Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20habrochaites_20[genbank_20GCA_5F000577655.1_202014-02-21]
42,990 sequences; 724,284,658 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq3886 183 7e-41
seq796 181 3e-40
seq545 168 2e-36
seq16835 165 2e-35
seq30006 159 8e-34
seq558 125 2e-23
seq544 120 7e-22
seq572 114 3e-20
seq27111 105 2e-17
seq4902 104 6e-17
seq3956 100 7e-16
seq33078 91.5 4e-13
seq22775 84.2 5e-11
>seq3886
Length=20373
Score = 183 bits (202), Expect = 7e-41
Identities = 161/201 (80%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||||||||||||||| ||||| || |||||||| ||||||||||| || ||
Sbjct 14134 CAGATCTTCGTGAAAACTCTCACCGGAAAGACTATCACCCTAGAGGTGGAAAGTTCTGAT 14075
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || ||||| |||||||| ||||| || || || || ||||||
Sbjct 14074 ACAATCGACAACGTTAAGGCTAAGATCCAGGACAAGGAAGGGATTCCCCCTGATCAGCAA 14015
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| ||||||||||||||||| ||| | || || ||| ||||||| || ||||||||| ||
Sbjct 14014 AGGCTTATCTTCGCCGGAAAGCAGTTGGAGGACGGACGGACTCTAGCTGATTATAACATC 13955
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || || || || || |||
Sbjct 13954 CAGAAGGAGTCCACCCTCCAT 13934
Score = 150 bits (166), Expect = 4e-31
Identities = 157/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| ||||| || ||||| ||||| || ||||| | |||||||||||||| |||
Sbjct 13450 CAGATTTTTGTGAAGACCCTCACCGGAAAGACCATCACTTTGGAGGTGGAAAGCTCCGAC 13391
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || || ||||| |||||||| || ||||| || || ||||||||
Sbjct 13390 ACCATTGATAATGTTAAGGCTAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCAGCAG 13331
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | |||||||| || || |||||||| || || | || |||||||| || ||| ||
Sbjct 13330 AGGTTGATCTTCGCTGGTAAGCAGCTCGAGGACGGCCGCACCCTTGCCGACTACAACATC 13271
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || |||||
Sbjct 13270 CAGAAGGAGTCGACCCTTCACCTTGT 13245
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||||| || ||||| || ||||| | |||||||||||||| |||
Sbjct 13678 CAGATCTTCGTTAAGACTCTTACCGGAAAGACCATCACTTTGGAGGTGGAAAGCTCCGAC 13619
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| || ||||| ||||| || ||||| ||||| || ||||||||
Sbjct 13618 ACCATTGACAACGTGAAGGCTAAGATCCAGGATAAGGAAGGGATCCCCCCAGACCAGCAG 13559
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | |||||||| || || |||||||| ||||| | || | || || || ||| ||
Sbjct 13558 AGGTTGATCTTCGCTGGGAAGCAGCTCGAGGATGGCCGCACCTTAGCTGACTACAACATC 13499
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || ||||||||
Sbjct 13498 CAGAAGGAGTCTACCCTCCATCTTGT 13473
Score = 147 bits (162), Expect = 5e-30
Identities = 153/201 (76%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| ||||| || || || ||||| ||||| ||||| ||||||||||||
Sbjct 13906 CAGATCTTCGTGAAGACTCTTACGGGTAAGACGATTACCCTTGAGGTCGAAAGCTCAGAC 13847
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| ||||| ||||| || ||||| || || || ||||||||
Sbjct 13846 ACCATTGACAACGTCAAGGCTAAGATCCAGGATAAGGAAGGCATTCCCCCAGACCAGCAG 13787
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | ||||| || ||||| ||| | |||||||| | || || || || || ||| ||
Sbjct 13786 AGGTTGATCTTTGCAGGAAAGCAGTTGGAAGATGGCCGCACCCTAGCTGACTACAACATC 13727
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || || || || || |||
Sbjct 13726 CAGAAGGAGTCCACCCTCCAT 13706
Score = 132 bits (146), Expect = 1e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || | || || || || ||||| | |||||||| || || |||
