTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCTGGTGGAATGCCTTCCTTGTCCTGG 19378 Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| |||| || || | || ||||||| | ||| ||||| | || || ||||| Sbjct 19377 ATCTT-GGCTTTAACATTGTCAATAGTGTCGGAGCTTTCAACCTCAAGGGTGATGGTCTT 19319 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || | ||||||||| || |||||||| Sbjct 19318 TCCGGTCAAGGTCTTCACAAAAATTTGCAT 19289 Score = 129 bits (142), Expect = 4e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || || || |||||||| || ||||| || ||||| || || |||||||| Sbjct 19975 CATACCTCCCCTGAGCCTCAACACAAGATGAAGGGTTGATTCCTTCTGAATATTGTAATC 19916 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 ||| | | | | || |||| |||||| || ||||| ||||| | ||||| |||| Sbjct 19915 GGCTAATGTCCTTCCATCTTCCAACTGCTTGCCAGCAAAAATCAACCTTTGCTGGTCTGG 19856 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||| || || ||| ||||| ||| | | | |||||||||| | ||| Sbjct 19855 TGGGATACCCTCTTTGTCCTGAATCTTGGCCTTTACGTTGTCAATGGTGTCGGAGCTTTC 19796 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| | ||||| ||||| || || | ||||||||||||||||||||| Sbjct 19795 CACCTCAAGGGTAATAGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCAT 19745 Score = 125 bits (138), Expect = 5e-24 Identities = 173/238 (73%), Gaps = 8/238 (3%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| || | || | | ||||| |||||| || ||||| ||||||||||| Sbjct 19066 TTGCATTCCACCACGAAGACGGAGCACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGTA 19007 Query 44164 ATCGGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 ||| || || || || |||| || |||||||| || ||||||||||| | |||||| Sbjct 19006 ATCAGCAAG--GGTCCTGCCGTCCTCAAGCTGCTTTCCCGCAAAGATCAATCTCTGCTGG 18949 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGG 44279 |||| || | |||||||| ||| ||||| ||| || ||| | |||||||| | Sbjct 18948 TCTGGGGGAATGCCTTCCTTGTCCTGGATCTTAGCCTTAACATTGT--CAATGGTGTCAG 18891 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||| ||||| | || || |||||||| || | || |||||||| |||||||| Sbjct 18890 AGCTTTCAACCTCAAGGGTGATGGTCTTTCCTGTCAAAGTTTTCACGAAAATTTGCAT 18833 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||||||||||||||| || || || | | || || ||||||||||| ||||| Sbjct 20164 CTCCTTTTGGATGTTGTAGTCCGCCAGAGTCCTTCCATCTTCAAGCTGCTTCCCTGCAAA 20105 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||||| | |||||| || | || | || ||||| ||| ||||| ||||| | Sbjct 20104 GATCAGTCTCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGAATCTTAGCCTTCACATT 20045 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | ||||| || | |||||||||| || || || || || || | ||||||||| Sbjct 20044 GTCAATGGTATCAGAACTCTCCACCTCCAAAGTTATGGTTTTCCCAGTCAAGGTCTTCAC 19985 Query 44326 GAAGATTTGCAT 44337 || || ||||| Sbjct 19984 AAAAATCTGCAT 19973 >seq558 Length=67963 Score = 127 bits (140), Expect = 1e-24 Identities = 156/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| |||||| ||||||||||| || || || || | || || Sbjct 17110 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGCGTTCGGCCATCCTCG 17169 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| || ||||| |||||||| |||| || | |||||||| || Sbjct 17170 AGCTGCTTACCGGCGAAAATCAATCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCTTGA 17229 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | |||||||| | || || ||||| | ||||| |||| Sbjct 17230 ATCTTAGCCTTAACATTGT--CAATGGTGTCTGATGACTCTACCTCTAAGGTAATAGTCT 17287 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||| ||||||||||| ||||| ||||| Sbjct 17288 TGCCCGTCAGGGTCTTCACAAAGATCTGCAT 17318 Score = 125 bits (138), Expect = 5e-24 Identities = 156/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || ||| ||||| ||||||||||| || || || || | || || Sbjct 63843 CACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCTAGCGTTCGGCCATCCTC 63784 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || ||||| ||||| | |||||| |||| || | |||||||| ||| Sbjct 63783 AAGCTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTG 63724 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | |||||||| | || || ||||| | ||||| ||| Sbjct 63723 AATCTTAGCCTTAACATTGT--CAATGGTGTCTGATGACTCTACCTCTAAGGTAATAGTC 63666 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||||||||| ||||| ||||| Sbjct 63665 TTGCCCGTTAGGGTCTTCACAAAGATCTGCAT 63634 >seq545 Length=31085 Score = 116 bits (128), Expect = 3e-21 Identities = 168/235 (71%), Gaps = 6/235 (3%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||| | ||||||||| || || || |||||| ||||||||||| || Sbjct 3327 CATCCCTCCTCTCAAACGCAACACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTC 3268 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || | | | || || || || || || ||||||||||||||||| || |||| Sbjct 3267 TGCAAGAGTCCTCCCRTCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGG 3208 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGA 44283 || | ||| ||||| || ||||| ||||| || ||| | ||||| || | Sbjct 3207 GGGAATACCCTCCTTGTCTTGAATCTT-TGCTTTCACATTGT--CAATGGTATCTGAACT 3151 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || ||||||| ||||| ||||| || || | ||||| || || ||||||||| Sbjct 3150 CTCAACCTCCAATGTAATTGTCTTCCCAGTCAAAGTCTTGACAAAAATTTGCATG 3096 Score = 114 bits (126), Expect = 9e-21 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||| ||||||||||||||||||||| || ||| || | || || Sbjct 2621 ACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCATCTTCA 2562 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| ||||| |||||||||| | |||||| |||| || | ||||||||| | | | Sbjct 2561 AGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTGT-CTTG 2503 Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 | || |||| | || | |||||||| | | || ||||| | || || ||||| Sbjct 2502 AATTTTAGCTTTGACATTATCGATGGTGTCTGAGCTCTCGACCTCAAGAGTTATAGTCTT 2443 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || || || ||||||||||| Sbjct 2442 CCCGGTCAGAGTTTTAACAAAGATTTGCAT 2413 Score = 114 bits (126), Expect = 9e-21 Identities = 167/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||| | ||||||||| || || || |||||| ||||||||||| || Sbjct 3555 CATCCCTCCTCTCAAACGCAACACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTC 3496 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || | | | || || || || || || ||||||||||||||||| || |||| Sbjct 3495 TGCAAGAGTCCTCCCRTCCTCAAGWTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGG 3436 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGA 44283 || | ||| ||||| || ||||| ||||| || ||| | ||||| || | Sbjct 3435 GGGAATACCCTCCTTGTCTTGAATCTT-TGCTTTCACATTGT--CAATGGTATCTGAACT 3379 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||| || || ||||| || || | |||||||| ||||| ||||| Sbjct 3378 CTCAACCTCCAATGTGATTGTCTTCCCAGTCAAAGTCTTCACAAAGATCTGCAT 3325 Score = 113 bits (124), Expect = 3e-20 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| || ||| ||||||||||||||||| || ||| || | || || Sbjct 2165 ACAAGRTGAAGGGTAGACTCTTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCATCTTCA 2106 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| ||||| |||||||||| | ||||||||||| ||| | |||||||| || Sbjct 2105 AGCTGTTTCCCAGCAAAGATCAGTCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGA 2046 Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| |||| | || | |||||||| | || ||||| | || || ||||| Sbjct 2045 ATCTT-AGCTTTGACATTATCAATGGTGTCAGAACTCTCGACCTCAAGAGTGATGGTCTT 1987 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||| ||||| || || || ||||| Sbjct 1986 TCCGGTGAGTGTCTTAACAAATATCTGCAT 1957 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || ||| ||||||||||||||||| || ||| || | || || Sbjct 2393 ACAAGGTGAAGGGTAGACTCTTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCATCTTCA 2334 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| ||||| |||||||||| | |||||| |||| || | ||||||||| | | | Sbjct 2333 AGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTGT-CTTG 2275 Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 | || |||| | || | |||||||| | | || ||||| | || || ||||| Sbjct 2274 AATTTTAGCTTTGACATTATCGATGGTGTCTGAGCTCTCGACCTCAAGAGTTATAGTCTT 2215 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || || || ||||||||||| Sbjct 2214 CCCGGTCAGAGTTTTAACAAAGATTTGCAT 2185 Score = 89.7 bits (98), Expect = 4e-13 Identities = 165/239 (69%), Gaps = 5/239 (2%) Strand=Plus/Minus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || || ||||||| | || || || | || ||| || || || || Sbjct 2877 TATTTGCATGCCACCCCTCAGTCGAAGAACAAGATGTAAGGTAGACTCTTTCTGAATATT 2818 Query 44161 GTAATCGGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGC 44218 ||| || || || || || | || || || ||||| ||||||||||||| | |||| Sbjct 2817 GTAGTCAGCCAG--GGTCCTTCCATCCTCAAGTTGCTTGCCGGCAAAGATCAGTCTCTGC 2760 Query 44219 TGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCG 44278 || |||| ||| | |||||||| ||| || || ||||| | | ||||| ||| Sbjct 2759 TGGTCTGGAGGAATCCCTTCCTTGTCCTGAATTTTGGCCTTCACGTTGTCAATGGTATCG 2700 Query 44279 GCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||| || || | || || |||||||| || || ||||| || ||||| ||||| Sbjct 2699 GAACTTTCAACTTCAAGGGTGATGGTCTTTCCAGTAAGTGTCTTGACAAAGATCTGCAT 2641 Score = 89.7 bits (98), Expect = 4e-13 Identities = 163/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| || | | || ||||| || || || || || |||||||| Sbjct 3102 TTGCATGCCACCTCTAAGGCGAAGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTA 3043 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| || | | | || || || ||||| || ||||||||||| | |||||| || Sbjct 3042 ATCTGCCAACGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGGTC 2983 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGG 44282 || ||| | ||| ||||| || ||||| ||||| || || | ||||| || | Sbjct 2982 TGGAGGAATACCCTCCTTGTCTTGGATCTT-TGCTTTAACATTGTCGATGGTATCTGAAC 2924 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || ||||||| ||||| ||||| || || | ||||| || || ||||||||| Sbjct 2923 TCTCAACCTCCAAAGTAATTGTCTTCCCTGTCAATGTCTTGACAAATATTTGCATG 2868 >seq30006 Length=21699 Score = 113 bits (124), Expect = 3e-20 Identities = 144/194 (74%), Gaps = 7/194 (4%) Strand=Plus/Minus Query 44148 CCTTT-TGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||| || ||||||||||| || || || | || || |||||||| ||||| ||| Sbjct 12894 CCTTTCTGAATGTTGTAATCAGCTAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCGAAG 12835 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT---CAAT 44263 ||||| |||||||| || | || | ||||||||| || ||||| |||| || | Sbjct 12834 ATCAATCGCTGCTGGTCCGGTGGAATACCTTCCTTGTCTTGAATCTT-AGCTTTGACATT 12776 Query 44264 GTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323 || | || |||||| ||||| || || | ||| |||||||| ||||| || || ||| Sbjct 12775 GT--CAATAGTGTCGCTTGATTCAACTTCAAGCGTGATCGTCTTCCCCGTAAGAGTTTTC 12718 Query 44324 ACGAAGATTTGCAT 44337 |||||||| ||||| Sbjct 12717 ACGAAGATCTGCAT 12704 >seq544 Length=28317 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/197 (72%), Gaps = 8/197 (4%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCA 44203 ||| | ||||||||||||||| || | ||| | || | || || ||||| ||||| ||| Sbjct 22253 CTCGTCTTGGATGTTGTAATCAGCAATTGTTTG-GC-CATCTTCAAGCTGTTTCCCAGCA 22310 Query 44204 AAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAAT 44263 |||||||| | | ||||||||| ||| | |||||||| || ||||| |||| | Sbjct 22311 AAGATCAACCTCCGCTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTT-AGCTTTTAC 22369 Query 44264 GTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTT 44322 || | || ||||| | | || ||||| | || || |||||||| |||| ||||| Sbjct 22370 ATTATCAATAGTGTCAGAGCTCTCGACCTCAAGAGTGATGGTCTTTCCGATGAGCGTCTT 22429 Query 44323 --CACGAAGATTTGCAT 44337 || || || ||||| Sbjct 22430 AAAACAAATATCTGCAT 22446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359801786404830