Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20lycopersicum_20[refseq_20GCF_5F000188115.3_202014-10-16] 3,145 sequences; 823,786,402 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq10 82.4 7e-11 seq1 82.4 7e-11 >seq10 Length=65527505 Score = 82.4 bits (90), Expect = 7e-11 Identities = 121/168 (72%), Gaps = 4/168 (2%) Strand=Plus/Minus Query 26830 ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAAC 26889 ||||||| | | || ||| ||||||| ||||||||||| || || | ||||||| Sbjct 65066669 ACACCATTAACAATGTTAAAGCAAAGATTGAAGACAAAGAAGGAATTCCCTCAGATCAAC 65066610 Query 26890 AAAGACTCATTTACGGCGGCAAACAACTCGAAGATGAT-AGAAACGTCAGC-GACTATAA 26947 ||||| | | | || || |||||| | | |||||| | | || | || || || || Sbjct 65066609 AAAGATTAGTATTTGGTGGAAAACAATTTAAGGATGATCATACACTT--GCTGATTACAA 65066552 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||| || ||||| || ||||| ||| |||| ||| | ||||| Sbjct 65066551 TATTCAAAAGGAGTCTACAATTCATCTTGTCTTGAGTCTTTGTGGAGG 65066504 >seq1 Length=98543444 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | || || ||||| |||| || || |||||||| | || | || || Sbjct 57604105 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACCCTAGAGGTTGAGTCT 57604164 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 |||||||||||| | || ||| ||||| ||||| |||||||| || || || Sbjct 57604165 TCCGACACCATCGACAATGTGAAAGCCAAGATCCAGGACAAGGAAGGGATTCCCCCAGAC 57604224 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || | | |||| || ||| || || || || |||| | | | | |||||| Sbjct 57604225 CAGCAGCGTTTGATTTTCGCCGGAAAGCAGCTTGAGGATGGTCGTACTCTTGCCGACTAC 57604284 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || || || ||| ||||||| || || Sbjct 57604285 AACATCCAGAAGGAGTCCACTCTCCATCTCGTGCT 57604319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478643582584400