Sbjct 12994 CAGATCTTTGTGAAGACCTTGACCGGGAAGACCATCACTTTGGAGGTGGAGAGTTCTGAC 12935
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || ||| |||||||||||||| || || ||||| || ||||||||
Sbjct 12934 ACCATCGACAATGTGAAAGCTAAGATTCAGGACAAGGAGGGGATCCCACCAGACCAGCAG 12875
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | |||||||| || || ||||| || ||||| | || ||||| || || || ||
Sbjct 12874 AGGTTGATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTTGCTGACTACAATATC 12815
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || ||||| |||||
Sbjct 12814 CAGAAGGAGTCTACCCTGCACCTTGT 12789
>seq796
Length=44438
Score = 181 bits (200), Expect = 3e-40
Identities = 164/205 (80%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||||||||||||| | |||||||| || |||||||| ||||| |||||||| |||
Sbjct 18836 CAAATTTTCGTGAAAACTTTGACAGGAAAGACCATCACCCTTGAGGTTGAAAGCTCTGAC 18895
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || || ||||| |||||||| ||||| || || || ||||||||
Sbjct 18896 ACCATTGACAATGTTAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAGCAG 18955
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || ||||| ||||| || || || ||||| ||||| ||||| ||| ||
Sbjct 18956 AGATTGATCTTTGCGGGAAAGCAGCTTGAGGACGGCAGGACCCTTGCTGATTACAACATC 19015
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || |||||||| || || ||||
Sbjct 19016 CAGAAGGAATCAACCCTTCA-CTTG 19039
Score = 181 bits (200), Expect = 3e-40
Identities = 171/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||| || | || || || || || ||||| |||||||||||||| |||
Sbjct 19748 CAAATCTTCGTGAAGACCTTGACTGGCAAGACTATTACCCTTGAGGTGGAAAGCTCCGAC 19807
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| || ||||||||||||||||| || ||||| || |||||||||
Sbjct 19808 ACCATTGACAACGTAAAGGCCAAGATTCAGGACAAAGAGGGTATCCCACCAGACCAGCAA 19867
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | || || || || || ||| | |||||||||||||| | |||||||| || |
Sbjct 19868 AGGTTGATTTTTGCTGGCAAGCAGTTGGAAGATGGAAGGACATTAGCCGATTACAATATT 19927
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|| || |||||||| || |||||||| ||||| |||||
Sbjct 19928 CAGAAGGAATCAACCCTTCATCTTGTGTTGAGGCTCAG 19965
Score = 172 bits (190), Expect = 1e-37
Identities = 162/205 (79%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || ||||| ||||| ||||| || |||||||| ||||||||||||||||||
Sbjct 18608 CAGATATTTGTCAAAACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAAAGCTCAGAC 18667
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| ||| ||||| |||||||| ||||| || || || ||||||||
Sbjct 18668 ACCATTGACAACGTTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAGCAG 18727
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| || || || ||||| |||||||| | || || |||||||| ||| |
Sbjct 18728 AGGCTGATCTTTGCGGGCAAGCAGCTTGAAGATGGCCGTACCCTCGCCGATTACAACATT 18787
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|||||||| || || || || ||||
Sbjct 18788 CAAAAAGAGTCCACTCTTCA-CTTG 18811
Score = 159 bits (176), Expect = 8e-34
Identities = 159/205 (78%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || ||||| || | || || || || |||||||| ||||||||||| || |||
Sbjct 19520 CAAATCTTTGTGAAGACCTTGACTGGCAAGACAATCACCCTTGAGGTGGAAAGTTCTGAC 19579
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || || || ||||||||||||||||| || || || ||||||||
Sbjct 19580 ACCATTGACAATGTTAAGGCCAAAATTCAGGACAAAGAAGGTATTCCACCAGACCAGCAG 19639
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | ||||| |||||||| ||| | |||||||||||||| | |||||||| ||| ||
Sbjct 19640 AGGTTGATCTTTGCCGGAAAGCAGTTGGAAGATGGAAGGACATTAGCCGATTACAACATC 19699
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || ||||| || || ||||
Sbjct 19700 CAGAAGGAGTCAACCCTTCA-CTTG 19723
Score = 159 bits (176), Expect = 8e-34
Identities = 159/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| ||||| || | || || ||||| || || | |||||||| || || ||
Sbjct 19976 CAGATTTTTGTGAAGACCTTGACTGGGAAAACCATAACTTTGGAGGTGGAGAGTTCTGAT 20035
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || || |||||||||||||| || |||||||| |||||||||||
Sbjct 20036 ACCATTGACAATGTGAAGGCTAAGATTCAGGACAAGGAGGGAATCCCACCGGACCAGCAG 20095
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| ||||| || || || ||||| ||||||||||||||||| || || || ||| ||
Sbjct 20096 AGACTGATCTTTGCAGGGAAGCAGCTTGAAGATGGAAGGACTCTGGCGGACTACAACATC 20155
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
||||| || || || |||| |||||
Sbjct 20156 CAAAAGGAGTCTACTTTGCACCTTGT 20181
>seq545
Length=31085
Score = 168 bits (186), Expect = 2e-36
Identities = 161/206 (78%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || |||||||| || || || || || || || ||||| || |||||||||
Sbjct 2188 CAAATCTTTGTTAAAACTCTGACCGGGAAGACTATAACTCTTGAGGTCGAGAGCTCAGAC 2247
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || |||||| || ||||| ||||| ||||| || || || ||||||||
Sbjct 2248 ACCATCGATAATGTCAAAGCTAAAATTCAAGACAAGGAAGGTATTCCCCCAGACCAGCAG 2307
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| || || |||||||| |||||||| | || ||||| ||||| ||| ||
Sbjct 2308 AGGCTGATCTTTGCTGGGAAACAGCTTGAAGATGGCCGAACACTTGCTGATTACAACATC 2367
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|||||||| || || || || |||||
Sbjct 2368 CAAAAAGAGTCTACCCTTCACCTTGT 2393
Score = 165 bits (182), Expect = 2e-35
Identities = 160/206 (78%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || |||||||| || || || || || || || ||||| || |||||||||
Sbjct 2416 CAAATCTTTGTTAAAACTCTGACCGGGAAGACTATAACTCTTGAGGTCGAGAGCTCAGAC 2475
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || |||||| || ||||| ||||| ||||| || || || ||||||||
Sbjct 2476 ACCATCGATAATGTCAAAGCTAAAATTCAAGACAAGGAAGGTATTCCCCCAGACCAGCAG 2535
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| || || |||||||| |||||||| | || ||||| ||||| ||| ||
Sbjct 2536 AGGCTGATCTTTGCTGGGAAACAGCTTGAAGATGGCCGAACACTTGCTGATTACAACATC 2595
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
||||| || || || || || |||||
Sbjct 2596 CAAAAGGAGTCCACCCTTCACCTTGT 2621
Score = 149 bits (164), Expect = 2e-30
Identities = 157/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || | ||||| || || || || | ||||| || || |||||
Sbjct 2872 CAAATATTTGTCAAGACATTGACAGGGAAGACAATTACTTTGGAGGTTGAGAGTTCAGAT 2931
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || ||| |||||| || ||||| || || || ||||| ||||||||
Sbjct 2932 ACCATCGACAATGTTAAAGCAAAGATCCAAGACAAGGAGGGTATTCCTCCAGACCAGCAG 2991
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || ||||| || || || ||||||||||| | || ||||| ||| |
Sbjct 2992 AGATTGATCTTTGCTGGAAAGCAACTTGAGGATGGAAGGACGTTGGCAGATTACAACATT 3051
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| ||||||||||| ||||| ||||||
Sbjct 3052 CAGAAAGAATCAACCCTGCACCTTGTT 3078
Score = 145 bits (160), Expect = 2e-29
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || || || ||||| || |||||||| || || ||||| || ||
Sbjct 2644 CAGATCTTTGTCAAGACACTTACTGGAAAGACCATCACCCTTGAAGTTGAAAGTTCCGAT 2703
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| || || ||||||||||| ||||| || ||||| ||||||||
Sbjct 2704 ACCATTGACAACGTGAAGGCCAAAATTCAGGACAAGGAAGGGATTCCTCCAGACCAGCAG 2763
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| ||||| ||||| || || || || ||||||||||| || || || || || |
Sbjct 2764 AGACTGATCTTTGCCGGCAAGCAACTTGAGGATGGAAGGACCCTGGCTGACTACAATATT 2823
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|| ||||| || || | ||||||||| | |||| ||
Sbjct 2824 CAGAAAGAGTCTACCTTACATCTTGTTCTTCGACTGAG 2861
Score = 138 bits (152), Expect = 3e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| || || ||| | || || || || || || | ||||| || || |||||
Sbjct 3100 CAAATTTTTGTCAAGACTTTGACTGGGAAGACAATTACATTGGAGGTTGAGAGTTCAGAT 3159
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || ||| ||||||||| ||||| || || || || || ||||| ||
Sbjct 3160 ACCATTGACAATGTGAAAGCAAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAACAG 3219
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || ||||| || || || || ||||||||||| || || ||| ||
Sbjct 3220 CGTTTGATCTTTGCTGGTAAACAACTTGAGGAYGGGAGGACTCTTGCAGACTACAACATC 3279
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| || || ||||| || ||||| || |||
Sbjct 3280 CAGAAGGAGTCAACTCTCCATCTGGTGTTG 3309
Score = 138 bits (152), Expect = 3e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| ||| | || || || || ||||| | ||||| || || |||||
Sbjct 3328 CAGATCTTTGTGAAGACTTTGACTGGGAAGACAATCACATTGGAGGTTGAGAGTTCAGAT 3387
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || ||| ||||||||| ||||| || || || || || ||||| ||
Sbjct 3388 ACCATTGACAATGTGAAAGCAAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAACAG 3447
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || ||||| || || || || ||||||||||| || || ||| ||
Sbjct 3448 CGTTTGATCTTTGCTGGTAAACAWCTTGAGGAYGGGAGGACTCTTGCAGACTACAACATC 3507
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| || || ||||| || ||||| || |||
Sbjct 3508 CAGAAGGAGTCAACTCTCCATCTGGTGTTG 3537
>seq16835
Length=8075
Score = 165 bits (182), Expect = 2e-35
Identities = 160/206 (78%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||||||||| || || || || ||||||||||| ||||| || || |||
Sbjct 7098 CAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACCCTAGAGGTTGAGTCTTCCGAC 7039
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || |||||| ||||| |||||||| ||||| || || || ||||||||
Sbjct 7038 ACCATCGACAATGTCAAAGCCAAGATCCAGGACAAGGAAGGGATTCCCCCAGACCAGCAG 6979
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || ||||||||||| ||||| || ||||| | ||||||||||| || ||| ||
Sbjct 6978 CGTTTGATTTTCGCCGGAAAGCAGCTTGAGGATGGTCGTACTCTTGCCGACTACAACATC 6919
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || ||||| ||
Sbjct 6918 CAGAAGGAGTCCACTCTCCATCTCGT 6893
>seq30006
Length=21699
Score = 159 bits (176), Expect = 8e-34
Identities = 156/199 (78%), Gaps = 9/199 (5%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA- 177973
||||||| | || |||||||||||||| || || || |||||||| || || || ||
Sbjct 12701 AAAATGC---AGATCTTCGTGAAAACTCTTACGGGGAAGACGATCACGCTTGAAGTTGAA 12757
Query 177974 --AAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCT 178031
|||| ||||| || || || |||||| |||||||| ||||| ||||| || ||
Sbjct 12758 TCAAGC---GACACTATTGACAATGTCAAAGCTAAGATTCAAGACAAGGAAGGTATTCCA 12814
Query 178032 CCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC 178091
||||||||||| ||| | |||||||||||||| ||||||||||||||| | ||||| ||
Sbjct 12815 CCGGACCAGCAGCGATTGATCTTCGCCGGAAAGCAGCTCGAAGATGGACGTACTCTAGCT 12874
Query 178092 GATTATAACGTCCAAAAAG 178110
||||| ||| | || ||||
Sbjct 12875 GATTACAACATTCAGAAAG 12893
>seq558
Length=67963
Score = 125 bits (138), Expect = 2e-23
