Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20lycopersicum_20[refseq_20GCF_5F000188115.3_202014-10-16]
3,145 sequences; 823,786,402 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq2 95.1 3e-14
>seq2
Length=55340444
Score = 95.1 bits (104), Expect = 3e-14
Identities = 123/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 22483 TTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTT 22542
|||||||| ||| | | || |||||| |||||||| |||||||| ||| ||
Sbjct 54781627 TTCGCGGAGCGTTTGGTGGCTTTTGCTTGTGTTGAAGGGATTTTCTTCAGCGGAAGCTTC 54781686
Query 22543 TGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAG 22602
||| | || |||||| | |||||||| | | ||||| || |||| || |||||||||
Sbjct 54781687 TGTTCGATATTTTGGTTGAAAAAACGGGGGTTAATGCCTGGATTAACCTTCTCAAATGAG 54781746
Query 22603 TTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATA 22652
|||||| |||| || ||| | || |||||||||||| |||| ||
Sbjct 54781747 TTAATTTCAAGAGACGAAGGTTTGCACTGTGATTTTGCGTGTTTGCTTTA 54781796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303301080959390
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |