Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20lycopersicum_20[refseq_20GCF_5F000188115.3_202014-10-16] 3,145 sequences; 823,786,402 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq11 100 2e-16 seq10 91.5 1e-13 >seq11 Length=56302525 Score = 100 bits (110), Expect = 2e-16 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || ||| | || ||||| | || || | || || ||| Sbjct 496333 ATGCAGATATTTGTTAAGACACTCACCGGAAAGACCATCACTCTTGAGGTTGAGAGTTCT 496392 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | |||||| |||||| ||||| |||||||| ||||| ||||| Sbjct 496393 GACACCATTGATAATGTCAAAGCTAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAG 496452 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGTCAGC-GATTATA 24168 ||||||||||| | | || || || || ||||||| | ||| || | || ||||| | Sbjct 496453 CAGAGACTGATCTTTGCTGGGAAACAGCTTGAAGATGGCCGAACACTT--GCTGATTACA 496510 Query 24169 ACATTCAAAAAGAATCTACAATTCAT 24194 |||| |||||||| ||||| ||||| Sbjct 496511 ACATCCAAAAAGAGTCTACCCTTCAT 496536 Score = 86.0 bits (94), Expect = 5e-12 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| | || ||||| | || || | || |||||| | Sbjct 496561 ATGCAAATCTTTGTTAAAACTCTGACCGGAAAGACTATAACTCTTGAGGTCGAGAGCTCA 496620 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | |||||| || ||| ||||| ||||| || || || || || Sbjct 496621 GACACCATCGATAATGTCAAAGCTAAAATTCAAGACAAGGAAGGTATTCCCCCAGACCAG 496680 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGTCAGC-GATTATA 24168 ||||| ||||| | | || || || || ||||||| | ||| || | || ||||| | Sbjct 496681 CAGAGGCTGATCTTTGCTGGGAAACAGCTTGAAGATGGCCGAACACTT--GCTGATTACA 496738 Query 24169 ACATTCAAAAAGAATCTACAATTCA 24193 |||| ||||| || || || |||| Sbjct 496739 ACATCCAAAAGGAGTCCACCCTTCA 496763 >seq10 Length=65527505 Score = 91.5 bits (100), Expect = 1e-13 Identities = 91/117 (78%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 24079 TTACC--GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCA 24136 ||||| || ||||||||||||||||| ||||| ||||||||||||| | || || || Sbjct 463941 TTACCAGGATAAAGAAGGCATACCTCCTGATCAGCAGAGACTGATTTTTGCTGGAAAACA 463882 Query 24137 ACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCA 24193 | | ||||||| |||| | | ||||| |||||||| |||||||| || |||| Sbjct 463881 ATTGGAAGATGGTAGAACCCTGGCTGATTACAACATTCAGAAAGAATCAACTCTTCA 463825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429919520687475