Identities = 157/215 (73%), Gaps = 3/215 (1%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || || ||||| || || || || || || || ||| | ||||| ||
Sbjct 17321 AAAATGC---AGATCTTTGTGAAGACCCTGACGGGCAAGACTATTACCTTAGAGGTAGAG 17265
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||||||||||| || || || || |||||||| ||||| ||||| || || ||
Sbjct 17264 TCATCAGACACCATTGACAATGTTAAGGCTAAGATTCAAGACAAGGAAGGCATTCCACCA 17205
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|||||||| ||| | || |||||||| || |||||||| ||||| | || || || ||
Sbjct 17204 GACCAGCAGCGATTGATTTTCGCCGGTAAGCAGCTCGAGGATGGCCGAACGCTAGCTGAC 17145
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
|| ||| |||| || || || || || || |||||
Sbjct 17144 TACAACATCCAGAAGGAGTCCACCCTCCACCTTGT 17110
Score = 120 bits (132), Expect = 7e-22
Identities = 156/215 (73%), Gaps = 3/215 (1%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || || ||||| || || || || || || || ||| | ||||| ||
Sbjct 63631 AAAATGC---AGATCTTTGTGAAGACCCTAACGGGCAAGACTATTACCTTAGAGGTAGAG 63687
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||||||||||| || || || || |||||||||||||| ||||| ||||| ||
Sbjct 63688 TCATCAGACACCATTGACAATGTTAAGGCTAAGATTCAGGACAAGGAAGGCATCCCACCA 63747
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|||||||| | | || || || ||||| ||||| || ||||| | || || || ||
Sbjct 63748 GACCAGCAGAGGTTGATTTTTGCAGGAAAGCAGCTTGAGGATGGCCGAACGCTAGCTGAC 63807
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
|| ||| |||| || ||||| || || || |||||
Sbjct 63808 TACAACATCCAGAAGGAATCCACCCTCCACCTTGT 63842
>seq544
Length=28317
Score = 120 bits (132), Expect = 7e-22
Identities = 152/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || | ||||| || || || || | ||||| || || |||||
Sbjct 21843 CAAATATTTGTTAAGACATTGACAGGGAAGACAATTACTTTGGAGGTTGAGAGTTCAGAT 21784
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGA-ATCCCTCCGGACCAGCA 178042
|| ||| | || || ||| |||||| || ||||||| ||| || ||||| |||||||
Sbjct 21783 ACTATCAACAATGTTAAAGCAAAGATCCAAGACAAAGGAGGGTATTCCTCCAAACCAGCA 21724
Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102
|| | || || || ||| | || || |||||||||||||| | || ||||| ||| |
Sbjct 21723 GAGATTGATATTTGCTGGAGAGCAACTTGAAGATGGAAGGACCTTGGCAGATTACAACAT 21664
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTT 178130
|| ||| | ||||| ||||| ||||||
Sbjct 21663 TCAGAAACAGTCAACCCTGCACCTTGTT 21636
Score = 109 bits (120), Expect = 1e-18
Identities = 149/207 (72%), Gaps = 1/207 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || | || || ||||| || |||||||| || || ||||| |||||
Sbjct 22070 CAGATCTTTGTCAAGATACTTACTGGAAAGACCATCACCCTTGAAGTTGAAAGTTCAGAT 22011
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
| || || ||||| || || |||||||| || ||||| || |||| |||||| |
Sbjct 22010 ATAATTGACAACGTGAAGGCCAAAATTCAGGATAAGGAAGGGATTCCTCTAGACCAGAAG 21951
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| ||||| |||| || || || || ||||||||||| || || || || || |
Sbjct 21950 AGACTGATCTTT-CCGGCAAGCAACTTGAGGATGGAAGGACCCTGGCTGACTACAATATT 21892
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
| ||||| || || | |||||||||
Sbjct 21891 TAGAAAGAGTCCACTTTACATCTTGTT 21865
>seq572
Length=122185
Score = 114 bits (126), Expect = 3e-20
Identities = 104/131 (79%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 178011 CAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTC 178070
||||| |||||||| || ||||| || ||||| |||| || || || ||||||||| |
Sbjct 88082 CAGGATAAAGAAGGCATACCTCCTGATCAGCAGAGACTGATTTTTGCTGGAAAACAGTTG 88023
Query 178071 GAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130
|||||||| || || || || ||||| ||| | || ||||||||||| || || ||||||
Sbjct 88022 GAAGATGGGAGAACCCTCGCTGATTACAACATTCAGAAAGAATCAACTCTTCACCTTGTT 87963
Query 178131 TTGAGACTCAG 178141
|||| |||||
Sbjct 87962 CTGAGGCTCAG 87952
>seq27111
Length=23349
Score = 105 bits (116), Expect = 2e-17
Identities = 88/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 178032 CCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC 178091
||||||||||||||||| ||||| || || ||| |||| |||||||| | || || ||
Sbjct 6162 CCGGACCAGCAACGACTGATCTTTGCTGGTAAATAGCTTGAAGATGGGCGTACACTGGCG 6103
Query 178092 GATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|||||||| ||||||||||||| || || |||||| | ||||| |||
Sbjct 6102 GATTATAATATCCAAAAAGAATCGACTCTACATCTTTTCTTGAGGCTC 6055
>seq4902
Length=4857
Score = 104 bits (114), Expect = 6e-17
Identities = 148/205 (72%), Gaps = 5/205 (2%)
Strand=Plus/Minus
Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG--ACA 177984
|| |||||||||||||| || | ||||| || || || || || ||| |||| | |
Sbjct 1023 ATATTCGTGAAAACTCT-ACCAGTAAAACCATTACTCTGGATGTCGAA--TTCAGCAATA 967
Query 177985 CCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAAC 178044
| ||||| || | || ||||| || |||||||||| || |||||| |||||||||
Sbjct 966 CTATCGACAATGCTAAGGCCAAGATACAAGACAAAGAAGAAAACCCTCCAGACCAGCAAA 907
Query 178045 GACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCC 178104
| || || || || || || |||||||| ||||| || | || || || | | |||
Sbjct 906 GGCTGATTTTTGCTGGTAAGCAGCTCGAGGATGGCCTCACCTTGGCGGACTACAGCATCC 847
Query 178105 AAAAAGAATCAACACTGCATCTTGT 178129
| ||| ||||||| || ||||| ||
Sbjct 846 AGAAAAAATCAACTCTACATCTAGT 822
>seq3956
Length=148667
Score = 100 bits (110), Expect = 7e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || |||||||||| ||||| || || || || || ||| | || | ||
Sbjct 117979 CAAATCTTTGTTAAAACTCTCATTGGAAAGACCATTACTCTGGATGTGAAGAGTACCAAC 117920
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||| || || || ||| ||||||| | |||||||||||||| || | || || |||
Sbjct 117919 TCCATTGACAATGTTAAAGCAAAGATTGAAGACAAAGAAGGAATTCCCTCAGATCAACAA 117860
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | | | | |||||||| | | |||| || ||||| ||||| || |
Sbjct 117859 AGATTAGTATATGGTGGAAAACAATTTAAGGATGATCATACACTTGCTGATTACAATATT 117800
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||| || || ||| | |||||||| ||||| ||
Sbjct 117799 CAAAAGGAGTCTACAATTCATCTTGTCTTGAGTCT 117765
>seq33078
Length=8788
Score = 91.5 bits (100), Expect = 4e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 178032 CCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC 178091
||| ||||||||| ||| ||||| || || ||| |||| |||||||| | || || ||
Sbjct 1325 CCGTACCAGCAACAACTGATCTTTGCTGGTAAATAGCTTGAAGATGGGTGTACACTGGCG 1384
Query 178092 GATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|||||| | || ||||||||||||| ||||| ||||| |||| |||
Sbjct 1385 GATTATCATATCAAAAAAGAATCAACTCTGCACCTTGTCCTGAGGCTC 1432
>seq22775
Length=43394
Score = 84.2 bits (92), Expect = 5e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081
||| || || ||||||||||| ||||| ||||| || || |||||||| |||||||| |
Sbjct 14024 AGGTATTCCACCGGACCAGCAGCGACTGATCTTTGCTGGTAAACAGCTTGAAGATGGGCG 13965
Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAG 178110
|| || || |||||||| |||||||||
Sbjct 13964 TACACTGGCGGATTATAATATCCAAAAAG 13936
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203068173570060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |